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2020 – today
- 2022
[i1]Fikret Aydin, Konstantia Georgouli, Gautham Dharuman, James N. Glosli, Felice C. Lightstone, Helgi I. Ingólfsson, Peer-Timo Bremer, Harsh Bhatia:
Identifying Orientation-specific Lipid-protein Fingerprints using Deep Learning. CoRR abs/2207.06630 (2022)- 2021
- [j5]Harsh Bhatia
, Timothy S. Carpenter, Helgi I. Ingólfsson, Gautham Dharuman, Piyush Karande, Shusen Liu, Tomas Oppelstrup, Chris Neale, Felice C. Lightstone, Brian Van Essen, James N. Glosli, Peer-Timo Bremer:
Machine-learning-based dynamic-importance sampling for adaptive multiscale simulations. Nat. Mach. Intell. 3(5): 401-409 (2021) - [c10]Harsh Bhatia, Francesco Di Natale, Joseph Y. Moon, Xiaohua Zhang, Joseph R. Chavez, Fikret Aydin, Christopher B. Stanley, Tomas Oppelstrup, Chris Neale, Sara Kokkila Schumacher, Dong H. Ahn, Stephen Herbein, Timothy S. Carpenter, Sandrasegaram Gnanakaran, Peer-Timo Bremer, James N. Glosli, Felice C. Lightstone, Helgi I. Ingólfsson:
Generalizable coordination of large multiscale workflows: challenges and learnings at scale. SC 2021: 10
2010 – 2019
- 2019
- [c9]Tapasya Patki, Zachary Frye, Harsh Bhatia, Francesco Di Natale, James N. Glosli, Helgi I. Ingólfsson, Barry Rountree:
Comparing GPU Power and Frequency Capping: A Case Study with the MuMMI Workflow. WORKS@SC 2019: 31-39 - [c8]Ian Karlin, Yoonho Park, Bronis R. de Supinski, Peng Wang, Bert Still, David Beckingsale, Robert Blake, Tong Chen, Guojing Cong, Carlos H. A. Costa, Johann Dahm, Giacomo Domeniconi, Thomas Epperly, Aaron Fisher, Sara Kokkila Schumacher, Steven H. Langer, Hai Le, Eun Kyung Lee, Naoya Maruyama, Xinyu Que, David F. Richards, Björn Sjögreen, Jonathan Wong, Carol S. Woodward, Ulrike Meier Yang, Xiaohua Zhang, Bob Anderson, David Appelhans, Levi Barnes, Peter D. Barnes Jr., Sorin Bastea, David Böhme, Jamie A. Bramwell, James M. Brase, José R. Brunheroto, Barry Chen, Charway R. Cooper, Tony Degroot, Robert D. Falgout, Todd Gamblin, David J. Gardner, James N. Glosli, John A. Gunnels, Max P. Katz, Tzanio V. Kolev, I-Feng W. Kuo, Matthew P. LeGendre, Ruipeng Li, Pei-Hung Lin, Shelby Lockhart, Kathleen McCandless, Claudia Misale, Jaime H. Moreno, Rob Neely, Jarom Nelson, Rao Nimmakayala, Kathryn M. O'Brien, Kevin O'Brien, Ramesh Pankajakshan, Roger Pearce, Slaven Peles, Phil Regier, Steven C. Rennich, Martin Schulz, Howard Scott, James C. Sexton, Kathleen Shoga, Shiv Sundram, Guillaume Thomas-Collignon, Brian Van Essen, Alexey Voronin, Bob Walkup, Lu Wang, Chris Ward, Hui-Fang Wen, Daniel A. White, Christopher Young, Cyril Zeller, Edward Zywicz:
Preparation and optimization of a diverse workload for a large-scale heterogeneous system. SC 2019: 32:1-32:17 - [c7]Francesco Di Natale, Harsh Bhatia, Timothy S. Carpenter, Chris Neale, Sara Kokkila Schumacher, Tomas Oppelstrup, Liam Stanton, Xiaohua Zhang, Shiv Sundram, Thomas R. W. Scogland, Gautham Dharuman, Michael P. Surh, Yue Yang, Claudia Misale, Lars Schneidenbach, Carlos H. A. Costa, Changhoan Kim, Bruce D'Amora, Sandrasegaram Gnanakaran, Dwight V. Nissley, Frederick H. Streitz, Felice C. Lightstone, Peer-Timo Bremer, James N. Glosli, Helgi I. Ingólfsson:
A massively parallel infrastructure for adaptive multiscale simulations: modeling RAS initiation pathway for cancer. SC 2019: 57:1-57:16 - 2016
- [c6]Ian Karlin, Tom Scogland, Arpith C. Jacob, Samuel F. Antão, Gheorghe-Teodor Bercea, Carlo Bertolli, Bronis R. de Supinski, Erik W. Draeger, Alexandre E. Eichenberger, Jim Glosli, Holger Jones, Adam Kunen, David Poliakoff, David F. Richards:
Early Experiences Porting Three Applications to OpenMP 4.5. IWOMP 2016: 281-292 - 2013
- [j4]Brian Carnes, Bor Chan, Erik W. Draeger, Jean-Luc Fattebert, Larry Fried, James N. Glosli, William D. Krauss, Steve H. Langer, Rose McCallen, Arthur A. Mirin, Fady Najjar, Albert L. Nichols, Tomas Oppelstrup, James A. Rathkopf, David F. Richards, Frederick H. Streitz, Pavlos Vranas, John Jeremy Rice, John A. Gunnels, Viatcheslav Gurev, Changhoan Kim, John Magerlein, Matthias Reumann, Hui-Fang Wen:
Science at LLNL with IBM Blue Gene/Q. IBM J. Res. Dev. 57(1/2): 11 (2013) - [j3]Manaschai Kunaseth, David F. Richards, James N. Glosli, Rajiv K. Kalia, Aiichiro Nakano, Priya Vashishta:
Analysis of scalable data-privatization threading algorithms for hybrid MPI/OpenMP parallelization of molecular dynamics. J. Supercomput. 66(1): 406-430 (2013) - [c5]Manaschai Kunaseth, Rajiv K. Kalia, Aiichiro Nakano, Priya Vashishta, David F. Richards, James N. Glosli:
Performance Characteristics of Hardware Transactional Memory for Molecular Dynamics Application on BlueGene/Q: Toward Efficient Multithreading Strategies for Large-Scale Scientific Applications. IPDPS Workshops 2013: 1326-1335 - 2012
- [j2]Jean-Luc Fattebert, David F. Richards, James N. Glosli:
Dynamic load balancing algorithm for molecular dynamics based on Voronoi cells domain decompositions. Comput. Phys. Commun. 183(12): 2608-2615 (2012) - [c4]Arthur A. Mirin, David F. Richards, James N. Glosli, Erik W. Draeger, Bor Chan, Jean-Luc Fattebert, William D. Krauss, Tomas Oppelstrup, John Jeremy Rice, John A. Gunnels, Viatcheslav Gurev, Changhoan Kim, John Magerlein, Matthias Reumann, Hui-Fang Wen:
Toward real-time modeling of human heart ventricles at cellular resolution: simulation of drug-induced arrhythmias. SC 2012: 2
2000 – 2009
- 2009
- [c3]David F. Richards, James N. Glosli, Bor Chan, Milo R. Dorr, Erik W. Draeger, Jean-Luc Fattebert, William D. Krauss, Thomas E. Spelce, Frederick H. Streitz, Michael P. Surh, John A. Gunnels:
Beyond homogeneous decomposition: scaling long-range forces on Massively Parallel Systems. SC 2009 - 2008
- [j1]Bronis R. de Supinski, Martin Schulz, Vasily V. Bulatov, William H. Cabot, Bor Chan, Andrew W. Cook, Erik W. Draeger, James N. Glosli, Jeffrey A. Greenough, Keith W. Henderson, Alison Kubota, Steve Louis, Brian J. Miller, Mehul V. Patel, Thomas E. Spelce, Frederick H. Streitz, Peter L. Williams, Robert K. Yates, Andy Yoo, George Almási, Gyan Bhanot, Alan Gara, John A. Gunnels, Manish Gupta, José E. Moreira, James C. Sexton, Robert Walkup, Charles Archer, François Gygi, Timothy C. Germann, Kai Kadau, Peter S. Lomdahl, Charles A. Rendleman, Michael L. Welcome, William McLendon, Bruce Hendrickson, Franz Franchetti, Stefan Kral, Juergen Lorenz, Christoph W. Überhuber, Edmond Chow, Ümit V. Çatalyürek:
BlueGene/L applications: Parallelism On a Massive Scale. Int. J. High Perform. Comput. Appl. 22(1): 33-51 (2008) - 2007
- [c2]James N. Glosli, David F. Richards, K. J. Caspersen, R. E. Rudd, John A. Gunnels, Frederick H. Streitz:
Extending stability beyond CPU millennium: a micron-scale atomistic simulation of Kelvin-Helmholtz instability. SC 2007: 58 - 2005
- [c1]George Almási, Gyan Bhanot, Alan Gara, Manish Gupta, James C. Sexton, Robert Walkup, Vasily V. Bulatov, Andrew W. Cook, Bronis R. de Supinski, James N. Glosli, Jeffrey A. Greenough, François Gygi, Alison Kubota, Steve Louis, Thomas E. Spelce, Frederick H. Streitz, Peter L. Williams, Robert K. Yates, Charles Archer, José E. Moreira, Charles A. Rendleman:
Scaling physics and material science applications on a massively parallel Blue Gene/L system. ICS 2005: 246-252
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