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ORCIDOndrej Strnad
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2020 – today
- 2024
[j9]Julio Rey Ramirez
, Peter Rautek, Ciril Bohak, Ondrej Strnad, Zheyuan Zhang, Sai Li, Ivan Viola, Wolfgang Heidrich:
GPU Accelerated 3D Tomographic Reconstruction and Visualization From Noisy Electron Microscopy Tilt-Series. IEEE Trans. Vis. Comput. Graph. 30(7): 3331-3345 (2024)- [j8]Ziga Lesar, Ruwayda Alharbi, Ciril Bohak, Ondrej Strnad, Christoph Heinzl, Matija Marolt, Ivan Viola:
Volume conductor: interactive visibility management for crowded volumes. Vis. Comput. 40(2): 1005-1020 (2024) - [c4]Ngan V. T. Nguyen, Feng Liang, Dominik Engel, Ciril Bohak, Ondrej Strnad, Timo Ropinski, Ivan Viola:
Towards Differentiable Electron Microscopy Simulation: Methods and Applications. PacificVis 2024: 62-71 - [i6]Ruwayda Alharbi, Ondrej Strnad, Markus Hadwiger, Ivan Viola:
Nanouniverse: Virtual Instancing of Structural Detail and Adaptive Shell Mapping. CoRR abs/2404.05116 (2024) - 2023
- [j7]David Kouril, Ondrej Strnad, Peter Mindek, Sarkis Halladjian, Tobias Isenberg, M. Eduard Gröller, Ivan Viola:
Molecumentary: Adaptable Narrated Documentaries Using Molecular Visualization. IEEE Trans. Vis. Comput. Graph. 29(3): 1733-1747 (2023) - [j6]Ruwayda Alharbi, Ondrej Strnad, Laura Rosalia Luidolt, Manuela Waldner, David Kouril, Ciril Bohak, Tobias Klein, Eduard Gröller, Ivan Viola:
Nanotilus: Generator of Immersive Guided-Tours in Crowded 3D Environments. IEEE Trans. Vis. Comput. Graph. 29(3): 1860-1875 (2023) - [j5]Ngan V. T. Nguyen, Ciril Bohak, Dominik Engel, Peter Mindek, Ondrej Strnad, Peter Wonka, Sai Li, Timo Ropinski, Ivan Viola:
Finding Nano-Ötzi: Cryo-Electron Tomography Visualization Guided by Learned Segmentation. IEEE Trans. Vis. Comput. Graph. 29(10): 4198-4214 (2023) - [i5]Donggang Jia, Alexandra Irger, Ondrej Strnad, Johanna Björklund, Anders Ynnerman, Ivan Viola:
VOICE: Visual Oracle for Interaction, Conversation, and Explanation. CoRR abs/2304.04083 (2023) - 2022
- [i4]Ruwayda Alharbi, Ondrej Strnad, Tobias Klein, Ivan Viola:
Nanomatrix: Scalable Construction of Crowded Biological Environments. CoRR abs/2204.05762 (2022) - [i3]Deng Luo, Alexandre Kouyoumdjian, Ondrej Strnad, Haichao Miao, Ivan Barisic, Ivan Viola:
SynopSet: Multiscale Visual Abstraction Set for Explanatory Analysis of DNA Nanotechnology Simulations. CoRR abs/2205.01628 (2022) - [i2]Ziga Lesar, Ruwayda Alharbi, Ciril Bohak, Ondrej Strnad, Christoph Heinzl, Matija Marolt, Ivan Viola:
Volume Conductor: Interactive Visibility Management for Crowded Volumes. CoRR abs/2206.07392 (2022) - 2021
- [j4]Ngan V. T. Nguyen, Ondrej Strnad, Tobias Klein, Deng Luo, Ruwayda Alharbi, Peter Wonka, Martina Maritan, Peter Mindek, Ludovic Autin, David S. Goodsell, Ivan Viola:
Modeling in the Time of COVID-19: Statistical and Rule-based Mesoscale Models. IEEE Trans. Vis. Comput. Graph. 27(2): 722-732 (2021) - [c3]Peter Mindek, Ivan Viola, Ondrej Strnad, Ciril Bohak, Sai Li, Tobias Klein:
@What does a virus actually look like? SIGGRAPH Computer Animation Festival 2021: 30:1 - 2020
- [i1]David Kouril, Ondrej Strnad, Peter Mindek, Sarkis Halladjian, Tobias Isenberg, M. Eduard Gröller, Ivan Viola:
Molecumentary: Scalable Narrated Documentaries Using Molecular Visualization. CoRR abs/2011.02418 (2020)
2010 – 2019
- 2018
- [j3]Adam Jurcík, David Bednar, Jan Byska, Sérgio M. Marques, Katarína Furmanová, Lukas Daniel, Piia Kokkonen, Jan Brezovsky, Ondrej Strnad, Jan Stourac, Antonín Pavelka, Martin Manak, Jirí Damborský, Barbora Kozlíková:
CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories. Bioinform. 34(20): 3586-3588 (2018) - 2014
- [j2]Barbora Kozlíková, Eva Sebestova, Vilém Sustr, Jan Brezovsky, Ondrej Strnad, Lukas Daniel, David Bednar, Antonín Pavelka, Martin Manak, Martin Bezdeka, Petr Benes, Matus Kotry, Artur Góra, Jirí Damborský, Jiri Sochor:
CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures. Bioinform. 30(18): 2684-2685 (2014) - [c2]Ondrej Strnad, Barbora Kozlíková, Jiri Sochor:
Detection of Intramolecular Tunnels Connecting Sequence of Sites in Protein Structures. PACBB 2014: 73-80 - [c1]Barbora Kozlíková, Adam Jurcík, Jan Byska, Ondrej Strnad, Jiri Sochor:
Visualizing Movements of Protein Tunnels in Molecular Dynamics Simulations. VCBM 2014: 97-106 - 2012
- [j1]Eva Chovancová, Antonín Pavelka, Petr Benes, Ondrej Strnad, Jan Brezovsky, Barbora Kozlíková, Artur Góra, Vilém Sustr, Martin Klvana, Petr Medek, Lada Biedermannová, Jiri Sochor, Jirí Damborský:
CAVER 3.0: A Tool for the Analysis of Transport Pathways in Dynamic Protein Structures. PLoS Comput. Biol. 8(10) (2012)
Coauthor Index
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