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MECHANISM OF AEROBIC & 
AN-AEROBIC 
BIODEGRADATION 
PRESENTED BY:- 
SUKHJEET KAUR 
M.Sc. BT(H)3SEM 
130181106 
10/5/2014 1
CONTENT 
Biodegradation 
Types 
Aerobic degradation 
Mechanism of aerobic degradation 
Anaerobic degradation 
Mechanism of anaerobic degradation 
Difference between aerobic and 
anaerobic 
10/5/2014 2
BIODEGRADATION 
Biodegradation is a natural and 
complex process of decomposition 
facilitated by biochemical reactions 
It is biological transformation of an 
complex organic material to simpler by 
micro organisms 
Biodegradable matter is generally 
organic material such as plant & 
animal matter 
10/5/2014 3
DEGRADATION TIME 
PRODUCT TIME TO DEGRADE 
APPLE CORE 1-2 months 
GENERAL PAPER 1-3 months 
CARDBOARD BOX 2 months 
COTTON CLOTH 5 months 
TIN CANS 50-100 months 
ALUMINIUM CANS 150-200 months 
10/5/2014 4
BIODEGRADEBILITY 
Very easily degradable 
Easily degradable 
Potentially degradable 
Very slowly degradable 
10/5/2014 5
TYPES 
AEROBIC BIODEGRADATION 
AN-AEROBIC BIODEGRADATION 
10/5/2014 6
AEROBIC 
BIODEGRADATION 
 It is the breakdown of organic 
contaminants by micro organism when 
oxygen is present 
 Organic contaminants are rapidly 
degraded under aerobic conditions by 
aerobic bacteria called aerobes 
10/5/2014 7
MECHANISM OF AEROBIC 
DEGRADATION 
10/5/2014 8
EXAMPLE:- 
GRAM NEGATIVE STRAINS GRAM POSITIVE STRAINS 
Pseudomonas spp. Nocardia spp. 
Flavobacterium spp. Mycobacterium spp. 
Xanthomonas spp. Arthrobacter spp. 
Acinetobacter spp. Bacillus spp. 
10/5/2014 9
AEROBIC DEGRADATION OF 
BIOPOLYMERS 
It mainly includes two steps: 
1.Complex organic compounds 
Exoenzyme 
action 
Simple adsorbable polymers 
2. Simple polymers 
respiration 
Basic elements + energy 
10/5/2014 10
AEROBIC BIODEGRADATION 
OF CARBOHYDRATES 
11 
Lignin, cellulose, hemicellulose, starch, 
glycogen 
Hydrolysis (by respective enzymes) 
Fructose, 
cellobiose,pentoses 
Pyruvate Fructose 1- 
phosphate 
Glucose 
glycolysis fructokinase 
glycolysis 
CO₂+ water+ energy +growth 
TCA cycle 
10/5/2014
12 
AEROBIC DEGRADATION OF LIPIDS 
Neutral fats, 
Phospholipids, 
Wax 
Fatty acids 
Fatty Acyl CoA 
β - oxidation 
Hydrolysis 
Lipases,phospholipas 
es 
Activation 
Acetyl coA 
TCA 
CYCLE 
CO₂+ water+ 
energy +growth 
10/5/2014
13 
AEROBIC DEGRADATION OF PROTEINS 
Proteins 
Hydrolysis (by Proteases) 
Aminoacid 
peptidases 
Carboxylic acids of 
AcetylCoA 
Arg,His,Glu,Pro 
Ala,Thr,Gly,Ser Phe,Tyr,Leu,Trp Phe,Tyr 
2-Oxo glutarate Pyruvate AcetoacetylCo 
A 
Fumarate 
CO₂+ water+ 
TCA cycle energy +growth 
10/5/2014
AEROBIC DEGRADATION OF 
HYDROCARBONS 
10/5/2014 14
DEGRADATION OF AROMATIC 
HYDROCARBONS 
It can be converted to the natural 
intermediates that is catechol and 
protocatechuate 
Some Gram negative bacteia have 
plasmids that encode enzymes for 
degradation of aromatics called TOL 
plasmids 
It mainly involves hydroxylation 
catalysed by dioxygenase 
10/5/2014 15
16 
Degradation 
of Aromatic 
hydrocarbon 
s 
10/5/2014
DEGRADATION OF 
TOULENE 
10/5/2014 17
AN-AEROBIC 
BIODEGRADATION 
Anaerobic digestion occurs when the 
anaerobic microbes are dominant over 
the aerobic microbes widely used to 
treat wastewater sludge and 
biodegradable waste because it 
provides volume and mass reduction 
e.g Clostridia, Eubacterium spp. 
10/5/2014 18
PROCESS 
There are four key biological and 
chemical stages of anaerobic 
degradation 
Hydrolysis 
Acidogenesis 
Acetogenesis 
Methanogenesis 
10/5/2014 19
STAGES 
10/5/2014 20
ORGANISMS INVOLVED 
Acedogenesis- 
Clostridium,Eubacterium,Ruminococc 
u 
Acetogenesis- 
Syntrophobacter wolanii 
Syntrophomonas wolfii 
Methanogenesis- Methanothrix 
 Methanosacenia 
10/5/2014 21
ANAEROBIC 
BIODEGRADATION OF 
CARBOHYDRATES 
22 
Lignin, cellulose, hemicellulose, starch, 
glycogen 
Hydrolysis (by respective enzymes) 
Monomers (Glucose, Pentoses, 
Cellobiose) 
Fermentation 
Formate, Butyrate, Lactate, etc 
Acetogenesis 
Acetate 
Methanogenesis 
Methane + CO2 
10/5/2014
ANAEROBIC DEGRADATION OF PROTEIN 
23 
Proteins 
Hydrolysis (by Proteases) 
Aminoacid 
Deamination 
Organic 
acids 
Fermentation 
Acetate 
NH 
3 
Formate, Butyrate, etc 
Acetogenesis 
Methanogenesis 
Methane + 
CO2 
10/5/2014
ANAEROBIC DEGRADATION OF 
LIPIDS 
24 
Neutral fats, 
Phospholipids 
Inositol, Glycerol, 
GlucosFeermentation 
Glycolipids Fatty Acids 
β- Oxidation 
Acetyl coA 
Acetat 
e Methanogenesis 
Methane + 
CO2 
10/5/2014
ANAEROBIC DEGRADATION 
OF AROMATIC 
HYDROCARBONS 
10/5/2014 25
ANAEROBIC DEGRADATION 
OF XENOBIOTICS 
10/5/2014 26
DEGRADATION OF 
HERBICIDES 
DIURON is a systemic herbicide 
derived from urea, relatively persistent 
in soil, 
half-lives from 90 to 180 days. 
It shows slight acute toxicity 
It is a likely carcinogen 
10/5/2014 27
Diuron has a very slow rate of natural 
hydrolysis in a neutral solution at 25 C 
However, when hydrolysis occurs the 
degradation in water solution is an 
irreversible reaction giving 3,4-DCA as 
the only product 
10/5/2014 28
ANAEROBIC DEGRADATION 
OF DIURON 
10/5/2014 29
Difference between aerobic and 
anaerobic biodegradation 
AEROBIC 
 Most rapid and fast 
degradation . 
 No pungent gas 
produced . 
 More expensive 
 Large disposable 
waste generated. 
 Microbes are 
Xanthomonas,Coma 
monas 
ANAEROBIC 
 Time consuming and 
slow 
 Pungent gas produced. 
 Less expensive 
 Less waste is 
generated 
 Clostridia ,Eubacteria 
etc. 
10/5/2014 30
REFERENCES 
Introduction to environmental 
biotechnology by A.K chatterji 
A text book of environmental 
biotechnology by Pradipta Mohaptra 
www.ensobottles.com/.../Aerobic%20 
Anaerobic%20Biodegradation 
10/5/2014 31

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Mechanism of aerobic & an aerobic biodegradation

  • 1. MECHANISM OF AEROBIC & AN-AEROBIC BIODEGRADATION PRESENTED BY:- SUKHJEET KAUR M.Sc. BT(H)3SEM 130181106 10/5/2014 1
  • 2. CONTENT Biodegradation Types Aerobic degradation Mechanism of aerobic degradation Anaerobic degradation Mechanism of anaerobic degradation Difference between aerobic and anaerobic 10/5/2014 2
  • 3. BIODEGRADATION Biodegradation is a natural and complex process of decomposition facilitated by biochemical reactions It is biological transformation of an complex organic material to simpler by micro organisms Biodegradable matter is generally organic material such as plant & animal matter 10/5/2014 3
  • 4. DEGRADATION TIME PRODUCT TIME TO DEGRADE APPLE CORE 1-2 months GENERAL PAPER 1-3 months CARDBOARD BOX 2 months COTTON CLOTH 5 months TIN CANS 50-100 months ALUMINIUM CANS 150-200 months 10/5/2014 4
  • 5. BIODEGRADEBILITY Very easily degradable Easily degradable Potentially degradable Very slowly degradable 10/5/2014 5
  • 6. TYPES AEROBIC BIODEGRADATION AN-AEROBIC BIODEGRADATION 10/5/2014 6
  • 7. AEROBIC BIODEGRADATION  It is the breakdown of organic contaminants by micro organism when oxygen is present  Organic contaminants are rapidly degraded under aerobic conditions by aerobic bacteria called aerobes 10/5/2014 7
  • 8. MECHANISM OF AEROBIC DEGRADATION 10/5/2014 8
  • 9. EXAMPLE:- GRAM NEGATIVE STRAINS GRAM POSITIVE STRAINS Pseudomonas spp. Nocardia spp. Flavobacterium spp. Mycobacterium spp. Xanthomonas spp. Arthrobacter spp. Acinetobacter spp. Bacillus spp. 10/5/2014 9
  • 10. AEROBIC DEGRADATION OF BIOPOLYMERS It mainly includes two steps: 1.Complex organic compounds Exoenzyme action Simple adsorbable polymers 2. Simple polymers respiration Basic elements + energy 10/5/2014 10
  • 11. AEROBIC BIODEGRADATION OF CARBOHYDRATES 11 Lignin, cellulose, hemicellulose, starch, glycogen Hydrolysis (by respective enzymes) Fructose, cellobiose,pentoses Pyruvate Fructose 1- phosphate Glucose glycolysis fructokinase glycolysis CO₂+ water+ energy +growth TCA cycle 10/5/2014
  • 12. 12 AEROBIC DEGRADATION OF LIPIDS Neutral fats, Phospholipids, Wax Fatty acids Fatty Acyl CoA β - oxidation Hydrolysis Lipases,phospholipas es Activation Acetyl coA TCA CYCLE CO₂+ water+ energy +growth 10/5/2014
  • 13. 13 AEROBIC DEGRADATION OF PROTEINS Proteins Hydrolysis (by Proteases) Aminoacid peptidases Carboxylic acids of AcetylCoA Arg,His,Glu,Pro Ala,Thr,Gly,Ser Phe,Tyr,Leu,Trp Phe,Tyr 2-Oxo glutarate Pyruvate AcetoacetylCo A Fumarate CO₂+ water+ TCA cycle energy +growth 10/5/2014
  • 14. AEROBIC DEGRADATION OF HYDROCARBONS 10/5/2014 14
  • 15. DEGRADATION OF AROMATIC HYDROCARBONS It can be converted to the natural intermediates that is catechol and protocatechuate Some Gram negative bacteia have plasmids that encode enzymes for degradation of aromatics called TOL plasmids It mainly involves hydroxylation catalysed by dioxygenase 10/5/2014 15
  • 16. 16 Degradation of Aromatic hydrocarbon s 10/5/2014
  • 17. DEGRADATION OF TOULENE 10/5/2014 17
  • 18. AN-AEROBIC BIODEGRADATION Anaerobic digestion occurs when the anaerobic microbes are dominant over the aerobic microbes widely used to treat wastewater sludge and biodegradable waste because it provides volume and mass reduction e.g Clostridia, Eubacterium spp. 10/5/2014 18
  • 19. PROCESS There are four key biological and chemical stages of anaerobic degradation Hydrolysis Acidogenesis Acetogenesis Methanogenesis 10/5/2014 19
  • 21. ORGANISMS INVOLVED Acedogenesis- Clostridium,Eubacterium,Ruminococc u Acetogenesis- Syntrophobacter wolanii Syntrophomonas wolfii Methanogenesis- Methanothrix  Methanosacenia 10/5/2014 21
  • 22. ANAEROBIC BIODEGRADATION OF CARBOHYDRATES 22 Lignin, cellulose, hemicellulose, starch, glycogen Hydrolysis (by respective enzymes) Monomers (Glucose, Pentoses, Cellobiose) Fermentation Formate, Butyrate, Lactate, etc Acetogenesis Acetate Methanogenesis Methane + CO2 10/5/2014
  • 23. ANAEROBIC DEGRADATION OF PROTEIN 23 Proteins Hydrolysis (by Proteases) Aminoacid Deamination Organic acids Fermentation Acetate NH 3 Formate, Butyrate, etc Acetogenesis Methanogenesis Methane + CO2 10/5/2014
  • 24. ANAEROBIC DEGRADATION OF LIPIDS 24 Neutral fats, Phospholipids Inositol, Glycerol, GlucosFeermentation Glycolipids Fatty Acids β- Oxidation Acetyl coA Acetat e Methanogenesis Methane + CO2 10/5/2014
  • 25. ANAEROBIC DEGRADATION OF AROMATIC HYDROCARBONS 10/5/2014 25
  • 26. ANAEROBIC DEGRADATION OF XENOBIOTICS 10/5/2014 26
  • 27. DEGRADATION OF HERBICIDES DIURON is a systemic herbicide derived from urea, relatively persistent in soil, half-lives from 90 to 180 days. It shows slight acute toxicity It is a likely carcinogen 10/5/2014 27
  • 28. Diuron has a very slow rate of natural hydrolysis in a neutral solution at 25 C However, when hydrolysis occurs the degradation in water solution is an irreversible reaction giving 3,4-DCA as the only product 10/5/2014 28
  • 29. ANAEROBIC DEGRADATION OF DIURON 10/5/2014 29
  • 30. Difference between aerobic and anaerobic biodegradation AEROBIC  Most rapid and fast degradation .  No pungent gas produced .  More expensive  Large disposable waste generated.  Microbes are Xanthomonas,Coma monas ANAEROBIC  Time consuming and slow  Pungent gas produced.  Less expensive  Less waste is generated  Clostridia ,Eubacteria etc. 10/5/2014 30
  • 31. REFERENCES Introduction to environmental biotechnology by A.K chatterji A text book of environmental biotechnology by Pradipta Mohaptra www.ensobottles.com/.../Aerobic%20 Anaerobic%20Biodegradation 10/5/2014 31

Editor's Notes

  • #17: But disadvantages…………are ..like……..high ..oxygen demand…… and……..large aeration tank capacity…..