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ORCIDEugen Czeizler
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- affiliation: University of Turku, Finland
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2020 – today
- 2024
[c19]Abderrahim Oussama Batouche
, Eugen Czeizler, Miika Koskinen, Tuomas Mirtti, Antti Sakari Rannikko:
Synergizing Data Imputation and Electronic Health Records for Advancing Prostate Cancer Research: Challenges, and Practical Applications. BIOSTEC (2) 2024: 77-86- 2023
- [i4]Abderrahim Oussama Batouche, Eugen Czeizler, Miika Koskinen, Tuomas Mirtti, Antti Sakari Rannikko:
Synergizing Data Imputation and Electronic Health Records for Advancing Prostate Cancer Research: Challenges, and Practical Applications. CoRR abs/2311.02086 (2023) - 2022
- [j24]Nicoleta Siminea, Victor-Bogdan Popescu, José Ángel Sánchez Martín, Daniela Florea, Georgiana Gavril, Ana Maria Gheorghe, Corina Itcus, Krishna Kanhaiya, Octavian Pacioglu, Laura Ioana Popa, Romica Trandafir, Maria Iris Tusa, Manuela Sidoroff, Mihaela Paun, Eugen Czeizler, Andrei Paun, Ion Petre:
Network analytics for drug repurposing in COVID-19. Briefings Bioinform. 23(1) (2022) - [j23]Eugen Czeizler, Alexandru Popa, Victor Popescu:
Fixed Parameter Algorithms and Hardness of Approximation Results for the Structural Target Controllability Problem. Sci. Ann. Comput. Sci. 32(1): 109-136 (2022) - [c18]Frankie Spencer, Usman Sanwal, Eugen Czeizler:
Distributed Simulations of DNA Multi-strand Dynamics. SIMULTECH 2022: 234-243 - 2021
- [j22]Victor-Bogdan Popescu, José Ángel Sánchez Martín, Daniela Schacherer, Sadra Safadoust, Negin Majidi, Andrei Andronescu, Alexandru Nedea, Diana Ion, Eduard Mititelu, Eugen Czeizler, Ion Petre:
NetControl4BioMed: a web-based platform for controllability analysis of protein-protein interaction networks. Bioinform. 37(21): 3976-3978 (2021) - [c17]Frankie Spencer, Usman Sanwal, Eugen Czeizler:
VDNA-Lab: A Computational Simulation Platform for DNA Multi-strand Dynamics. SIMULTECH 2021: 288-294 - [i3]Elio Nushi, Victor-Bogdan Popescu, José Ángel Sánchez Martín, Sergiu Ivanov, Eugen Czeizler, Ion Petre:
Network modeling methods for precision medicine. CoRR abs/2104.09206 (2021) - 2020
- [i2]Victor-Bogdan Popescu, Krishna Kanhaiya, Iulian Nastac, Eugen Czeizler, Ion Petre:
Identifying efficient controls of complex interaction networks using genetic algorithms. CoRR abs/2007.04853 (2020)
2010 – 2019
- 2019
- [c16]Gefry Barad, Alexandru Amarioarei, Mihaela Paun, Ana-Maria Dobre, Corina Itcus, Iris Tusa, Romica Trandafir, Eugen Czeizler:
Simulation of one dimensional staged DNA tile assembly by the signal-passing hierarchical TAM. KES 2019: 1918-1927 - 2018
- [j21]Krishna Kanhaiya, Vladimir Rogojin, Keivan Kazemi, Eugen Czeizler, Ion Petre:
NetControl4BioMed: a pipeline for biomedical data acquisition and analysis of network controllability. BMC Bioinform. 19-S(7): 3-12 (2018) - [j20]Alexandru Amarioarei, Gefry Barad, Elena Czeizler, Eugen Czeizler, Ana-Maria Dobre, Corina Itcus, Andrei Paun, Mihaela Paun, Romica Trandafir, Iris Tusa:
One Dimensional DNA Tiles Self Assembly Model Simulation. Int. J. Unconv. Comput. 13(4-5): 399-415 (2018) - [j19]Eugen Czeizler, Wu Kai Chiu, Cristian Gratie, Krishna Kanhaiya, Ion Petre:
Structural Target Controllability of Linear Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 15(4): 1217-1228 (2018) - [c15]Eugen Czeizler, Alexandru Popa, Victor Popescu:
Fixed Parameter Algorithms and Hardness of Approximation Results for the Structural Target Controllability Problem. AlCoB 2018: 103-114 - [c14]Alexandru Amarioarei, Gefry Barad, Eugen Czeizler, Ana-Maria Dobre, Corina Itcus, Victor Mitrana, Andrei Paun, Mihaela Paun, Frankie Spencer, Romica Trandafir, Iris Tusa:
DNA-Guided Assembly of Nanocellulose Meshes. TPNC 2018: 253-265 - 2017
- [j18]Abdulmelik Mohammed, Elena Czeizler, Eugen Czeizler:
Computational modelling of the kinetic Tile Assembly Model using a rule-based approach. Theor. Comput. Sci. 701: 203-215 (2017) - 2016
- [c13]Eugen Czeizler, Cristian Gratie, Wu Kai Chiu, Krishna Kanhaiya, Ion Petre:
Target Controllability of Linear Networks. CMSB 2016: 67-81 - 2015
- [j17]Erik Benson, Abdulmelik Mohammed, Johan Gardell, Sergej Masich, Eugen Czeizler, Pekka Orponen, Björn Högberg:
DNA rendering of polyhedral meshes at the nanoscale. Nat. 523(7561): 441-444 (2015) - [c12]Sepinoud Azimi, Eugen Czeizler, Cristian Gratie, Diana-Elena Gratie, Bogdan Iancu, Nebiat Ibssa, Ion Petre, Vladimir Rogojin, Tolou Shadbahr, Fatemeh Shokri:
An Excursion Through Quantitative Model Refinement. Int. Conf. on Membrane Computing 2015: 25-47 - 2014
- [j16]Mika Göös, Tuomo Lempiäinen, Eugen Czeizler, Pekka Orponen:
Search methods for tile sets in patterned DNA self-assembly. J. Comput. Syst. Sci. 80(1): 297-319 (2014) - [c11]Vinay Kumar Gautam, Eugen Czeizler, Pauline C. Haddow, Martin Kuiper:
Design of a Minimal System for Self-replication of Rectangular Patterns of DNA Tiles. TPNC 2014: 119-133 - [i1]Mika Göös, Tuomo Lempiäinen, Eugen Czeizler, Pekka Orponen:
Search Methods for Tile Sets in Patterned DNA Self-Assembly. CoRR abs/1412.7219 (2014) - 2013
- [j15]Eugen Czeizler, Alexandru Popa:
Synthesizing minimal tile sets for complex patterns in the framework of patterned DNA self-assembly. Theor. Comput. Sci. 499: 23-37 (2013) - [c10]Eugen Czeizler, Pekka Orponen:
Yield Optimization Strategies for (DNA) Staged Tile Assembly Systems. TPNC 2013: 31-44 - 2012
- [j14]Bogdan Iancu, Elena Czeizler, Eugen Czeizler, Ion Petre:
Quantitative Refinement of Reaction Models. Int. J. Unconv. Comput. 8(5-6): 529-550 (2012) - [j13]Eugen Czeizler, Andrzej Mizera, Elena Czeizler, Ralph-Johan Back, John E. Eriksson, Ion Petre:
Quantitative Analysis of the Self-Assembly Strategies of Intermediate Filaments from Tetrameric Vimentin. IEEE ACM Trans. Comput. Biol. Bioinform. 9(3): 885-898 (2012) - [j12]Eugen Czeizler, Vladimir Rogojin, Ion Petre:
The Phosphorylation of the Heat Shock Factor as a Modulator for the Heat Shock Response. IEEE ACM Trans. Comput. Biol. Bioinform. 9(5): 1326-1337 (2012) - [j11]Andrzej Mizera, Eugen Czeizler, Ion Petre:
Self-assembly Models of Variable Resolution. Trans. Comp. Sys. Biology 14: 181-203 (2012) - [c9]Eugen Czeizler, Alexandru Popa:
Synthesizing Minimal Tile Sets for Complex Patterns in the Framework of Patterned DNA Self-Assembly. DNA 2012: 58-72 - 2011
- [j10]Elena Czeizler, Eugen Czeizler, Lila Kari, Shinnosuke Seki:
An extension of the Lyndon-Schützenberger result to pseudoperiodic words. Inf. Comput. 209(4): 717-730 (2011) - [j9]Eugen Czeizler, Lila Kari:
Towards a neighborhood simplification of tile systems: From Moore to quasi-linear dependencies. Nat. Comput. 10(1): 103-117 (2011) - [c8]Eugen Czeizler, Vladimir Rogojin, Ion Petre:
The phosphorylation of the heat shock factor as a modulator for the heat shock response. CMSB 2011: 9-23 - [c7]Tuomo Lempiäinen, Eugen Czeizler, Pekka Orponen:
Synthesizing Small and Reliable Tile Sets for Patterned DNA Self-assembly. DNA 2011: 145-159 - [c6]Elena Czeizler, Eugen Czeizler, Bogdan Iancu, Ion Petre:
Quantitative Model Refinement as a Solution to the Combinatorial Size Explosion of Biomodels. SASB 2011: 35-53
2000 – 2009
- 2009
- [j8]Eugen Czeizler, Lila Kari:
Geometrical tile design for complex neighborhoods. Frontiers Comput. Neurosci. 3: 20 (2009) - [j7]Elena Czeizler, Eugen Czeizler, Lila Kari, Kai Salomaa:
On the descriptional complexity of Watson-Crick automata. Theor. Comput. Sci. 410(35): 3250-3260 (2009) - [c5]Elena Czeizler, Eugen Czeizler, Ralph-Johan Back, Ion Petre:
Control Strategies for the Regulation of the Eukaryotic Heat Shock Response. CMSB 2009: 111-125 - [c4]Elena Czeizler, Eugen Czeizler, Lila Kari, Shinnosuke Seki:
An Extension of the Lyndon Schützenberger Result to Pseudoperiodic Words. Developments in Language Theory 2009: 183-194 - 2008
- [j6]Marie-Pierre Béal, Eugen Czeizler, Jarkko Kari, Dominique Perrin:
Unambiguous Automata. Math. Comput. Sci. 1(4): 625-638 (2008) - [c3]Elena Czeizler, Eugen Czeizler, Lila Kari, Kai Salomaa:
Watson-Crick automata: determinism and state complexity. DCFS 2008: 121-133 - 2007
- [j5]Eugen Czeizler, Jarkko Kari:
A tight linear bound on the synchronization delay of bijective automata. Theor. Comput. Sci. 380(1-2): 23-36 (2007) - 2006
- [j4]Elena Czeizler, Eugen Czeizler:
Parallel Communicating Watson-Crick Automata Systems. Acta Cybern. 17(4): 685-700 (2006) - [j3]Elena Czeizler, Eugen Czeizler:
A Short Survey on Watson-Crick Automata. Bull. EATCS 88: 104-119 (2006) - [j2]Elena Czeizler, Eugen Czeizler:
On the power of parallel communicating Watson-Crick automata systems. Theor. Comput. Sci. 358(1): 142-147 (2006) - 2005
- [c2]Eugen Czeizler, Jarkko Kari:
A Tight Linear Bound on the Neighborhood of Inverse Cellular Automata. ICALP 2005: 410-420 - 2004
- [j1]Eugen Czeizler:
On the size of the inverse neighborhoods for one-dimensional reversible cellular automata. Theor. Comput. Sci. 325(2): 273-284 (2004) - 2002
- [c1]Eugen Czeizler:
Self-activating P Systems. WMC-CdeA 2002: 234-246
Coauthor Index
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