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ORCID3rd ICCABS 2013: New Orleans, LA, USA
- IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2013, New Orleans, LA, USA, June 12-14, 2013. IEEE Computer Society 2013
- Fabio Vandin, Eli Upfal, Benjamin J. Raphael:
Identifying significant mutations in large cohorts of cancer genomes. 1 - James Lindsay, Craig E. Nelson, Ion I. Mandoiu:
Towards whole transcriptome deconvolution using single-cell data. 1 - Gabriel Ilie, Alex Zelikovsky
, Ion I. Mandoiu:
Reference assisted nucleic acid sequence reconstruction from mass spectrometry data. 1 - Pavel Skums, Olga Glebova, Alex Zelikovsky, Ion I. Mandoiu, Yuri Khudyakov:
Optimizing pooling strategies for the massive next-generation sequencing of viral samples. 1 - Kevin Molloy, M. Jennifer Van, Daniel Barbará, Amarda Shehu:
Higher-order representations of protein structure space. 1-2 - James Lara, Yuri Khudyakov, F. Xavier López-Labrador, Fernando González-Candelas, Marina Berenguer:
Hepatitis C virus genetic association to rate of liver fibrosis progression. 1 - Emily Flynn, Filip Jagodzinski, Sharon Pamela Santana, Ileana Streinu:
Rigidity and flexibility of protein-nucleic acid complexes. 1-6 - Ei-Wen Yang, Thomas Girke, Tao Jiang:
Differential gene expression analysis using coexpression and RNA-Seq data. 1 - Karen Merchante, Qiwen Hu, Anna N. Stepanova, José M. Alonso, Steffen Heber:
Deep sequencing of ribosomal footprints for studying genome-wide mRNA translation in plants. 1 - Elena G. Randou, Daniel Veltri, Amarda Shehu:
Systematic analysis of global features and model building for recognition of antimicrobial peptides. 1-6 - Raed I. Seetan, Anne M. Denton, Omar Al Azzam, Ajay Kumar, Muhammad Javed Iqbal, Shahryar F. Kianian:
Poster: Clustering-based approach for constructing reliable radiation hybrid framework maps. 1 - Layla Oesper, Benjamin J. Raphael:
Workshop: Reconstructing the organization of cancer genomes. 1 - Fabiola M. R. Pinheiro, Mu-Hsing Kuo, Alex Thomo, Jeff Barnett:
Extracting association rules from liver cancer data using the FP-growth algorithm. 1 - Serghei Mangul, Sahar Al Seesi, Ion I. Mandoiu, Adrian Caciula, Alex Zelikovsky, Dumitru Brinza:
Transcriptome assembly and quantification from Ion Torrent RNA-Seq data. 1 - Claudia Vilo, Daniel Kunz, Xiang Gao, Qunfeng Dong:
POSTER: "Pseudomonas fluorescens Strain NCIMB 11764, a unique bacterium with cyanide adaptation features". 1 - Karthik Tangirala, Doina Caragea:
Extraction of gene regulatory networks from biological literature. 1-6 - Xiaxia Yu, Robert W. Harrison, Irene T. Weber:
HIV drug resistance prediction using multiple regression. 1-2 - Rafael Toledo F. de Souza, José Luiz Rybarczyk Filho, Ney Lemke, Suzana V. Schönwald, Emerson L. de Santa-Helena, Günther J. L. Gerhardt:
Poster: Quantification of correlations between sleep spindles in EEG for patients with sleep apnea. 1 - Meznah Almutairy, Jordan A. Fish, C. Titus Brown:
Space-efficient read indexing and retrieval based on compressed de Bruijn graphs. 1 - Guoxing Fu, Amit Sabnis, Robert W. Harrison:
A deterministic-stochastic crossover algorithm for simulation of complex biochemical systems. 1-7 - Rob Gysel, Dan Gusfield, Kristian Stevens:
Triangulation heuristics for maximum character compatibility. 1-2 - Jason M. Kinser, Stephen J. Lockett, Thomas Turbyville, Karlyne M. Reilly, John Beutler:
Comparing analysis engines for generated micro-patterned, actin images. 1-5 - Mohammad Shamsur Rahman, Alioune Ngom:
FAC-PIN: Fast agglomerative clustering method for functional modules and protein complex identification in PINs. 1-6 - Inna Rytsareva, Ananth Kalyanaraman, Kishori M. Konwar, Steven J. Hallam:
Scalable heuristics for clustering biological graphs. 1-6 - David S. Campo, Zoya Dimitrova, Pavel Skums, Yuri Khudyakov:
Mutational robustness of hepatitis C virus intra-host variants. 1 - George Mathew, Zoran Obradovic:
Poster: Auto-reduction of features for containing communication costs in a distributed privacy-preserving clinical decision support system. 1 - Chong Chu, Jin Zhang, Yufeng Wu:
An SVM-based approach for genotyping deletions and insertions with population sequence reads. 1 - Ananth Kalyanaraman, Jaroslaw Zola:
BigLS - The 1st International Workshop on Big Data in Life Sciences. 1 - Robert W. Harrison, Xiaxia Yu, Irene T. Weber:
Using triangulation to include target structure improves drug resistance prediction accuracy. 1 - Srinivas Aluru:
Large-scale metagenomic clustering via quasi clique enumeration and read assignment ambiguity resolution. 1 - Shibdas Bandyopadhyay, Sartaj Sahni, Sanguthevar Rajasekaran:
PMS6MC: A multicore algorithm for motif discovery. 1-5 - Adrian Caciula, Alex Zelikovsky, Serghei Mangul, James Lindsay, Ion I. Mandoiu:
Monte-Carlo Regression algorithm for isoform frequency estimation from RNA-Seq data. 1 - Alexander Artyomenko, Nicholas Mancuso, Alex Zelikovsky, Pavel Skums, Ion I. Mandoiu:
kGEM: An EM-based algorithm for local reconstruction of viral quasispecies. 1 - Ionel Rata, Kyle Wessells, Yaohang Li:
An improved statistics-based backbone torsion potential energy for protein loop structure modeling. 1-6 - Irena Lanc, Scott J. Emrich:
An unsupervised learning approach to assembly validation. 1-2 - Ben Langmead:
Practical software for big genomics data. 1 - Wei Zhang, Erliang Zeng, Scott J. Emrich, Joshua Livermore, Dan Liu, Stuart E. Jones:
Predicting bacterial functional traits from whole genome sequences using random forest. 1-2 - Nam S. Vo, Quang Tran, Nobal B. Niraula, Vinhthuy Phan:
A randomized algorithm for aligning DNA sequences to reference genomes. 1-6 - Rittika Shamsuddin, Milka Doktorova, Sheila Jaswal, Audrey Lee-St. John, Kathryn McMenimen:
Computational prediction of hinge axes in proteins. 1-2 - Kamesh Madduri:
Parallel analysis of large graph-structured data in genomics and proteomics. 1 - Pavel Skums, David S. Campo, Zoya Dimitrova, Leonid Bunimovich, Yuri Khudyakov:
Computational analysis and modelling of intra-host adaptation of hepatitis C virus: The role of immune cross-reactivity of HCV quasispecies. 1 - Armin Töpfer, Francesca Di Giallonardo, Karin J. Metzner, Huldrych F. Günthard, Niko Beerenwinkel:
Probing of viral diversity by global haplotype prediction. 1 - Sing-Hoi Sze, Aaron M. Tarone:
A memory-efficient algorithm to obtain splicing graphs and de novo expression estimates from de Bruijn graphs of RNA-seq data. 1 - Nicholas Mancuso, Alexander Artyomenko, Alex Zelikovsky, Pavel Skums, Ion I. Mandoiu:
Estimation of viral population structure from amplicon-based reads. 1 - Sanghoon Lee, Saeid Belkasim:
Poster: User-centered query expansion model for health disparities research. 1 - Ilkay Altintas:
Workflow-driven programming paradigms for distributed analysis of biological big data. 1 - Farhad Hormozdiari, Eleazar Eskin:
Memory efficient assembly of human genome. 1 - Sanguthevar Rajasekaran, Subrata Saha:
Efficient algorithms for sequence assembly. 1 - Junjie Li, Sanjay Ranka, Sartaj Sahni:
Multicore and GPU algorithms for nussinov RNA folding. 1-2 - Ashraf Yaseen, Yaohang Li:
Template-based prediction of protein 8-state secondary structures. 1-2
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