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Cathal Seoighe
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2020 – today
- 2024
- [j16]Harrison Anthony, Cathal Seoighe:
Performance assessment of computational tools to detect microsatellite instability. Briefings Bioinform. 25(5) (2024) - [j15]Samuel Rosean, Eric A. Sosa, Donal F. O'Shea, Srilakshmi M. Raj, Cathal Seoighe, John M. Greally:
Regulatory landscape enrichment analysis (RLEA): a computational toolkit for non-coding variant enrichment and cell type prioritization. BMC Bioinform. 25(1): 179 (2024) - 2022
- [j14]Mohammad A. Makrooni, Donal O'Shea, Paul Geeleher, Cathal Seoighe:
Random-effects meta-analysis of effect sizes as a unified framework for gene set analysis. PLoS Comput. Biol. 18(10): 1010278 (2022)
2010 – 2019
- 2016
- [j13]Paul Geeleher, Eric R. Gamazon, Cathal Seoighe, Nancy J. Cox, Rong Stephanie Huang:
Consistency in large pharmacogenomic studies. Nat. 540(7631): E1-E2 (2016) - 2015
- [j12]Peter Keane, Rhodri Ceredig, Cathal Seoighe:
Promiscuous mRNA splicing under the control of AIRE in medullary thymic epithelial cells. Bioinform. 31(7): 986-990 (2015) - [j11]Paul K. Korir, Paul Geeleher, Cathal Seoighe:
Seq-ing improved gene expression estimates from microarrays using machine learning. BMC Bioinform. 16: 286:1-286:11 (2015) - 2013
- [j10]Paul Geeleher, Lori Hartnett, Laurance J. Egan, Aaron Golden, Raja Affendi Raja Ali, Cathal Seoighe:
Gene-set analysis is severely biased when applied to genome-wide methylation data. Bioinform. 29(15): 1851-1857 (2013) - [j9]Renaud Gaujoux, Cathal Seoighe:
CellMix: a comprehensive toolbox for gene expression deconvolution. Bioinform. 29(17): 2211-2212 (2013) - 2011
- [j8]Andre J. Faure, Cathal Seoighe, Nicola J. Mulder:
Investigating the effect of paralogs on microarray gene-set analysis. BMC Bioinform. 12: 29 (2011) - [j7]Cathal Seoighe, Paul K. Korir:
Evidence for intron length conservation in a set of mammalian genes associated with embryonic development. BMC Bioinform. 12(S-9): S16 (2011) - 2010
- [j6]Renaud Gaujoux, Cathal Seoighe:
A flexible R package for nonnegative matrix factorization. BMC Bioinform. 11: 367 (2010)
2000 – 2009
- 2009
- [j5]Wayne Delport, Konrad Scheffler, Cathal Seoighe:
Models of coding sequence evolution. Briefings Bioinform. 10(1): 97-109 (2009) - 2008
- [j4]Graham L. Poulter, Daniel L. Rubin, Russ B. Altman, Cathal Seoighe:
MScanner: a classifier for retrieving Medline citations. BMC Bioinform. 9 (2008) - 2006
- [j3]Konrad Scheffler, Darren P. Martin, Cathal Seoighe:
Robust inference of positive selection from recombining coding sequences. Bioinform. 22(20): 2493-2499 (2006) - [j2]Cathal Seoighe, Victoria Nembaware, Konrad Scheffler:
Maximum likelihood inference of imprinting and allele-specific expression from EST data. Bioinform. 22(24): 3032-3039 (2006) - 2005
- [c2]Cathal Seoighe, Konrad Scheffler:
Very Low Power to Detect Asymmetric Divergence of Duplicated Genes. Comparative Genomics 2005: 142-152 - 2004
- [j1]Estienne C. Swart, Winston A. Hide, Cathal Seoighe:
FRAGS: estimation of coding sequence substitution rates from fragmentary data. BMC Bioinform. 5: 8 (2004)
1990 – 1999
- 1997
- [c1]Cathal Seoighe, Denis C. Shields, Kenneth H. Wolfe:
Genome duplication and the evolution of gene Order and chromosome number in yeast. German Conference on Bioinformatics 1997: 61-63
Coauthor Index
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