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2010 – 2019
- 2015
[j9]Stephen Nayfach
, Patrick H. Bradley, Stacia K. Wyman, Timothy J. Laurent, Alexander G. Williams, Jonathan A. Eisen, Katherine S. Pollard, Thomas J. Sharpton:
Automated and Accurate Estimation of Gene Family Abundance from Shotgun Metagenomes. PLoS Comput. Biol. 11(11) (2015)- 2012
- [j8]Morgan G. I. Langille, Matthew R. Laird, William W. L. Hsiao, Terry A. Chiu, Jonathan A. Eisen, Fiona S. L. Brinkman:
MicrobeDB: a locally maintainable database of microbial genomic sequences. Bioinform. 28(14): 1947-1948 (2012) - [j7]Thomas J. Sharpton, Guillaume Jospin, Dongying Wu, Morgan G. I. Langille, Katherine S. Pollard, Jonathan A. Eisen:
Sifting through genomes with iterative-sequence clustering produces a large, phylogenetically diverse protein-family resource. BMC Bioinform. 13: 264 (2012) - [j6]Steven W. Kembel, Martin Wu, Jonathan A. Eisen, Jessica L. Green:
Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance. PLoS Comput. Biol. 8(10) (2012) - 2011
- [j5]Aaron E. Darling, Andrew J. Tritt, Jonathan A. Eisen, Marc T. Facciotti:
Mauve Assembly Metrics. Bioinform. 27(19): 2756-2757 (2011) - [j4]Thomas J. Sharpton, Samantha J. Riesenfeld, Steven W. Kembel, Joshua Ladau, James P. O'Dwyer, Jessica L. Green, Jonathan A. Eisen, Katherine S. Pollard:
PhylOTU: A High-Throughput Procedure Quantifies Microbial Community Diversity and Resolves Novel Taxa from Metagenomic Data. PLoS Comput. Biol. 7(1) (2011) - 2010
- [j3]Amber L. Hartman, Sean Riddle, Timothy M. McPhillips, Bertram Ludäscher, Jonathan A. Eisen:
WATERS: a Workflow for the Alignment, Taxonomy, and Ecology of Ribosomal Sequences. BMC Bioinform. 11: 317 (2010)
2000 – 2009
- 2008
- [c1]Sourav Chatterji, Ichitaro Yamazaki, Zhaojun Bai, Jonathan A. Eisen:
CompostBin: A DNA Composition-Based Algorithm for Binning Environmental Shotgun Reads. RECOMB 2008: 17-28 - 2007
- [b1]Nicholas H. Barton, Derek E. G. Briggs, Jonathan A. Eisen, David B. Goldstein, Nipam H. Patel:
Evolution. Cold Spring Harbor Laboratory Press 2007, ISBN 978-0-87969-684-9, pp. I-XIV, 1-833 - 2001
- [j2]Daniel H. Haft, Brendan J. Loftus, Delwood L. Richardson, Fan Yang, Jonathan A. Eisen, Ian T. Paulsen, Owen White:
TIGRFAMs: a protein family resource for the functional identification of proteins. Nucleic Acids Res. 29(1): 41-43 (2001)
1990 – 1999
- 1994
- [j1]Jonathan A. Eisen, Maria-Ines Benito, Virginia Walbot:
Sequence similarity of putative transposases links the maize Mutator autonomous element and a group of bacterial insertion sequences. Nucleic Acids Res. 22(13): 2634-2636 (1994)
Coauthor Index
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