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2020 – today
- 2022
[j12]Christopher E. Overton
, Lorenzo Pellis, Helena B. Stage, Francesca Scarabel, Joshua Burton, Christophe Fraser, Ian M. Hall, Thomas A. House, Chris P. Jewell, Anel Nurtay, Filippo Pagani, Katrina A. Lythgoe:
EpiBeds: Data informed modelling of the COVID-19 hospital burden in England. PLoS Comput. Biol. 18(9): 1010406 (2022)- 2021
- [j11]Matthew Abueg, Robert Hinch, Neo Wu, Luyang Liu, William J. M. Probert, Austin Wu, Paul Eastham, Yusef Shafi, Matt Rosencrantz, Michael Dikovsky, Zhao Cheng, Anel Nurtay, Lucie Abeler-Dörner, David G. Bonsall, Michael V. McConnell, Shawn O'Banion, Christophe Fraser:
Modeling the effect of exposure notification and non-pharmaceutical interventions on COVID-19 transmission in Washington state. npj Digit. Medicine 4 (2021) - [j10]Robert Hinch, William J. M. Probert, Anel Nurtay, Michelle Kendall, Chris Wymant, Matthew Hall, Katrina A. Lythgoe, Ana Bulas Cruz, Lele Zhao, Andrea Stewart, Luca Ferretti, Daniel Montero, James Warren, Nicole Mather, Matthew Abueg, Neo Wu, Olivier Legat, Katie Bentley, Thomas Mead, Kelvin Van-Vuuren, Dylan Feldner-Busztin, Tommaso Ristori, Anthony Finkelstein, David G. Bonsall, Lucie Abeler-Dörner, Christophe Fraser:
OpenABM-Covid19 - An agent-based model for non-pharmaceutical interventions against COVID-19 including contact tracing. PLoS Comput. Biol. 17(7) (2021) - [j9]Michael Pickles, Anne Cori, William J. M. Probert, Rafael Sauter, Robert Hinch, Sarah Fidler, Helen Ayles, Peter Bock, Deborah Donnell, Ethan Wilson, Estelle Piwowar-Manning, Sian Floyd, Richard J. Hayes, Christophe Fraser, HPTN 071 (PopART) Study Team:
PopART-IBM, a highly efficient stochastic individual-based simulation model of generalised HIV epidemics developed in the context of the HPTN 071 (PopART) trial. PLoS Comput. Biol. 17(9) (2021) - [i1]Vittoria Colizza, Eva Grill, Rafael T. Mikolajczyk, Ciro Cattuto, Adam J. Kucharski, Steven Riley, Michelle Kendall, Katrina A. Lythgoe, Lucie Abeler-Dörner, Chris Wymant, David G. Bonsall, Luca Ferretti, Christophe Fraser:
Epidemiological and public health requirements for COVID-19 contact tracing apps and their evaluation. CoRR abs/2102.05445 (2021)
2010 – 2019
- 2017
- [j8]Gytis Dudas, Luiz Max Carvalho, Trevor Bedford, Andrew J. Tatem, Guy Baele, Nuno R. Faria, Daniel J. Park, Jason T. Ladner, Armando Arias, Danny Asogun, Filip Bielejec, Sarah L. Caddy, Matthew Cotten, Jonathan D'Ambrozio, Simon Dellicour, Antonino Di Caro, Joseph W. Diclaro, Sophie Duraffour, Michael J. Elmore, Lawrence S. Fakoli, Ousmane Faye, Merle L. Gilbert, Sahr M. Gevao, Stephen Gire, Adrianne Gladden-Young, Andreas Gnirke, Augustine Goba, Donald S. Grant, Bart L. Haagmans, Julian A. Hiscox, Umaru Jah, Jeffrey R. Kugelman, Di Liu, Jia Lu, Christine M. Malboeuf, Suzanne Mate, David A. Matthews, Christian B. Matranga, Luke W. Meredith, James Qu, Joshua Quick, Suzan D. Pas, My V. T. Phan, Georgios Pollakis, Chantal B. Reusken, Mariano Sanchez-Lockhart, Stephen F. Schaffner, John S. Schieffelin, Rachel S. G. Sealfon, Etienne Simon-Loriere, Saskia L. Smits, Kilian Stoecker, Lucy Thorne, Ekaete Alice Tobin, Mohamed A. Vandi, Simon J. Watson, Kendra West, Shannon Whitmer, Michael R. Wiley, Sarah M. Winnicki, Shirlee Wohl, Roman Wölfel, Nathan L. Yozwiak, Kristian G. Andersen, Sylvia O. Blyden, Fatorma Bolay, Miles W. Carroll, Bernice Dahn, Boubacar Diallo, Pierre Formenty, Christophe Fraser, George F. Gao, Robert F. Garry, Ian Goodfellow, Stephan Günther, Christian T. Happi, Edward C. Holmes, Brima Kargbo, Sakoba Keïta, Paul Kellam, Marion Koopmans, Jens H. Kuhn, Nicholas J. Loman, N'Faly Magassouba, Dhamari Naidoo, Stuart T. Nichol, Tolbert Nyenswah, Gustavo F. Palacios, Oliver G. Pybus, Pardis C. Sabeti, Amadou Sall, Ute Ströher, Isatta Wurie, Marc A. Suchard, Philippe Lemey, Andrew Rambaut:
Virus genomes reveal factors that spread and sustained the Ebola epidemic. Nat. 544(7650): 309-315 (2017) - [j7]Hilje M. Doekes, Christophe Fraser, Katrina A. Lythgoe:
Effect of the Latent Reservoir on the Evolution of HIV at the Within- and Between-Host Levels. PLoS Comput. Biol. 13(1) (2017) - 2014
- [j6]Thibaut Jombart, Anne Cori, Xavier Didelot, Simon Cauchemez, Christophe Fraser, Neil M. Ferguson:
Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data. PLoS Comput. Biol. 10(1) (2014) - 2013
- [j5]Gkikas Magiorkinis, Vana Sypsa, Emmanouil Magiorkinis, Dimitrios Paraskevis, Antigoni Katsoulidou, Robert Belshaw, Christophe Fraser, Oliver George Pybus, Angelos Hatzakis:
Integrating Phylodynamics and Epidemiology to Estimate Transmission Diversity in Viral Epidemics. PLoS Comput. Biol. 9(1) (2013) - [j4]Katy Robinson, Nick Fyson, Ted Cohen, Christophe Fraser, Caroline Colijn:
How the Dynamics and Structure of Sexual Contact Networks Shape Pathogen Phylogenies. PLoS Comput. Biol. 9(6) (2013) - 2012
- [j3]Oliver Ratmann, Gé Donker, Adam Meijer, Christophe Fraser, Katia Koelle:
Phylodynamic Inference and Model Assessment with Approximate Bayesian Computation: Influenza as a Case Study. PLoS Comput. Biol. 8(12) (2012) - 2011
- [j2]George Shirreff, Lorenzo Pellis, Oliver Laeyendecker, Christophe Fraser:
Transmission Selects for HIV-1 Strains of Intermediate Virulence: A Modelling Approach. PLoS Comput. Biol. 7(10) (2011)
2000 – 2009
- 2009
- [j1]Jing Tang, William P. Hanage, Christophe Fraser, Jukka Corander:
Identifying Currents in the Gene Pool for Bacterial Populations Using an Integrative Approach. PLoS Comput. Biol. 5(8) (2009)
Coauthor Index
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