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Neuroinformatics, Volume 18
Volume 18, Number 1, January 2020
- Yang Li
, Jingyu Liu
, Zi-Wen Peng, Can Sheng, Minjeong Kim
, Pew-Thian Yap, Chong-Yaw Wee, Dinggang Shen:
Fusion of ULS Group Constrained High- and Low-Order Sparse Functional Connectivity Networks for MCI Classification. 1-24 - Andac Hamamci
:
Cellular Automata Tractography: Fast Geodesic Diffusion MR Tractography and Connectivity Based Segmentation on the GPU. 25-41 - Mingliang Wang
, Xiaoke Hao, Jiashuang Huang, Kangcheng Wang
, Li Shen, Xijia Xu, Daoqiang Zhang, Mingxia Liu:
Hierarchical Structured Sparse Learning for Schizophrenia Identification. 43-57 - Shaina Sta. Cruz, Ivo D. Dinov
, Megan M. Herting, Clio González-Zacarías
, Hosung Kim, Arthur W. Toga, Farshid Sepehrband
:
Imputation Strategy for Reliable Regional MRI Morphological Measurements. 59-70 - Thanh Duc Nguyen, Seungjun Ryu, Muhammad Naveed Iqbal Qureshi, Min Choi, Kun Ho Lee, Boreom Lee
:
3D-Deep Learning Based Automatic Diagnosis of Alzheimer's Disease with Joint MMSE Prediction Using Resting-State fMRI. 71-86 - Mohammed A. Syed
, Zhi Yang
, D. Rangaprakash, Xiaoping Hu
, Michael N. Dretsch, Jeffrey S. Katz, Thomas S. Denney, Gopikrishna Deshpande
:
DisConICA: a Software Package for Assessing Reproducibility of Brain Networks and their Discriminability across Disorders. 87-107 - Thomas G. Close
, Phillip G. D. Ward, Francesco Sforazzini, Wojtek Goscinski, Zhaolin Chen
, Gary F. Egan:
A Comprehensive Framework to Capture the Arcana of Neuroimaging Analysis. 109-129 - Florian Ganglberger
, Joanna Kaczanowska
, Wulf Haubensak
, Katja Bühler
:
A Data Structure for Real-Time Aggregation Queries of Big Brain Networks. 131-149 - Michaela Spiteri
, Jean-Yves Guillemaut
, David Windridge
, Shivaram Avula, Ram Kumar, Emma Lewis:
Fully-Automated Identification of Imaging Biomarkers for Post-Operative Cerebellar Mutism Syndrome Using Longitudinal Paediatric MRI. 151-162 - Raha M. Dastgheyb
, Seung-Wan Yoo, Norman J. Haughey:
MEAnalyzer - a Spike Train Analysis Tool for Multi Electrode Arrays. 163-179
Volume 18, Number 2, April 2020
- Xiaofeng Xu, Yue Guan
, Hui Gong, Zhao Feng, Wenjuan Shi, Anan Li, Miao Ren, Jing Yuan
, Qingming Luo
:
Automated Brain Region Segmentation for Single Cell Resolution Histological Images Based on Markov Random Field. 181-197 - Shiwei Li, Tingwei Quan
, Hang Zhou
, Qing Huang, Tao Guan, Yijun Chen, Cheng Xu, Hongtao Kang, Anan Li, Ling Fu
, Qingming Luo
, Hui Gong, Shaoqun Zeng
:
Brain-Wide Shape Reconstruction of a Traced Neuron Using the Convex Image Segmentation Method. 199-218 - Juan Eloy Arco
, Paloma Díaz-Gutiérrez
, Javier Ramírez
, María Ruz
:
Atlas-Based Classification Algorithms for Identification of Informative Brain Regions in fMRI Data. 219-236 - Qin He, Atena Rezaei
, Sampsa Pursiainen:
Zeffiro User Interface for Electromagnetic Brain Imaging: a GPU Accelerated FEM Tool for Forward and Inverse Computations in Matlab. 237-250 - Jiong Wu
, Xiaoying Tang:
A Large Deformation Diffeomorphic Framework for Fast Brain Image Registration via Parallel Computing and Optimization. 251-266 - Chi-Tin Shih
, Yen-Jen Lin, Cheng-Te Wang, Ting-Yuan Wang, Chih-Chen Chen, Ta-Shun Su, Chung-Chuan Lo
, Ann-Shyn Chiang:
Diverse Community Structures in the Neuronal-Level Connectome of the Drosophila Brain. 267-281 - Mark L. C. M. Bruurmijn
, Wouter Schellekens
, Mathijs Raemaekers, Nick F. Ramsey
:
A Novel 2D Standard Cartesian Representation for the Human Sensorimotor Cortex. 283-293 - Jiajia Zhao, Chao Tang, Jingxin Nie
:
Functional Parcellation of Individual Cerebral Cortex Based on Functional MRI. 295-306 - Robert Ciszek, Pedro Andrade
, Jesse Tapiala
, Asla Pitkänen, Xavier Ekolle Ndode-Ekane
:
Web Application for Quantification of Traumatic Brain Injury-Induced Cortical Lesions in Adult Mice. 307-317 - Hancan Zhu
, Ehsan Adeli
, Feng Shi
, Dinggang Shen:
FCN Based Label Correction for Multi-Atlas Guided Organ Segmentation. 319-331 - Baris Kanber
, James K. Ruffle
, M. Jorge Cardoso
, Sébastien Ourselin
, Olga Ciccarelli
:
Neurosense: deep sensing of full or near-full coverage head/brain scans in human magnetic resonance imaging. 333-336
Volume 18, Number 3, June 2020
- Giorgio A. Ascoli
:
Neuroinformatics in the Time of Coronavirus. 337-338 - Gustavo S. P. Pamplona
, Bruno Hebling Vieira
, Frank Scharnowski
, Carlos Ernesto Garrido Salmon:
Personode: A Toolbox for ICA Map Classification and Individualized ROI Definition. 339-349 - Jeremy A. Taylor
, Marta I. Garrido:
Porthole and Stormcloud: Tools for Visualisation of Spatiotemporal M/EEG Statistics. 351-363 - Nathaniel D. Sisterson
, Thomas A. Wozny
, Vasileios Kokkinos
, Anto Bagic, Alexandra P. Urban, Robert Mark Richardson:
A Rational Approach to Understanding and Evaluating Responsive Neurostimulation. 365-375 - Manuel Reyes-Sanchez
, Rodrigo Amaducci
, Irene Elices
, Francisco de Borja Rodríguez Ortiz
, Pablo Varona
:
Automatic Adaptation of Model Neurons and Connections to Build Hybrid Circuits with Living Networks. 377-393 - Yikang Liu
, Hayreddin Said Unsal
, Yi Tao, Nanyin Zhang
:
Automatic Brain Extraction for Rodent MRI Images. 395-406 - Francesco Cremonesi
, Felix Schürmann
:
Understanding Computational Costs of Cellular-Level Brain Tissue Simulations Through Analytical Performance Models. 407-428 - Cassidy M. Fiford
, Carole H. Sudre
, Hugh Pemberton
, Phoebe Walsh, Emily N. Manning
, Ian B. Malone
, Jennifer Nicholas, Willem H. Bouvy, Owen T. Carmichael
, Geert Jan Biessels, M. Jorge Cardoso
, Josephine Barnes:
Automated White Matter Hyperintensity Segmentation Using Bayesian Model Selection: Assessment and Correlations with Cognitive Change. 429-449 - Taylor Bolt, Jason S. Nomi, Rachel Arens, Shruti Gopal Vij, Michael C. Riedel, Taylor Salo, Angela R. Laird, Simon B. Eickhoff, Lucina Q. Uddin
:
Ontological Dimensions of Cognitive-Neural Mappings. 451-463 - Reza Foodeh, Saeed Ebadollahi, Mohammad Reza Daliri:
Regularized Partial Least Square Regression for Continuous Decoding in Brain-Computer Interfaces. 465-477 - Tamal Batabyal
, Barry G. Condron, Scott T. Acton:
NeuroPath2Path: Classification and elastic morphing between neuronal arbors using path-wise similarity. 479-508
Volume 18, Number 4, October 2020
- Frederic Briend
, E. Leroux, C. Nathou, Nicolas Delcroix, Sonia Dollfus
, Octave Etard:
GeodesicSlicer: a Slicer Toolbox for Targeting Brain Stimulation. 509-516 - Adrià Casamitjana
, Verónica Vilaplana
, Santi Puch, Asier Aduriz, Carlos López, Grégory Operto, Raffaele Cacciaglia
, Carles Falcón
, José Luis Molinuevo, Juan Domingo Gispert
:
NeAT: a Nonlinear Analysis Toolbox for Neuroimaging. 517-530 - Yanshuai Tu, Liang Mi, Wen Zhang
, Haomeng Zhang, Junwei Zhang, Yonghui Fan, Dhruman Goradia, Kewei Chen, Richard J. Caselli, Eric M. Reiman, Xianfeng Gu, Yalin Wang
:
Computing Univariate Neurodegenerative Biomarkers with Volumetric Optimal Transportation: A Pilot Study. 531-548 - Wieslaw L. Nowinski
:
Human Brain Atlases in Stroke Management. 549-567 - Meron Vermaas
, Maria Carla Piastra
, Thom F. Oostendorp
, Nick F. Ramsey, Paul H. E. Tiesinga:
FEMfuns: A Volume Conduction Modeling Pipeline that Includes Resistive, Capacitive or Dispersive Tissue and Electrodes. 569-580 - Netanel Ofer, Orit Shefi, Gur Yaari:
Axonal Tree Morphology and Signal Propagation Dynamics Improve Interneuron Classification. 581-590 - Sophie Laturnus
, Dmitry Kobak, Philipp Berens:
A Systematic Evaluation of Interneuron Morphology Representations for Cell Type Discrimination. 591-609 - Nestor Timonidis
, Rembrandt Bakker
, Paul H. E. Tiesinga:
Prediction of a Cell-Class-Specific Mouse Mesoconnectome Using Gene Expression Data. 611-626 - Corentin Mercier, Sylvain Rousseau
, Pietro Gori, Isabelle Bloch, Tamy Boubekeur:
QFib: Fast and Efficient Brain Tractogram Compression. 627-640 - Carlos Sevilla-Salcedo
, Vanessa Gómez-Verdejo
, Jussi Tohka:
Regularized Bagged Canonical Component Analysis for Multiclass Learning in Brain Imaging. 641-659 - Adam Gorlewicz
, Katarzyna Krawczyk
, Andrzej A. Szczepankiewicz
, Pawel Trzaskoma
, Christophe Mulle
, Grzegorz M. Wilczynski
:
Colocalization Colormap -an ImageJ Plugin for the Quantification and Visualization of Colocalized Signals. 661-664

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