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ORCIDJournal of Discrete Algorithms, Volume 9
Volume 9, Number 1, March 2011
- Gregory Kucherov
, Esko Ukkonen:
Editorial. 1 - Rolf Backofen, Gad M. Landau, Mathias Möhl, Dekel Tsur, Oren Weimann:
Fast RNA structure alignment for crossing input structures. 2-11 - Rolf Backofen, Dekel Tsur, Shay Zakov, Michal Ziv-Ukelson:
Sparse RNA folding: Time and space efficient algorithms. 12-31 - Matthias Bernt, Kuan-Yu Chen, Ming-Chiang Chen, An-Chiang Chu, Daniel Merkle, Hung-Lung Wang, Kun-Mao Chao, Martin Middendorf:
Finding all sorting tandem duplication random loss operations. 32-48 - Philip Bille:
Fast searching in packed strings. 49-56 - Jérémie Bourdon, Irena Rusu:
Statistical properties of factor oracles. 57-66 - Raphaël Clifford, Benjamin Sach:
Pattern matching in pseudo real-time. 67-81 - Riccardo Dondi, Guillaume Fertin, Stéphane Vialette:
Complexity issues in vertex-colored graph pattern matching. 82-99 - Andrzej Ehrenfeucht, Ross M. McConnell, Nissa Osheim, Sung-Whan Woo:
Position heaps: A simple and dynamic text indexing data structure. 100-121 - Christian Hundt, Maciej Liskiewicz:
New complexity bounds for image matching under rotation and scaling. 122-136 - Christian Komusiewicz, Rolf Niedermeier, Johannes Uhlmann:
Deconstructing intractability - A multivariate complexity analysis of interval constrained coloring. 137-151
Volume 9, Number 2, June 2011
- Stanislav Angelov, Shunsuke Inenaga, Teemu Kivioja, Veli Mäkinen:
Missing pattern discovery. 153-165 - Geoffrey Exoo, Brendan D. McKay, Wendy J. Myrvold, Jacqueline Nadon:
Computational determination of (3, 11) and (4, 7) cages. 166-169 - Johnny David, Zeev Nutov:
Approximating survivable networks with β-metric costs. 170-175 - Travis Gagie, Yakov Nekrich:
Tight bounds for online stable sorting. 176-181 - Mustaq Ahmed, Anil Maheshwari, Subhas C. Nandy, Sasanka Roy:
On the number of shortest descending paths on the surface of a convex terrain. 182-189 - Ilya Safro, Boris Temkin:
Multiscale approach for the network compression-friendly ordering. 190-202 - Stephan Dominique Andres, Winfried Hochstättler:
Some heuristics for the binary paint shop problem and their expected number of colour changes. 203-211
Volume 9, Number 3, September 2011
- Tiziana Calamoneri, Josep Díaz:
Editorial. 213 - Daniel Binkele-Raible, Ljiljana Brankovic, Marek Cygan, Henning Fernau, Joachim Kneis, Dieter Kratsch, Alexander Langer, Mathieu Liedloff, Marcin Pilipczuk, Peter Rossmanith, Jakub Onufry Wojtaszczyk:
Breaking the 2n-barrier for Irredundance: Two lines of attack. 214-230 - Leizhen Cai, Boting Yang:
Parameterized complexity of even/odd subgraph problems. 231-240 - Panagiotis Cheilaris, Géza Tóth:
Graph unique-maximum and conflict-free colorings. 241-251 - Faisal N. Abu-Khzam, Amer E. Mouawad, Mathieu Liedloff:
An exact algorithm for connected red-blue dominating set. 252-262 - Rahul Tripathi, Elena Valkanova, V. S. Anil Kumar:
On strategy improvement algorithms for simple stochastic games. 263-278 - Gianni Franceschini, Torben Hagerup:
Finding the maximum suffix with fewer comparisons. 279-286
- Prosenjit Bose, Paz Carmi, Mathieu Couture:
Spanners of additively weighted point sets. 287-298 - Marcin Kaminski, Daniël Paulusma, Dimitrios M. Thilikos:
Contracting planar graphs to contractions of triangulations. 299-306 - Pedro Reviriego, Lars Holst, Juan Antonio Maestro:
On the expected longest length probe sequence for hashing with separate chaining. 307-312
Volume 9, Number 4, December 2011
- Moshe Lewenstein, Gabriel Valiente:
CPM 2006. 313
- Martin Kutz, Gerth Stølting Brodal, Kanela Kaligosi, Irit Katriel:
Faster algorithms for computing longest common increasing subsequences. 314-325 - Carl Kingsford, Elena Zaslavsky, Mona Singh:
A cost-aggregating integer linear program for motif finding. 326-334 - Patricia A. Evans:
Finding common RNA pseudoknot structures in polynomial time. 335-343 - Michal Ozery-Flato, Ron Shamir:
An O(n3/2sqrt(log(n))) algorithm for sorting by reciprocal translocations. 344-357 - Ho-Leung Chan, Tak Wah Lam, Wing-Kin Sung, Siu-Lung Tam, Swee-Seong Wong:
A linear size index for approximate pattern matching. 358-364 - Marcin Kubica, Romeo Rizzi, Stéphane Vialette, Tomasz Walen:
Approximation of RNA multiple structural alignment. 365-376
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