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ORCIDIvan Ovcharenko
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2020 – today
- 2023
[j14]Christopher Hill, Sanjarbek Hudaiberdiev, Ivan Ovcharenko:
ChromDL: a next-generation regulatory DNA classifier. Bioinform. 39(Supplement-1): 377-385 (2023)
2010 – 2019
- 2018
- [j13]Roberto Vera Alvarez
, Shan Li, David Landsman, Ivan Ovcharenko:
SNPDelScore: combining multiple methods to score deleterious effects of noncoding mutations in the human genome. Bioinform. 34(2): 289-291 (2018) - [j12]Mario A. Flores, Ivan Ovcharenko:
Enhancer reprogramming in mammalian genomes. BMC Bioinform. 19(1): 316:1-316:10 (2018) - 2012
- [j11]Leila Taher, Leelavati Narlikar, Ivan Ovcharenko:
CLARE: Cracking the LAnguage of Regulatory Elements. Bioinform. 28(4): 581-583 (2012) - [j10]Hani Z. Girgis, Ivan Ovcharenko:
Predicting tissue specific cis-regulatory modules in the human genome using pairs of co-occurring motifs. BMC Bioinform. 13: 25 (2012) - 2010
- [c2]Ivan Ovcharenko:
Structure of Proximal and Distant Regulatory Elements in the Human Genome. ISBRA 2010: 125
2000 – 2009
- 2009
- [j9]Leila Taher, Ivan Ovcharenko:
Variable locus length in the human genome leads to ascertainment bias in functional inference for non-coding elements. Bioinform. 25(5): 578-584 (2009) - 2008
- [j8]Valer Gotea, Ivan Ovcharenko:
DiRE: identifying distant regulatory elements of co-expressed genes. Nucleic Acids Res. 36(Web-Server-Issue): 133-139 (2008) - 2007
- [j7]Gabriela G. Loots, Ivan Ovcharenko:
ECRbase: database of evolutionary conserved regions, promoters, and transcription factor binding sites in vertebrate genomes. Bioinform. 23(1): 122-124 (2007) - 2006
- [j6]Gabriela G. Loots, Patrick S. G. Chain, Shalini Mabery, Amy Rasley, Emilio Garcia, Ivan Ovcharenko:
Array2BIO: from microarray expression data to functional annotation of co-regulated genes. BMC Bioinform. 7: 307 (2006) - 2005
- [j5]Gabriela G. Loots, Ivan Ovcharenko:
Dcode.org anthology of comparative genomic tools. Nucleic Acids Res. 33(Web-Server-Issue): 56-64 (2005) - [j4]Ivan Ovcharenko, Marcelo A. Nobrega:
Identifying synonymous regulatory elements in vertebrate genomes. Nucleic Acids Res. 33(Web-Server-Issue): 403-407 (2005) - 2004
- [j3]Gabriela G. Loots, Ivan Ovcharenko:
rVISTA 2.0: evolutionary analysis of transcription factor binding sites. Nucleic Acids Res. 32(Web-Server-Issue): 217-221 (2004) - [j2]Roded Sharan, Asa Ben-Hur, Gabriela G. Loots, Ivan Ovcharenko:
CREME: Cis-Regulatory Module Explorer for the human genome. Nucleic Acids Res. 32(Web-Server-Issue): 253-256 (2004) - [j1]Ivan Ovcharenko, Marcelo A. Nobrega, Gabriela G. Loots, Lisa Stubbs:
ECR Browser: a tool for visualizing and accessing data from comparisons of multiple vertebrate genomes. Nucleic Acids Res. 32(Web-Server-Issue): 280-286 (2004) - 2003
- [c1]Roded Sharan, Ivan Ovcharenko, Asa Ben-Hur, Richard M. Karp:
CREME: a framework for identifying cis-regulatory modules in human-mouse conserved segments. ISMB (Supplement of Bioinformatics) 2003: 283-291
Coauthor Index
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