File:Maximum-Likelihood-Tree of Lactarius blennius and relativs.svg

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Evolutionary relationships of Lactarius blennius
Figure. Molecular Phylogenetic anaylsis of by Maximum Likelihood method: The evolutionary history was inferred by Lactarius blennius using the Maximum Likelihood method based on the Tamura-Nei model. The tree with the highest log likelihood (-1630.1222) is shown. The percentage of trees in which the associated taxa clustered together is shown next to the branches. A Minimum Evolution tree was used as an initial tree in the heuristic search. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. The analysis involved 12 rRNA-gene nucleotide sequences, all obtained from the genbank. All positions with less than 95% site coverage were eliminated. That is, fewer than 5% alignment gaps, missing data, and ambiguous bases were allowed at any position. There were a total of 635 positions in the final dataset. Evolutionary analyses were conducted in MEGA5. Evolutionary analyses were conducted in MEGA5. The two Lactarius subdulcis sequences were used as outgroup. All sequences were aligned by the CustalW algorithm with standard settings.


List of the GenBank Sequences.

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I, the copyright holder of this work, hereby publish it under the following license:
Creative Commons CC-Zero This file is made available under the Creative Commons CC0 1.0 Universal Public Domain Dedication.
The person who associated a work with this deed has dedicated the work to the public domain by waiving all of their rights to the work worldwide under copyright law, including all related and neighboring rights, to the extent allowed by law. You can copy, modify, distribute and perform the work, even for commercial purposes, all without asking permission.

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current12:04, 22 June 2013Thumbnail for version as of 12:04, 22 June 2013713 × 304 (17 KB)Thkgk (talk | contribs)== {{int:filedesc}} == {{Information |Description='''Evolutionary relationships of ''Lactarius blennius'' '''<br/> '''Figure. Molecular Phylogenetic anaylsis of by Maximum Likelihood method:''' The evolutionary history was inferred by ''Lactarius blen...

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