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2020 – today
- 2022
[j38]Omar Awile, Pramod S. Kumbhar, Nicolas Cornu, Salvador Dura-Bernal
, James Gonzalo King, Olli Lupton, Ioannis Magkanaris, Robert A. McDougal, Adam J. H. Newton, Fernando Pereira, Alexandru Savulescu, Nicholas T. Carnevale, William W. Lytton, Michael L. Hines, Felix Schürmann:
Modernizing the NEURON Simulator for Sustainability, Portability, and Performance. Frontiers Neuroinformatics 16 (2022)- 2020
- [c10]Pramod S. Kumbhar, Omar Awile, Liam Keegan, Jorge Blanco Alonso, James Gonzalo King, Michael L. Hines, Felix Schürmann:
An Optimizing Multi-platform Source-to-source Compiler Framework for the NEURON MODeling Language. ICCS (1) 2020: 45-58 - [c9]Bruno R. C. Magalhães, Michael L. Hines, Thomas Sterling, Felix Schürmann:
Fully-Asynchronous Fully-Implicit Variable-Order Variable-Timestep Simulation of Neural Networks. ICCS (5) 2020: 94-108
2010 – 2019
- 2019
- [j37]Bruno R. C. Magalhães, Thomas Sterling, Michael L. Hines, Felix Schürmann:
Asynchronous Branch-Parallel Simulation of Detailed Neuron Models. Frontiers Neuroinformatics 13: 54 (2019) - [j36]Pramod S. Kumbhar, Michael L. Hines, Jeremy Fouriaux, Aleksandr Ovcharenko, James Gonzalo King, Fabien Delalondre, Felix Schürmann:
CoreNEURON : An Optimized Compute Engine for the NEURON Simulator. Frontiers Neuroinformatics 13: 63 (2019) - [c8]Bruno R. C. Magalhães, Thomas Sterling, Michael L. Hines, Felix Schürmann:
Fully-Asynchronous Cache-Efficient Simulation of Detailed Neural Networks. ICCS (3) 2019: 421-434 - [c7]Bruno R. C. Magalhães, Thomas Sterling, Felix Schürmann, Michael L. Hines:
Exploiting Flow Graph of System of ODEs to Accelerate the Simulation of Biologically-Detailed Neural Networks. IPDPS 2019: 176-187 - [i2]Pramod S. Kumbhar, Omar Awile, Liam Keegan, Jorge Blanco Alonso, James Gonzalo King, Michael L. Hines, Felix Schürmann:
An optimizing multi-platform source-to-source compiler framework for the NEURON MODeling Language. CoRR abs/1905.02241 (2019) - [i1]Bruno R. C. Magalhães, Michael L. Hines, Thomas Sterling, Felix Schürmann:
Fully-Asynchronous Fully-Implicit Variable-Order Variable-Timestep Simulation of Neural Networks. CoRR abs/1907.00670 (2019) - 2018
- [j35]Adam J. H. Newton, Robert A. McDougal, Michael L. Hines, William W. Lytton:
Using NEURON for Reaction-Diffusion Modeling of Extracellular Dynamics. Frontiers Neuroinformatics 12: 41 (2018) - [j34]Inga Blundell, Romain Brette, Thomas A. Cleland, Thomas G. Close, Daniel Coca, Andrew P. Davison, Sandra Diaz-Pier, Carlos Fernandez Musoles, Padraig Gleeson, Dan F. M. Goodman, Michael L. Hines, Michael W. Hopkins, Pramod S. Kumbhar, David R. Lester, Bóris Marin, Abigail Morrison, Eric Müller, Thomas Nowotny, Alexander Peyser, Dimitri Plotnikov, Paul Richmond, Andrew Rowley, Bernhard Rumpe, Marcel Stimberg, Alan B. Stokes, Adam R. Tomkins, Guido Trensch, Michael Marmaduke Woodman, Jochen Martin Eppler:
Code Generation in Computational Neuroscience: A Review of Tools and Techniques. Frontiers Neuroinformatics 12: 68 (2018) - 2017
- [j33]Robert A. McDougal, Thomas M. Morse, Ted Carnevale, Luis N. Marenco, Rixin Wang, Michele Migliore, Perry L. Miller, Gordon M. Shepherd, Michael L. Hines:
Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience. J. Comput. Neurosci. 42(1): 1-10 (2017) - [j32]Zhongwei Lin, Carl Tropper, Yiping Yao, Robert A. McDougal, Mohammand Nazrul Ishlam Patoary, William W. Lytton, Michael L. Hines:
Load balancing for multi-threaded PDES of stochastic reaction-diffusion in neurons. J. Simulation 11(3): 267-284 (2017) - [j31]Zhongwei Lin, Carl Tropper, Robert A. McDougal, Mohammand Nazrul Ishlam Patoary, William W. Lytton, Yiping Yao, Michael L. Hines:
Multithreaded Stochastic PDES for Reactions and Diffusions in Neurons. ACM Trans. Model. Comput. Simul. 27(2): 7 (2017) - 2016
- [j30]Francesco Cavarretta, Addolorata Marasco, Michael L. Hines, Gordon M. Shepherd, Michele Migliore:
Glomerular and Mitral-Granule Cell Microcircuits Coordinate Temporal and Spatial Information Processing in the Olfactory Bulb. Frontiers Comput. Neurosci. 10: 67 (2016) - [j29]William W. Lytton, Alexandra Seidenstein, Salvador Dura-Bernal, Robert A. McDougal, Felix Schürmann, Michael L. Hines:
Simulation Neurotechnologies for Advancing Brain Research: Parallelizing Large Networks in NEURON. Neural Comput. 28(10): 2063-2090 (2016) - [c6]Pramod S. Kumbhar, Michael L. Hines, Aleksandr Ovcharenko, Damián A. Mallón, James Gonzalo King, Florentino Sainz, Felix Schürmann, Fabien Delalondre:
Leveraging a Cluster-Booster Architecture for Brain-Scale Simulations. ISC 2016: 363-380 - 2015
- [j28]Eilif B. Müller, James A. Bednar, Markus Diesmann, Marc-Oliver Gewaltig, Michael L. Hines, Andrew P. Davison:
Python in neuroscience. Frontiers Neuroinformatics 9: 11 (2015) - [j27]Samuel A. Neymotin, Robert A. McDougal, Mohamed A. Sherif, Christopher P. Fall, Michael L. Hines, William W. Lytton:
Neuronal Calcium Wave Propagation Varies with Changes in Endoplasmic Reticulum Parameters: A Computer Model. Neural Comput. 27(4): 898-924 (2015) - [j26]Robert A. McDougal, Thomas M. Morse, Michael L. Hines, Gordon M. Shepherd:
ModelView for ModelDB: Online Presentation of Model Structure. Neuroinformatics 13(4): 459-470 (2015) - [c5]Zhongwei Lin, Carl Tropper, Mohammand Nazrul Ishlam Patoary, Robert A. McDougal, William W. Lytton, Michael L. Hines:
NTW-MT: a Multi-threaded Simulator for Reaction Diffusion Simulations in NEURON. SIGSIM-PADS 2015: 157-167 - [c4]Aleksandr Ovcharenko, Pramod S. Kumbhar, Michael L. Hines, Francesco Cremonesi, Timothée Ewart, Stuart Yates, Felix Schürmann, Fabien Delalondre:
Simulating Morphologically Detailed Neuronal Networks at Extreme Scale. PARCO 2015: 787-796 - 2014
- [j25]Michele Migliore, Francesco Cavarretta, Michael L. Hines, Gordon M. Shepherd:
Distributed organization of a brain microcircuit analyzed by three-dimensional modeling: the olfactory bulb. Frontiers Comput. Neurosci. 8: 50 (2014) - [r4]Michael L. Hines, Ted Carnevale:
NEURON Simulation Environment. Encyclopedia of Computational Neuroscience 2014 - [r3]Michael L. Hines, Ted Carnevale:
Numerical Integration Methods. Encyclopedia of Computational Neuroscience 2014 - [r2]Robert A. McDougal, Rixin Wang, Thomas M. Morse, Michele Migliore, Luis N. Marenco, Ted Carnevale, Michael L. Hines, Gordon M. Shepherd:
ModelDB. Encyclopedia of Computational Neuroscience 2014 - [r1]Gordon M. Shepherd, Thomas M. Morse, Luis N. Marenco, Kei-Hoi Cheung, Ted Carnevale, Michele Migliore, Robert A. McDougal, Michael L. Hines, Perry L. Miller:
SenseLab: Integration of Multidisciplinary Neuroscience Data. Encyclopedia of Computational Neuroscience 2014 - 2013
- [j24]Robert A. McDougal, Michael L. Hines, William W. Lytton:
Reaction-diffusion in the NEURON simulator. Frontiers Neuroinformatics 7: 28 (2013) - [j23]Yuguo Yu, Thomas S. McTavish, Michael L. Hines, Gordon M. Shepherd, Cesare Valenti, Michele Migliore:
Sparse Distributed Representation of Odors in a Large-scale Olfactory Bulb Circuit. PLoS Comput. Biol. 9(3) (2013) - 2012
- [j22]Thomas S. McTavish, Michele Migliore, Gordon M. Shepherd, Michael L. Hines:
Mitral cell spike synchrony modulated by dendrodendritic synapse location. Frontiers Comput. Neurosci. 6: 3 (2012) - 2011
- [j21]Michael L. Hines, Sameer Kumar, Felix Schürmann:
Comparison of neuronal spike exchange methods on a Blue Gene/P supercomputer. Frontiers Comput. Neurosci. 5: 49 (2011) - 2010
- [j20]Padraig Gleeson, Sharon M. Crook, Robert C. Cannon, Michael L. Hines, Guy O. Billings, Matteo Farinella, Thomas M. Morse, Andrew P. Davison, Subhasis Ray, Upinder S. Bhalla, Simon R. Barnes, Yoana D. Dimitrova, Angus Silver:
NeuroML: A Language for Describing Data Driven Models of Neurons and Networks with a High Degree of Biological Detail. PLoS Comput. Biol. 6(6) (2010) - [c3]Sameer Kumar, Philip Heidelberger, Dong Chen, Michael L. Hines:
Optimization of applications with non-blocking neighborhood collectives via multisends on the Blue Gene/P supercomputer. IPDPS 2010: 1-11
2000 – 2009
- 2009
- [j19]Michael L. Hines, Andrew P. Davison, Eilif B. Müller:
NEURON and Python. Frontiers Neuroinformatics 3: 1 (2009) - [j18]James Gonzalo King, Michael L. Hines, Sean L. Hill, Philip H. Goodman, Henry Markram, Felix Schürmann:
A component-based extension framework for large-scale parallel simulations in NEURON. Frontiers Neuroinformatics 3: 10 (2009) - 2008
- [j17]Michael L. Hines, Hubert Eichner, Felix Schürmann:
Neuron splitting in compute-bound parallel network simulations enables runtime scaling with twice as many processors. J. Comput. Neurosci. 25(1): 203-210 (2008) - [j16]Michael L. Hines, Henry Markram, Felix Schürmann:
Fully implicit parallel simulation of single neurons. J. Comput. Neurosci. 25(3): 439-448 (2008) - [j15]William W. Lytton, Ahmet Omurtag, Samuel A. Neymotin, Michael L. Hines:
Just-in-Time Connectivity for Large Spiking Networks. Neural Comput. 20(11): 2745-2756 (2008) - 2007
- [j14]Romain Brette, Michelle Rudolph, Ted Carnevale, Michael L. Hines, David Beeman, James M. Bower, Markus Diesmann, Abigail Morrison, Philip H. Goodman, Frederick C. Harris Jr., Milind Zirpe, Thomas Natschläger, Dejan Pecevski, Bard Ermentrout, Mikael Djurfeldt, Anders Lansner, Olivier Rochel, Thierry Viéville, Eilif Mueller, Andrew P. Davison, Sami El Boustani, Alain Destexhe:
Simulation of networks of spiking neurons: A review of tools and strategies. J. Comput. Neurosci. 23(3): 349-398 (2007) - [j13]Robert C. Cannon, Marc-Oliver Gewaltig, Padraig Gleeson, Upinder S. Bhalla, Hugo Cornelis, Michael L. Hines, Fredrick W. Howell, Eilif Mueller, Joel R. Stiles, Stefan Wils, Erik De Schutter:
Interoperability of Neuroscience Modeling Software: Current Status and Future Directions. Neuroinformatics 5(2): 127-138 (2007) - 2006
- [j12]Michele Migliore, C. Cannia, William W. Lytton, Henry Markram, Michael L. Hines:
Parallel network simulations with NEURON. J. Comput. Neurosci. 21(2): 119-129 (2006) - 2005
- [j11]Michele Migliore, Michael L. Hines, Gordon M. Shepherd:
The Role of Distal Dendritic Gap Junctions in Synchronization of Mitral Cell Axonal Output. J. Comput. Neurosci. 18(2): 151-161 (2005) - [j10]William W. Lytton, Michael L. Hines:
Independent Variable Time-Step Integration of Individual Neurons for Network Simulations. Neural Comput. 17(4): 903-921 (2005) - 2004
- [j9]Michael L. Hines, Nicholas T. Carnevale:
Discrete event simulation in the NEURON environment. Neurocomputing 58-60: 1117-1122 (2004) - [j8]Michael L. Hines, Thomas M. Morse, Michele Migliore, Nicholas T. Carnevale, Gordon M. Shepherd:
ModelDB: A Database to Support Computational Neuroscience. J. Comput. Neurosci. 17(1): 7-11 (2004) - [j7]Andrew P. Davison, Thomas M. Morse, Michele Migliore, Gordon M. Shepherd, Michael L. Hines:
Semi-automated population of an online database of neuronal models (ModelDB) with citation information, using PubMed for validation. Neuroinformatics 2(3): 327-332 (2004) - 2003
- [j6]Michele Migliore, Thomas M. Morse, Andrew P. Davison, Luis N. Marenco, Gordon M. Shepherd, Michael L. Hines:
ModelDB - Making models publicly accessible to support computational neuroscience. Neuroinformatics 1(1): 135-139 (2003) - [j5]Daniel Gardner, Arthur W. Toga, Giorgio A. Ascoli, Jackson T. Beatty, James F. Brinkley, Anders M. Dale, Peter T. Fox, Esther P. Gardner, John S. George, Nigel H. Goddard, Kristen M. Harris, Edward Herskovits, Michael L. Hines, Gwen A. Jacobs, Russell E. Jacobs, Edward G. Jones, David N. Kennedy, Daniel Y. Kimberg, John C. Mazziotta, Perry L. Miller, Susumu Mori, David C. Mountain, Allan L. Reiss, Glenn D. Rosen, David A. Rottenberg, Gordon M. Shepherd, Neil R. Smalheiser, Kenneth P. Smith, Tom Strachan, David C. Van Essen, Robert W. Williams, Stephen T. C. Wong:
Towards effective and rewarding data sharing. Neuroinformatics 1(3): 289-295 (2003) - [c2]Chiquito J. Crasto, Thomas M. Morse, Michele Migliore, Prakash M. Nadkarni, Michael L. Hines, Douglas E. Brash, Perry L. Miller, Gordon M. Shepherd:
Creating Knowledgebases to Text-Mine PUBMED Articles Using Clustering Techniques. AMIA 2003 - 2001
- [j4]Nigel H. Goddard, Greg Hood, Fredrick W. Howell, Michael L. Hines, Erik De Schutter:
NEOSIM: Portable large-scale plug and play modelling. Neurocomputing 38-40: 1657-1661 (2001) - [j3]Perry L. Miller, Prakash M. Nadkarni, Michael S. Singer, Luis N. Marenco, Michael L. Hines, Gordon M. Shepherd:
Synthesis of Research: Integration of Multidisciplinary Sensory Data: A Pilot Model of the Human Brain Project Approach. J. Am. Medical Informatics Assoc. 8(1): 34-48 (2001) - 2000
- [j2]Michael L. Hines, Nicholas T. Carnevale:
Expanding NEURON's Repertoire of Mechanisms with NMODL. Neural Comput. 12(5): 995-1007 (2000)
1990 – 1999
- 1998
- [c1]Emmanouil Skoufos, Jason S. Mirsky, Matthew D. Healy, Michael S. Singer, Michael L. Hines, Prakash M. Nakardi, Perry L. Miller, Gordon M. Shepherd:
Acquiring, Storing and Retrieving Diverse Biomedical Data Using the World-Wide-Web: The SenseLab Paradigm. AMIA 1998 - 1997
- [j1]Michael L. Hines, Nicholas T. Carnevale:
The NEURON Simulation Environment. Neural Comput. 9(6): 1179-1209 (1997)
Coauthor Index
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