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2020 – today
- 2024
[c4]Sebastian Pohl
, Nourhan Elfaramawy, Artur Miling, Kedi Cao, Birte Kehr, Matthias Weidlich:
How Do Users Design Scientific Workflows? The Case of Snakemake and Nextflow. SSDBM 2024: 10:1-10:12- 2023
- [c3]Kedi Cao, Nourhan Elfaramawy, Matthias Weidlich, Birte Kehr:
From Program Chains to Exploratory Workflows: PopinSnake for Genomic Insertion Detection. e-Science 2023: 1-7 - [i1]Sebastian Pohl, Nourhan Elfaramawy, Kedi Cao, Birte Kehr, Matthias Weidlich:
How do users design scientific workflows? The Case of Snakemake. CoRR abs/2309.14097 (2023) - 2022
- [j10]Thomas Krannich, W. Timothy J. White, Sebastian Niehus, Guillaume Holley, Bjarni V. Halldórsson, Birte Kehr:
Population-scale detection of non-reference sequence variants using colored de Bruijn graphs. Bioinform. 38(3): 604-611 (2022) - 2021
- [j9]Julia Markowski, Rieke Kempfer, Alexander Kukalev, Ibai Irastorza-Azcarate, Gesa Loof, Birte Kehr, Ana Pombo, Sven Rahmann, Roland F. Schwarz:
GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data. Bioinform. 37(19): 3128-3135 (2021) - [j8]Ulf Leser, Marcus Hilbrich, Claudia Draxl, Peter Eisert, Lars Grunske, Patrick Hostert, Dagmar Kainmüller, Odej Kao, Birte Kehr, Timo Kehrer, Christoph Koch, Volker Markl, Henning Meyerhenke, Tilmann Rabl, Alexander Reinefeld, Knut Reinert, Kerstin Ritter, Björn Scheuermann, Florian Schintke, Nicole Schweikardt, Matthias Weidlich:
The Collaborative Research Center FONDA. Datenbank-Spektrum 21(3): 255-260 (2021)
2010 – 2019
- 2017
- [j7]Snædís Kristmundsdóttir, Brynja D. Sigurpálsdóttir, Birte Kehr, Bjarni V. Halldórsson:
popSTR: population-scale detection of STR variants. Bioinform. 33(24): 4041-4048 (2017) - 2016
- [j6]Birte Kehr, Páll Melsted, Bjarni V. Halldórsson:
PopIns: population-scale detection of novel sequence insertions. Bioinform. 32(7): 961-967 (2016) - [j5]Birte Kehr, Páll Melsted:
chopBAI: BAM index reduction solves I/O bottlenecks in the joint analysis of large sequencing cohorts. Bioinform. 32(14): 2202-2204 (2016) - 2014
- [b1]Birte Kehr:
Contributions to computing and modeling multiple whole-genome alignments. Free University of Berlin, 2014 - [j4]Jialu Hu, Birte Kehr, Knut Reinert:
NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networks. Bioinform. 30(4): 540-548 (2014) - [j3]Birte Kehr, Kathrin Trappe, Manuel Holtgrewe, Knut Reinert:
Genome alignment with graph data structures: a comparison. BMC Bioinform. 15: 99 (2014) - 2012
- [c2]Birte Kehr, Knut Reinert, Aaron E. Darling:
Hidden Breakpoints in Genome Alignments. WABI 2012: 391-403 - 2011
- [j2]Birte Kehr, David Weese, Knut Reinert:
STELLAR: fast and exact local alignments. BMC Bioinform. 12(S-9): S15 (2011) - [j1]Sebastian Böcker, Birte Kehr, Florian Rasche:
Determination of Glycan Structure from Tandem Mass Spectra. IEEE ACM Trans. Comput. Biol. Bioinform. 8(4): 976-986 (2011)
2000 – 2009
- 2009
- [c1]Sebastian Böcker, Birte Kehr, Florian Rasche:
Determination of Glycan Structure from Tandem Mass Spectra. COCOON 2009: 258-267
Coauthor Index
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