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Tim J. Adler
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2020 – today
- 2024
[j10]Jan-Hinrich Nölke
, Tim J. Adler, Melanie Schellenberg, Kris K. Dreher, Niklas Holzwarth, Christoph J. Bender, Minu Dietlinde Tizabi, Alexander Seitel, Lena Maier-Hein:
Photoacoustic Quantification of Tissue Oxygenation Using Conditional Invertible Neural Networks. IEEE Trans. Medical Imaging 43(9): 3366-3376 (2024)- 2023
- [b1]Tim Adler:
Uncertainty Quantification in Biophotonic Imaging using Invertible Neural Networks. Heidelberg University, Germany, 2023 - [j9]Thuy Nuong Tran, Tim J. Adler, Amine Yamlahi, Evangelia Christodoulou, Patrick Godau, Annika Reinke, Minu Dietlinde Tizabi, Peter Sauer, Tillmann Persicke, Jörg Gerhard Albert, Lena Maier-Hein:
Sources of performance variability in deep learning-based polyp detection. Int. J. Comput. Assist. Radiol. Surg. 18(7): 1311-1322 (2023) - [j8]Tobias Roß, Pierangela Bruno, Annika Reinke, Manuel Wiesenfarth, Lisa Koeppel, Peter M. Full, Bünyamin Pekdemir, Patrick Godau, Darya Trofimova, Fabian Isensee, Tim J. Adler, Thuy Nuong Tran, Sara Moccia, Francesco Calimeri, Beat P. Müller-Stich, Annette Kopp-Schneider, Lena Maier-Hein:
Beyond rankings: Learning (more) from algorithm validation. Medical Image Anal. 86: 102765 (2023) - [c8]David Zimmerer, Peter M. Full, Fabian Isensee, Paul Jäger, Tim Adler, Jens Petersen, Gregor Köhler, Tobias Roß, Annika Reinke, Antanas Kascenas, Bjørn Sand Jensen, Alison Q. O'Neil, Jeremy Tan, Benjamin Hou, James Batten, Huaqi Qiu, Bernhard Kainz, Nina Shvetsova, Irina Fedulova, Dmitry V. Dylov, Baolun Yu, Jianyang Zhai, Jingtao Hu, Runxuan Si, Sihang Zhou, Siqi Wang, Xinyang Li, Xuerun Chen, Yang Zhao, Sergio Naval Marimont, Giacomo Tarroni, Victor Saase, Lena Maier-Hein, Klaus H. Maier-Hein:
Abstract: MOOD 2020 - A Public Benchmark for Out-of-distribution Detection and Localization on Medical Images. Bildverarbeitung für die Medizin 2023: 312 - [c7]Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Sharib Ali, Vincent Andrearczyk, Marc Aubreville, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Veronika Cheplygina, Marie Daum, Marleen de Bruijne, Adrien Depeursinge, Reuben Dorent, Jan Egger, David G. Ellis, Sandy Engelhardt, Melanie Ganz, Noha M. Ghatwary, Gabriel Girard, Patrick Godau, Anubha Gupta, Lasse Hansen, Kanako Harada, Mattias P. Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Pierre Jannin, A. Emre Kavur, Oldrich Kodym, Michal Kozubek, Jianning Li, Hongwei Bran Li, Jun Ma, Carlos Martín-Isla, Bjoern H. Menze, J. Alison Noble, Valentin Oreiller, Nicolas Padoy, Sarthak Pati, Kelly Payette, Tim Rädsch, Jonathan Rafael-Patino, Vivek Singh Bawa, Stefanie Speidel, Carole H. Sudre, Kimberlin M. H. van Wijnen, Martin Wagner, D. Wei, Amine Yamlahi, Moi Hoon Yap, C. Yuan, Maximilian Zenk, A. Zia, David Zimmerer, Dogu Baran Aydogan, Binod Bhattarai, Louise Bloch, Raphael Brüngel, J. Cho, C. Choi, Q. Dou, Ivan Ezhov, Christoph M. Friedrich, C. Fuller, Rebati Raman Gaire, Adrian Galdran, Álvaro García-Faura, Maria Grammatikopoulou, S. Hong, Mostafa Jahanifar, I. Jang, Abdolrahim Kadkhodamohammadi, I. Kang, Florian Kofler, S. Kondo, Hugo Jaco Kuijf, M. Li, M. Luu, Tomaz Martincic, Pedro Morais, Mohamed A. Naser, Bruno Oliveira, David Owen, S. Pang, J. Park, S. Park, Szymon Plotka, Élodie Puybareau, Nasir M. Rajpoot, K. Ryu, Numan Saeed, Adam Shephard, Pengcheng Shi, Dejan Stepec, Ronast Subedi, Guillaume Tochon, Helena R. Torres, Hélène Urien, João L. Vilaça, Kareem A. Wahid, H. Wang, J. Wang, L. Wang, X. Wang, Benedikt Wiestler, Marek Wodzinski, F. Xia, J. Xie, Z. Xiong, S. Yang, Y. Yang, Z. Zhao, Klaus H. Maier-Hein, Paul F. Jäger, Annette Kopp-Schneider, Lena Maier-Hein:
Why is the Winner the Best? CVPR 2023: 19955-19966 - [c6]Amine Yamlahi, Thuy Nuong Tran, Patrick Godau, Melanie Schellenberg, Dominik Michael, Finn-Henri Smidt, Jan-Hinrich Nölke, Tim J. Adler, Minu Dietlinde Tizabi, Chinedu Innocent Nwoye, Nicolas Padoy, Lena Maier-Hein:
Self-distillation for Surgical Action Recognition. MICCAI (9) 2023: 637-646 - [c5]Kris K. Dreher, Leonardo Ayala, Melanie Schellenberg, Marco Hübner, Jan-Hinrich Nölke, Tim J. Adler, Silvia Seidlitz, Jan Sellner, Alexander Studier-Fischer, Janek Gröhl, Felix Nickel, Ullrich Köthe, Alexander Seitel, Lena Maier-Hein:
Unsupervised Domain Transfer with Conditional Invertible Neural Networks. MICCAI (1) 2023: 770-780 - [d3]Leonardo Ayala, Tim Adler, Silvia Seidlitz, Sebastian J. Wirkert, Alexander Seitel, Jan Sellner, Anant Vemuri, Manuel Wiesenfarth, Nicholas Schreck, Sebastian Pirmann, Annette Kopp-Schneider, Lena Maier-Hein:
Spectral imaging enables contrast agent-free real-time ischemia monitoring in laparoscopic surgery. Zenodo, 2023
- [i14]Kris K. Dreher, Leonardo Ayala, Melanie Schellenberg, Marco Hübner, Jan-Hinrich Nölke, Tim J. Adler, Silvia Seidlitz, Jan Sellner, Alexander Studier-Fischer, Janek Gröhl, Felix Nickel, Ullrich Köthe, Alexander Seitel, Lena Maier-Hein:
Unsupervised Domain Transfer with Conditional Invertible Neural Networks. CoRR abs/2303.10191 (2023) - [i13]Amine Yamlahi, Thuy Nuong Tran, Patrick Godau, Melanie Schellenberg, Dominik Michael, Finn-Henri Smidt, Jan-Hinrich Nölke, Tim Adler, Minu Dietlinde Tizabi, Chinedu Innocent Nwoye, Nicolas Padoy, Lena Maier-Hein:
Self-distillation for surgical action recognition. CoRR abs/2303.12915 (2023) - [i12]Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Sharib Ali, Vincent Andrearczyk, Marc Aubreville, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Veronika Cheplygina, Marie Daum, Marleen de Bruijne, Adrien Depeursinge, Reuben Dorent, Jan Egger, David G. Ellis, Sandy Engelhardt, Melanie Ganz, Noha M. Ghatwary, Gabriel Girard, Patrick Godau, Anubha Gupta, Lasse Hansen, Kanako Harada, Mattias P. Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Pierre Jannin, Ali Emre Kavur, Oldrich Kodym, Michal Kozubek, Jianning Li, Hongwei Bran Li, Jun Ma, Carlos Martín-Isla, Bjoern H. Menze, J. Alison Noble, Valentin Oreiller, Nicolas Padoy, Sarthak Pati, Kelly Payette, Tim Rädsch, et al.:
Why is the winner the best? CoRR abs/2303.17719 (2023) - [i11]Tim J. Adler, Jan-Hinrich Nölke, Annika Reinke, Minu Dietlinde Tizabi, Sebastian Gruber, Dasha Trofimova, Lynton Ardizzone, Paul F. Jaeger, Florian Büttner, Ullrich Köthe, Lena Maier-Hein:
Application-driven Validation of Posteriors in Inverse Problems. CoRR abs/2309.09764 (2023) - 2022
- [j7]Lucas-Raphael Müller, Jens Petersen, Amine Yamlahi, Philipp Wise, Tim J. Adler, Alexander Seitel, Karl-Friedrich Kowalewski, Beat Müller, Hannes Kenngott, Felix Nickel, Lena Maier-Hein:
Robust hand tracking for surgical telestration. Int. J. Comput. Assist. Radiol. Surg. 17(8): 1477-1486 (2022) - [j6]Lucas-Raphael Müller, Jens Petersen, Amine Yamlahi, Philipp Wise, Tim J. Adler, Alexander Seitel, Karl-Friedrich Kowalewski, Beat Müller, Hannes Kenngott, Felix Nickel, Lena Maier-Hein:
Correction to: Robust hand tracking for surgical telestration. Int. J. Comput. Assist. Radiol. Surg. 17(8): 1487 (2022) - [j5]Silvia Seidlitz, Jan Sellner, Jan Odenthal, Berkin Özdemir, Alexander Studier-Fischer, Samuel Knödler, Leonardo Ayala, Tim J. Adler, Hannes Götz Kenngott, Minu Tizabi, Martin Wagner, Felix Nickel, Beat P. Müller-Stich, Lena Maier-Hein:
Robust deep learning-based semantic organ segmentation in hyperspectral images. Medical Image Anal. 80: 102488 (2022) - [j4]David Zimmerer, Peter M. Full, Fabian Isensee, Paul Jäger, Tim Adler, Jens Petersen, Gregor Köhler, Tobias Roß, Annika Reinke, Antanas Kascenas, Bjørn Sand Jensen, Alison Q. O'Neil, Jeremy Tan, Benjamin Hou, James Batten, Huaqi Qiu, Bernhard Kainz, Nina Shvetsova, Irina Fedulova, Dmitry V. Dylov, Baolun Yu, Jianyang Zhai, Jingtao Hu, Runxuan Si, Sihang Zhou, Siqi Wang, Xinyang Li, Xuerun Chen, Yang Zhao, Sergio Naval Marimont, Giacomo Tarroni, Victor Saase, Lena Maier-Hein, Klaus H. Maier-Hein:
MOOD 2020: A Public Benchmark for Out-of-Distribution Detection and Localization on Medical Images. IEEE Trans. Medical Imaging 41(10): 2728-2738 (2022) - [c4]Thuy Nuong Tran, Fabian Isensee, Lars Krämer, Amine Yamlahi, Tim Adler, Patrick Godau, Minu Tizabi, Lena Maier-Hein:
Heterogeneous Model Ensemble For Automatic Polyp Segmentation In Endoscopic Video Sequences. EndoCV@ISBI 2022: 20-24 - [c3]Amine Yamlahi, Patrick Godau, Thuy Nuong Tran, Lucas-Raphael Muller, Tim Adler, Minu Tizabi, Michael Baumgartner, Paul Jäger, Lena Maier-Hein:
Heterogeneous Model Ensemble For Automatic Polyp Detection and Tracking In Colonoscopy. EndoCV@ISBI 2022: 25-28 - [i10]Thuy Nuong Tran, Tim Adler, Amine Yamlahi, Evangelia Christodoulou, Patrick Godau, Annika Reinke, Minu Dietlinde Tizabi, Peter Sauer, Tillmann Persicke, Jörg Gerhard Albert, Lena Maier-Hein:
Sources of performance variability in deep learning-based polyp detection. CoRR abs/2211.09708 (2022) - [i9]Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Patrick Godau, Veronika Cheplygina, Michal Kozubek, Sharib Ali, Anubha Gupta, Jan Kybic, J. Alison Noble, Carlos Ortiz-de-Solórzano, Samiksha Pachade, Caroline Petitjean, Daniel Sage, Donglai Wei, Elizabeth Wilden, Deepak Alapatt, Vincent Andrearczyk, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Vivek Singh Bawa, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Jinwook Choi, Olivier Commowick, Marie Daum, Adrien Depeursinge, Reuben Dorent, Jan Egger, Hannah Eichhorn, Sandy Engelhardt, Melanie Ganz, Gabriel Girard, Lasse Hansen, Mattias P. Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Hyunjeong Kim, Bennett A. Landman, Hongwei Bran Li, Jianning Li, Jun Ma, Anne L. Martel, et al.:
Biomedical image analysis competitions: The state of current participation practice. CoRR abs/2212.08568 (2022) - 2021
- [c2]Jan-Hinrich Nölke, Tim Adler, Janek Gröhl, Thomas Kirchner, Lynton Ardizzone, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Invertible Neural Networks for Uncertainty Quantification in Photoacoustic Imaging. Bildverarbeitung für die Medizin 2021: 330-335 - [i8]Leonardo Ayala, Sebastian J. Wirkert, Anant Vemuri, Tim Adler, Silvia Seidlitz, Sebastian Pirmann, Christina Engels, Dogu Teber, Lena Maier-Hein:
Video-rate multispectral imaging in laparoscopic surgery: First-in-human application. CoRR abs/2105.13901 (2021) - [i7]Silvia Seidlitz, Jan Sellner, Jan Odenthal, Berkin Özdemir, Alexander Studier-Fischer, Samuel Knödler, Leonardo Ayala, Tim Adler, Hannes Götz Kenngott, Minu Tizabi, Martin Wagner, Felix Nickel, Beat P. Müller-Stich, Lena Maier-Hein:
Robust deep learning-based semantic organ segmentation in hyperspectral images. CoRR abs/2111.05408 (2021) - 2020
- [j3]Leonardo Ayala, Silvia Seidlitz, Anant Vemuri, Sebastian J. Wirkert, Thomas Kirchner, Tim J. Adler, Christina Engels, Dogu Teber, Lena Maier-Hein:
Light source calibration for multispectral imaging in surgery. Int. J. Comput. Assist. Radiol. Surg. 15(7): 1117-1125 (2020) - [d2]Janek Gröhl, Thomas Kirchner, Tim J. Adler, Lina Hacker, Niklas Holzwarth, Adrián Hernández-Aguilera, Mildred A. Herrera, Edgar Santos, Sarah E. Bohndiek, Lena Maier-Hein:
Supplementary code and data for "Learned spectral decoloring enables photoacoustic oximetry". Zenodo, 2020 - [i6]Lena Maier-Hein, Martin Wagner, Tobias Roß, Annika Reinke, Sebastian Bodenstedt, Peter M. Full, Hellena Hempe, Diana Mîndroc-Filimon, Patrick Scholz, Thuy Nuong Tran, Pierangela Bruno, Anna Kisilenko, Benjamin Müller, Tornike Davitashvili, Manuela Capek, Minu Tizabi, Matthias Eisenmann, Tim J. Adler, Janek Gröhl, Melanie Schellenberg, Silvia Seidlitz, T. Y. Emmy Lai, Veith Roethlingshoefer, Fabian Both, Sebastian Bittel, Marc Mengler, Martin Apitz, Stefanie Speidel, Hannes Götz Kenngott, Beat P. Müller-Stich:
Heidelberg Colorectal Data Set for Surgical Data Science in the Sensor Operating Room. CoRR abs/2005.03501 (2020) - [i5]Jan-Hinrich Nölke, Tim Adler, Janek Gröhl, Thomas Kirchner, Lynton Ardizzone, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Invertible Neural Networks for Uncertainty Quantification in Photoacoustic Imaging. CoRR abs/2011.05110 (2020) - [i4]Darya Trofimova, Tim Adler, Lisa Kausch, Lynton Ardizzone, Klaus H. Maier-Hein, Ullrich Köthe, Carsten Rother, Lena Maier-Hein:
Representing Ambiguity in Registration Problems with Conditional Invertible Neural Networks. CoRR abs/2012.08195 (2020)
2010 – 2019
- 2019
- [j2]Tim J. Adler, Lynton Ardizzone, Anant Suraj Vemuri, Leonardo Ayala, Janek Gröhl, Thomas Kirchner, Sebastian J. Wirkert, Jakob Kruse, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Uncertainty-aware performance assessment of optical imaging modalities with invertible neural networks. Int. J. Comput. Assist. Radiol. Surg. 14(6): 997-1007 (2019) - [c1]Tim J. Adler, Leonardo Ayala, Lynton Ardizzone, Hannes Kenngott, Anant Suraj Vemuri, Beat P. Müller-Stich, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Out of Distribution Detection for Intra-operative Functional Imaging. UNSURE/CLIP@MICCAI 2019: 75-82 - [i3]Janek Gröhl, Thomas Kirchner, Tim Adler, Lena Maier-Hein:
Estimation of blood oxygenation with learned spectral decoloring for quantitative photoacoustic imaging (LSD-qPAI). CoRR abs/1902.05839 (2019) - [i2]Tim J. Adler, Lynton Ardizzone, Anant Suraj Vemuri, Leonardo Ayala, Janek Gröhl, Thomas Kirchner, Sebastian J. Wirkert, Jakob Kruse, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Uncertainty-aware performance assessment of optical imaging modalities with invertible neural networks. CoRR abs/1903.03441 (2019) - [i1]Tim J. Adler, Leonardo Ayala, Lynton Ardizzone, Hannes Kenngott, Anant Suraj Vemuri, Beat P. Müller-Stich, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Out of distribution detection for intra-operative functional imaging. CoRR abs/1911.01877 (2019) - 2018
- [j1]Janek Gröhl, Thomas Kirchner, Tim Adler, Lena Maier-Hein:
Confidence Estimation for Machine Learning-Based Quantitative Photoacoustics. J. Imaging 4(12): 147 (2018) - [d1]Janek Gröhl, Thomas Kirchner, Tim Adler, Lena Maier-Hein:
In silico 2D photoacoustic imaging data. Zenodo, 2018
Coauthor Index
Minu Tizabi
aka: Minu Dietlinde Tizabi
aka: Minu Dietlinde Tizabi
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