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2020 – today
- 2024
[j48]Dan Ofer
, Michal Linial:
Automated annotation of disease subtypes. J. Biomed. Informatics 154: 104650 (2024)- 2023
- [i2]Dan Ofer, Michal Linial:
Whats next? Forecasting scientific research trends. CoRR abs/2305.04133 (2023) - 2022
- [j47]Nadav Brandes, Dan Ofer, Yam Peleg, Nadav Rappoport, Michal Linial:
ProteinBERT: a universal deep-learning model of protein sequence and function. Bioinform. 38(8): 2102-2110 (2022) - 2020
- [j46]Kerem Wainer-Katsir, Michal Linial:
BIRD: identifying cell doublets via biallelic expression from single cells. Bioinform. 36(Supplement-1): i251-i257 (2020) - [c17]Nadav Brandes, Nathan Linial, Michal Linial:
Functional Evolutionary Modeling Exposes Overlooked Protein-Coding Genes Involved in Cancer. ISBRA 2020: 119-126 - [c16]Nadav Brandes, Nathan Linial, Michal Linial:
PWAS: Proteome-Wide Association Study. RECOMB 2020: 237-239
2010 – 2019
- 2019
- [j45]Shelly Mahlab-Aviv, Nathan Linial, Michal Linial:
A cell-based probabilistic approach unveils the concerted action of miRNAs. PLoS Comput. Biol. 15(12) (2019) - 2016
- [j44]Nadav Brandes, Dan Ofer, Michal Linial:
ASAP: a machine learning framework for local protein properties. Database J. Biol. Databases Curation 2016 (2016) - 2015
- [j43]Nadav Rappoport, Michal Linial:
ProtoBug: functional families from the complete proteomes of insects. Database J. Biol. Databases Curation 2015 (2015) - [j42]Peter D. Karp, Bonnie Berger, Diane E. Kovats, Thomas Lengauer, Michal Linial, Pardis Sabeti, Winston Hide, Burkhard Rost:
Message from the ISCB: ISCB Ebola award for important future research on the computational biology of Ebola virus. Bioinform. 31(4): 616-617 (2015) - [j41]Dan Ofer, Michal Linial:
ProFET: Feature engineering captures high-level protein functions. Bioinform. 31(21): 3429-3436 (2015) - [j40]Peter D. Karp, Bonnie Berger, Diane E. Kovats, Thomas Lengauer, Michal Linial, Pardis Sabeti, Winston Hide, Burkhard Rost:
ISCB Ebola Award for Important Future Research on the Computational Biology of Ebola Virus. PLoS Comput. Biol. 11(1) (2015) - 2014
- [j39]Yitzhak Friedman, Solange Karsenty, Michal Linial:
miRror-Suite: decoding coordinated regulation by microRNAs. Database J. Biol. Databases Curation 2014 (2014) - [j38]Andreas W. M. Dress, Michal Linial, Olga G. Troyanskaya, Martin Vingron:
ISCB/SPRINGER series in computational biology. Bioinform. 30(1): 146-147 (2014) - [j37]Dan Ofer, Michal Linial:
NeuroPID: a predictor for identifying neuropeptide precursors from metazoan proteomes. Bioinform. 30(7): 931-940 (2014) - [j36]Mark N. Wass, Sean D. Mooney, Michal Linial, Predrag Radivojac, Iddo Friedberg:
The automated function prediction SIG looks back at 2013 and prepares for 2014. Bioinform. 30(14): 2091-2092 (2014) - [j35]Nadav Rappoport, Amos Stern, Nathan Linial, Michal Linial:
Entropy-driven partitioning of the hierarchical protein space. Bioinform. 30(17): 624-630 (2014) - [j34]Solange Karsenty, Nadav Rappoport, Dan Ofer, Adva Zair, Michal Linial:
NeuroPID: a classifier of neuropeptide precursors. Nucleic Acids Res. 42(Webserver-Issue): 182-186 (2014) - [j33]Shelly Mahlab, Michal Linial:
Speed Controls in Translating Secretory Proteins in Eukaryotes - an Evolutionary Perspective. PLoS Comput. Biol. 10(1) (2014) - 2013
- [j32]Nadav Rappoport, Michal Linial:
Functional inference by ProtoNet family tree: the uncharacterized proteome of Daphnia pulex. BMC Bioinform. 14(S-3): S11 (2013) - [j31]Yitzhak Friedman, Michal Linial:
Mirror2.0: a Platform for Assessing the Joint Action of microRNAs in Cell regulation. J. Bioinform. Comput. Biol. 11(6) (2013) - [c15]Shelly Mahlab, Itai Linial, Michal Linial:
Translation Efficiency of Synaptic Proteins and Its Coding Sequence Determinants. BIOINFORMATICS 2013: 151-157 - 2012
- [j30]Guy Naamati, Yitzhak Friedman, Ohad Balaga, Michal Linial:
Susceptibility of the human pathways graphs to fragmentation by small sets of microRNAs. Bioinform. 28(7): 983-990 (2012) - [j29]Burkhard Rost, Terry Gaasterland, Thomas Lengauer, Michal Linial, Scott Markel, B. J. Morrison McKay, Reinhard Schneider, Paul Horton, Janet Kelso:
Paving the future: finding suitable ISMB venues. Bioinform. 28(19): 2556-2559 (2012) - [j28]Nadav Rappoport, Solange Karsenty, Amos Stern, Nathan Linial, Michal Linial:
ProtoNet 6.0: organizing 10 million protein sequences in a compact hierarchical family tree. Nucleic Acids Res. 40(Database-Issue): 313-320 (2012) - [j27]Nadav Rappoport, Michal Linial:
Viral Proteins Acquired from a Host Converge to Simplified Domain Architectures. PLoS Comput. Biol. 8(2) (2012) - 2011
- [j26]Yosef Prat, Menachem Fromer, Nathan Linial, Michal Linial:
Recovering key biological constituents through sparse representation of gene expression. Bioinform. 27(5): 655-661 (2011) - [j25]Regev Schweiger, Michal Linial, Nathan Linial:
Generative probabilistic models for protein-protein interaction networks - the biclique perspective. Bioinform. 27(13): 142-148 (2011) - [j24]Manor Askenazi, Michal Linial:
ARISTO: ontological classification of small molecules by electron ionization-mass spectrometry. Nucleic Acids Res. 39(Web-Server-Issue): 505-510 (2011) - [c14]Yosef Prat, Menachem Fromer, Michal Linial, Nathan Linial:
Geometric Interpretation of Gene Expression by Sparse Reconstruction of Transcript Profiles. RECOMB 2011: 355-357 - 2010
- [j23]Yitzhak Friedman, Guy Naamati, Michal Linial:
MiRror: a combinatorial analysis web tool for ensembles of microRNAs and their targets. Bioinform. 26(15): 1920-1921 (2010) - [j22]Menachem Fromer, Michal Linial:
Exposing the co-adaptive potential of protein-protein interfaces through computational sequence design. Bioinform. 26(18): 2266-2272 (2010) - [j21]Guy Naamati, Manor Askenazi, Michal Linial:
A predictor for toxin-like proteins exposes cell modulator candidates within viral genomes. Bioinform. 26(18) (2010) - [j20]Menachem Fromer, Chen Yanover, Amir Harel, Ori Shachar, Yair Weiss, Michal Linial:
SPRINT: side-chain prediction inference toolbox for multistate protein design. Bioinform. 26(19): 2466-2467 (2010) - [j19]Assaf Gottlieb, Roy Varshavsky, Michal Linial, David Horn:
UFFizi: a generic platform for ranking informative features. BMC Bioinform. 11: 300 (2010) - [j18]Nadav Rappoport, Menachem Fromer, Regev Schweiger, Michal Linial:
PANDORA: analysis of protein and peptide sets through the hierarchical integration of annotations. Nucleic Acids Res. 38(Web-Server-Issue): 84-89 (2010)
2000 – 2009
- 2009
- [j17]Guy Naamati, Manor Askenazi, Michal Linial:
ClanTox: a classifier of short animal toxins. Nucleic Acids Res. 37(Web-Server-Issue): 363-368 (2009) - 2008
- [j16]Michal Linial, Jill P. Mesirov, B. J. Morrison McKay, Burkhard Rost:
ISMB 2008 Toronto. PLoS Comput. Biol. 4(6) (2008) - [c13]Yaniv Loewenstein, Michal Linial:
Connect the dots: exposing hidden protein family connections from the entire sequence tree. ECCB 2008: 193-199 - [c12]Yaniv Loewenstein, Elon Portugaly, Menachem Fromer, Michal Linial:
Efficient algorithms for accurate hierarchical clustering of huge datasets: tackling the entire protein space. ISMB 2008: 41-49 - [e2]Mourad Elloumi, Josef Küng, Michal Linial, Robert F. Murphy, Kristan Schneider, Cristian Toma:
Bioinformatics Research and Development, Second International Conference, BIRD 2008, Vienna, Austria, July 7-9, 2008, Proceedings. Communications in Computer and Information Science 13, Springer 2008, ISBN 978-3-540-70598-7 [contents] - [e1]Christian G. Huber, Oliver Kohlbacher, Michal Linial, Kathrin Marcus, Knut Reinert:
Computational Proteomics, 02.03. - 07.03.2008. Dagstuhl Seminar Proceedings 08101, Internationales Begegnungs- und Forschungszentrum für Informatik (IBFI), Schloss Dagstuhl, Germany 2008 [contents] - [i1]Knut Reinert, Christian G. Huber, Kathrin Marcus, Michal Linial, Oliver Kohlbacher:
08101 Abstracts Collection - Computational Proteomics. Computational Proteomics 2008 - 2007
- [j15]Roy Varshavsky, Assaf Gottlieb, David Horn, Michal Linial:
Unsupervised feature selection under perturbations: meeting the challenges of biological data. Bioinform. 23(24): 3343-3349 (2007) - [j14]Elon Portugaly, Nathan Linial, Michal Linial:
EVEREST: a collection of evolutionary conserved protein domains. Nucleic Acids Res. 35(Database-Issue): 241-246 (2007) - [c11]Roy Varshavsky, David Horn, Michal Linial:
Clustering Algorithms Optimizer: A Framework for Large Datasets. ISBRA 2007: 85-96 - [c10]Roy Varshavsky, Menachem Fromer, Amit Man, Michal Linial:
When Less Is More: Improving Classification of Protein Families with a Minimal Set of Global Features. WABI 2007: 12-24 - 2006
- [j13]Michal Linial:
The Secrets of a Functional Synapse - From a Computational and Experimental Viewpoint. BMC Bioinform. 7(S-1) (2006) - [j12]Elon Portugaly, Amir Harel, Nathan Linial, Michal Linial:
EVEREST: automatic identification and classification of protein domains in all protein sequences. BMC Bioinform. 7: 277 (2006) - [c9]Roy Varshavsky, Assaf Gottlieb, Michal Linial, David Horn:
Novel Unsupervised Feature Filtering of Biological Data. ISMB (Supplement of Bioinformatics) 2006: 507-513 - 2005
- [j11]Ilona Kifer, Ori Sasson, Michal Linial:
Predicting fold novelty based on ProtoNet hierarchical classification. Bioinform. 21(7): 1020-1027 (2005) - [j10]Noam Kaplan, Michal Linial:
Automatic detection of false annotations via binary property clustering. BMC Bioinform. 6: 46 (2005) - [j9]Noam Kaplan, Ori Sasson, Uri Inbar, Moriah Friedlich, Menachem Fromer, Hillel Fleischer, Elon Portugaly, Nathan Linial, Michal Linial:
ProtoNet 4.0: A hierarchical classification of one million protein sequences. Nucleic Acids Res. 33(Database-Issue): 216-218 (2005) - [j8]Ori Sasson, Michal Linial:
ProTarget: automatic prediction of protein structure novelty. Nucleic Acids Res. 33(Web-Server-Issue): 81-84 (2005) - [j7]Iris Bahir, Michal Linial:
ProTeus: identifying signatures in protein termini. Nucleic Acids Res. 33(Web-Server-Issue): 277-280 (2005) - [c8]Tali Sadka, Michal Linial:
Families of membranous proteins can be characterized by the amino acid composition of their transmembrane domains. ISMB (Supplement of Bioinformatics) 2005: 378-386 - [c7]Roy Varshavsky, Michal Linial, David Horn:
COMPACT: A Comparative Package for Clustering Assessment. ISPA Workshops 2005: 159-167 - 2004
- [j6]Noam Kaplan, Moriah Friedlich, Menachem Fromer, Michal Linial:
A functional hierarchical organization of the protein sequence space. BMC Bioinform. 5: 196 (2004) - 2003
- [j5]Ori Sasson, Avishay Vaaknin, Hillel Fleischer, Elon Portugaly, Yonatan Bilu, Nathan Linial, Michal Linial:
ProtoNet: hierarchical classification of the protein space. Nucleic Acids Res. 31(1): 348-352 (2003) - 2002
- [j4]Elon Portugaly, Ilona Kifer, Michal Linial:
Selecting targets for structural determination by navigating in a graph of protein families. Bioinform. 18(7): 899-907 (2002) - [j3]Yonatan Bilu, Michal Linial:
The Advantage of Functional Prediction Based on Clustering of Yeast Genes and Its Correlation with Non-Sequence Based Classifications. J. Comput. Biol. 9(2): 193-210 (2002) - [c6]Ori Sasson, Nathan Linial, Michal Linial:
The metric space of proteins-comparative study of clustering algorithms. ISMB 2002: 14-21 - [c5]Yonatan Bilu, Michal Linial:
Functional Consequences in Metabolic Pathways from Phylogenetic Profiles. WABI 2002: 263-276 - 2001
- [c4]Yonatan Bilu, Michal Linial:
On the predictive power of sequence similarity in yeast. RECOMB 2001: 39-48 - 2000
- [j2]Nir Friedman, Michal Linial, Iftach Nachman, Dana Pe'er:
Using Bayesian Networks to Analyze Expression Data. J. Comput. Biol. 7(3-4): 601-620 (2000) - [j1]Golan Yona, Nathan Linial, Michal Linial:
ProtoMap: automatic classification of protein sequences and hierarchy of protein families. Nucleic Acids Res. 28(1): 49-55 (2000) - [c3]Nir Friedman, Michal Linial, Iftach Nachman, Dana Pe'er:
Using Bayesian networks to analyze expression data. RECOMB 2000: 127-135 - [c2]Elon Portugaly, Michal Linial:
Probabilities for having a new fold on the basis of a map of all protein sequences. RECOMB 2000: 237-244
1990 – 1999
- 1998
- [c1]Golan Yona, Nathan Linial, Naftali Tishby, Michal Linial:
A Map of the Protein Space: An Automatic Hierarchical Classification of all Protein Sequences. ISMB 1998: 212-221
Coauthor Index
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last updated on 2024-07-20 20:34 CEST by the dblp team
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