Hierarchical feature aggregation with mixed attention mechanism for single-cell RNA-seq analysis. - Zhou, Wanning; Song, Wei; Zhang, Zhuangzhuang; Zhang, Fan; Teng, Zhixia; Tian, Zhen (Expert Syst. Appl., 2025)

Drug repositioning by collaborative learning based on graph convolutional inductive network. - Teng, Zhixia; Li, Yongliang; Tian, Zhen; Liang, Yingjian; Wang, Guohua (Future Gener. Comput. Syst., 2025)

DSANIB: Drug-Target Interaction Predictions With Dual-View Synergistic Attention Network and Information Bottleneck Strategy. - Tian, Zhen; Zhang, Zhuangzhuang; Zhou, Wanning; Teng, Zhixia; Song, Wei; Zou, Quan (IEEE J. Biomed. Health Informatics, 2025)

MGCNSS: miRNA-disease association prediction with multi-layer graph convolution and distance-based negative sample selection strategy. - Tian, Zhen; Han, Chenguang; Xu, Lewen; Teng, Zhixia; Song, Wei (Briefings Bioinform., 2024)

Constructing discriminative feature space for LncRNA-protein interaction based on deep autoencoder and marginal fisher analysis. - Teng, Zhixia; Zhang, Yiran; Dai, Qiguo; Wu, Chengyan; Li, Dan (Comput. Biol. Medicine, 2023)

GOGCN: Graph Convolutional Network on Gene Ontology for Functional Similarity Analysis of Genes. - Tian, Zhen; Fang, Haichuan; Teng, Zhixia; Ye, Yangdong (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)

Predicting miRNA-disease associations via learning multimodal networks and fusing mixed neighborhood information. - Lou, Zhengzheng; Cheng, Zhaoxu; Li, Hui; Teng, Zhixia; Liu, Yang; Tian, Zhen (Briefings Bioinform., 2022)

ReRF-Pred: predicting amyloidogenic regions of proteins based on their pseudo amino acid composition and tripeptide composition. - Teng, Zhixia; Zhang, Zitong; Tian, Zhen; Li, Yanjuan; Wang, Guohua (BMC Bioinform., 2021)

Integrated Learning: Screening Optimal Biomarkers for Identifying Preeclampsia in Placental mRNA Samples. - Guo, Rong; Teng, Zhixia; Wang, Yiding; Zhou, Xin; Xu, Heze; Liu, Dan (Comput. Math. Methods Medicine, 2021)

SMOPredT4SE: An Effective Prediction of Bacterial Type IV Secreted Effectors Using SVM Training With SMO. - Yan, Zihao; Chen, Dong; Teng, Zhixia; Wang, Donghua; Li, Yanjuan (IEEE Access, 2020)

The Classification of Enzymes by Deep Learning. - Tao, Zhiyu; Dong, BenZhi; Teng, Zhixia; Zhao, Yuming (IEEE Access, 2020)

PredAmyl-MLP: Prediction of Amyloid Proteins Using Multilayer Perceptron. - Li, Yanjuan; Zhang, Zitong; Teng, Zhixia; Liu, Xiaoyan (Comput. Math. Methods Medicine, 2020)

A Method for Identifying Vesicle Transport Proteins Based on LibSVM and MRMD. - Tao, Zhiyu; Li, Yanjuan; Teng, Zhixia; Zhao, Yuming (Comput. Math. Methods Medicine, 2020)

Computational drug repositioning using meta-path-based semantic network analysis. - Tian, Zhen; Teng, Zhixia; Cheng, Shuang; Guo, Maozu (BMC Syst. Biol., 2018)

Revealing protein functions based on relationships of interacting proteins and GO terms. - Teng, Zhixia; Guo, Maozu; Liu, Xiaoyan; Tian, Zhen; Che, Kai (J. Biomed. Semant., 2017)

SGFSC: speeding the gene functional similarity calculation based on hash tables. - Tian, Zhen; Wang, Chunyu; Guo, Maozu; Liu, Xiaoyan; Teng, Zhixia (BMC Bioinform., 2016)

An improved method for functional similarity analysis of genes based on Gene Ontology. - Tian, Zhen; Wang, Chunyu; Guo, Maozu; Liu, Xiaoyan; Teng, Zhixia (BMC Syst. Biol., 2016)

Revealing protein functions based on relationships of interacting proteins and GO terms. - Teng, Zhixia; Guo, Maozu; Liu, Xiaoyan; Tian, Zhen; Che, Kai (2016)

CPL: Detecting Protein Complexes by Propagating Labels on Protein-Protein Interaction Network. - Dai, Qiguo; Guo, Mao-Zu; Liu, Xiao-Yan; Teng, Zhixia; Wang, Chunyu (J. Comput. Sci. Technol., 2014)

Measuring gene functional similarity based on group-wise comparison of GO terms. - Teng, Zhixia; Guo, Maozu; Liu, Xiaoyan; Dai, Qiguo; Wang, Chun-yu; Xuan, Ping (Bioinform., 2013)