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2020 – today
- 2024
[j12]Simona Bottani, Elina Thibeau-Sutre, Aurélien Maire, Sebastian Ströer, Didier Dormont, Olivier Colliot, Ninon Burgos:
Contrast-enhanced to non-contrast-enhanced image translation to exploit a clinical data warehouse of T1-weighted brain MRI. BMC Medical Imaging 24(1): 67 (2024)- [j11]Sophie Loizillon
, Simona Bottani, Aurélien Maire, Sebastian Ströer, Didier Dormont, Olivier Colliot, Ninon Burgos:
Automatic motion artefact detection in brain T1-weighted magnetic resonance images from a clinical data warehouse using synthetic data. Medical Image Anal. 93: 103073 (2024) - [i6]Sophie Loizillon, Simona Bottani, Stéphane Mabille, Yannick Jacob, Aurélien Maire, Sebastian Ströer, Didier Dormont, Olivier Colliot, Ninon Burgos:
Automated MRI Quality Assessment of Brain T1-weighted MRI in Clinical Data Warehouses: A Transfer Learning Approach Relying on Artefact Simulation. CoRR abs/2406.12448 (2024) - 2023
- [j10]Simona Bottani, Ninon Burgos, Aurélien Maire, Dario Saracino, Sebastian Ströer, Didier Dormont, Olivier Colliot:
Evaluation of MRI-based machine learning approaches for computer-aided diagnosis of dementia in a clinical data warehouse. Medical Image Anal. 89: 102903 (2023) - [c4]Ravi Hassanaly, Simona Bottani, Benoît Sauty, Olivier Colliot, Ninon Burgos:
Simulation based evaluation framework for deep learning unsupervised anomaly detection on brain FDG-PET. Medical Imaging: Image Processing 2023 - [c3]Sophie Loizillon, Simona Bottani, Aurélien Maire, Sebastian Ströer, Didier Dormont, Olivier Colliot, Ninon Burgos:
Transfer learning from synthetic to routine clinical data for motion artefact detection in brain T1-weighted MRI. Medical Imaging: Image Processing 2023 - 2022
- [b1]Simona Bottani:
Machine learning for neuroimaging using a very large scale clinical datawarehouse. (Apprentissage automatique pour la neuro-imagerie à l'aide d'un entrepôt de données cliniques à très grande échelle). Sorbonne University, Paris, France, 2022 - [j9]Simona Bottani, Ninon Burgos, Aurélien Maire, Adam Wild, Sebastian Ströer, Didier Dormont, Olivier Colliot:
Automatic quality control of brain T1-weighted magnetic resonance images for a clinical data warehouse. Medical Image Anal. 75: 102219 (2022) - [c2]Simona Bottani, Elina Thibeau-Sutre, Aurélien Maire, Sebastian Ströer, Didier Dormont, Olivier Colliot, Ninon Burgos:
Homogenization of brain MRI from a clinical data warehouse using contrast-enhanced to non-contrast-enhanced image translation with U-Net derived models. Medical Imaging: Image Processing 2022 - 2021
- [j8]Ninon Burgos, Simona Bottani, Johann Faouzi, Elina Thibeau-Sutre, Olivier Colliot:
Deep learning for brain disorders: from data processing to disease treatment. Briefings Bioinform. 22(2): 1560-1576 (2021) - [j7]Alexandre Routier, Ninon Burgos, Mauricio Diaz-Melo, Michael Bacci, Simona Bottani, Omar El-Rifai, Sabrina Fontanella, Pietro Gori, Jérémy Guillon, Alexis Guyot, Ravi Hassanaly, Thomas Jacquemont, Pascal Lu, Arnaud Marcoux, Tristan Moreau, Jorge Samper-González, Marc Teichmann, Elina Thibeau-Sutre, Ghislain Vaillant, Junhao Wen, Adam Wild, Marie Odile Habert, Stanley Durrleman, Olivier Colliot:
Clinica: An Open-Source Software Platform for Reproducible Clinical Neuroscience Studies. Frontiers Neuroinformatics 15: 689675 (2021) - [j6]Manon Ansart, Stéphane Epelbaum, Giulia Bassignana, Alexandre Bône, Simona Bottani, Tiziana Cattai, Raphaël Couronné, Johann Faouzi, Igor Koval, Maxime Louis, Elina Thibeau-Sutre, Junhao Wen, Adam Wild, Ninon Burgos, Didier Dormont, Olivier Colliot, Stanley Durrleman:
Predicting the progression of mild cognitive impairment using machine learning: A systematic, quantitative and critical review. Medical Image Anal. 67: 101848 (2021) - [j5]Junhao Wen, Jorge Samper-González, Simona Bottani, Alexandre Routier, Ninon Burgos, Thomas Jacquemont, Sabrina Fontanella, Stanley Durrleman, Stéphane Epelbaum, Anne Bertrand, Olivier Colliot:
Reproducible Evaluation of Diffusion MRI Features for Automatic Classification of Patients with Alzheimer's Disease. Neuroinformatics 19(1): 57-78 (2021) - [j4]Thomas Lartigue, Simona Bottani, Stephanie Baron, Olivier Colliot, Stanley Durrleman, Stéphanie Allassonnière:
Gaussian Graphical Model Exploration and Selection in High Dimension Low Sample Size Setting. IEEE Trans. Pattern Anal. Mach. Intell. 43(9): 3196-3213 (2021) - [i5]Simona Bottani, Ninon Burgos, Aurélien Maire, Adam Wild, Sebastian Ströer, Didier Dormont, Olivier Colliot:
Automatic quality control of brain T1-weighted magnetic resonance images for a clinical data warehouse. CoRR abs/2104.08131 (2021) - 2020
- [j3]Junhao Wen, Elina Thibeau-Sutre, Mauricio Diaz-Melo, Jorge Samper-González, Alexandre Routier, Simona Bottani, Didier Dormont, Stanley Durrleman, Ninon Burgos, Olivier Colliot:
Convolutional neural networks for classification of Alzheimer's disease: Overview and reproducible evaluation. Medical Image Anal. 63: 101694 (2020) - [i4]Thomas Lartigue, Simona Bottani, Stephanie Baron, Olivier Colliot, Stanley Durrleman, Stéphanie Allassonnière:
Gaussian Graphical Model exploration and selection in high dimension low sample size setting. CoRR abs/2003.05169 (2020)
2010 – 2019
- 2019
- [c1]Jorge Samper-González, Ninon Burgos, Simona Bottani, Marie Odile Habert, Theodoros Evgeniou, Stéphane Epelbaum, Olivier Colliot:
Reproducible evaluation of methods for predicting progression to Alzheimer's disease from clinical and neuroimaging data. Medical Imaging: Image Processing 2019: 109490V - [i3]Junhao Wen, Elina Thibeau-Sutre, Jorge Samper-González, Alexandre Routier, Simona Bottani, Stanley Durrleman, Ninon Burgos, Olivier Colliot:
Convolutional Neural Networks for Classification of Alzheimer's Disease: Overview and Reproducible Evaluation. CoRR abs/1904.07773 (2019) - 2018
- [j2]Arnaud Marcoux, Ninon Burgos, Anne Bertrand, Marc Teichmann, Alexandre Routier, Junhao Wen, Jorge Samper-González, Simona Bottani, Stanley Durrleman, Marie Odile Habert, Olivier Colliot:
An Automated Pipeline for the Analysis of PET Data on the Cortical Surface. Frontiers Neuroinformatics 12: 94 (2018) - [j1]Jorge Samper-González, Ninon Burgos, Simona Bottani, Sabrina Fontanella, Pascal Lu, Arnaud Marcoux, Alexandre Routier, Jérémy Guillon, Michael Bacci, Junhao Wen, Anne Bertrand, Hugo Bertin, Marie Odile Habert, Stanley Durrleman, Theodoros Evgeniou, Olivier Colliot:
Reproducible evaluation of classification methods in Alzheimer's disease: Framework and application to MRI and PET data. NeuroImage 183: 504-521 (2018) - [i2]Jorge Samper-González, Ninon Burgos, Simona Bottani, Sabrina Fontanella, Pascal Lu, Arnaud Marcoux, Alexandre Routier, Jérémy Guillon, Michael Bacci, Junhao Wen, Anne Bertrand, Hugo Bertin, Marie Odile Habert, Stanley Durrleman, Theodoros Evgeniou, Olivier Colliot, Alzheimer's Disease Neuroimaging Initiative:
Reproducible evaluation of classification methods in Alzheimer's disease: framework and application to MRI and PET data. CoRR abs/1808.06452 (2018) - [i1]Junhao Wen, Jorge Samper-González, Simona Bottani, Alexandre Routier, Ninon Burgos, Thomas Jacquemont, Sabrina Fontanella, Stanley Durrleman, Stéphane Epelbaum, Anne Bertrand, Olivier Colliot:
Reproducible evaluation of diffusion MRI features for automatic classification of patients with Alzheimers disease. CoRR abs/1812.11183 (2018)
Coauthor Index
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