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ORCIDRuud H. Brakenhoff
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2020 – today
- 2024
[j6]Liss Hernández
, Estefanía Estévez-Priego, Laura Lopez-Perez, María Fernanda Cabrera-Umpiérrez, María Teresa Arredondo, Giuseppe Fico, Tito Poli, Silvia Rossi, Elena Martinelli, Lisa Licitra, Stefano Cavalieri, Loris De Cecco, Silvana Canevari, Kathrin Scheckenbach, Ruud H. Brakenhoff, Irene Nauta, Frank J. P. Hoebers, Frederik W. R. Wesseling, Annalisa Trama, Gemma Gatta:
HeNeCOn: An ontology for integrative research in Head and Neck cancer. Int. J. Medical Informatics 181: 105284 (2024)
2010 – 2019
- 2019
- [j5]Jos B. Poell, Matias Mendeville, Daoud Sie, Arjen Brink, Ruud H. Brakenhoff, Bauke Ylstra:
ACE: absolute copy number estimation from low-coverage whole-genome sequencing data. Bioinform. 35(16): 2847-2849 (2019) - 2018
- [j4]Costa Bachas, Jasmina Hodzic, Johannes C. van der Mijn, Chantal Stoepker, Henk M. W. Verheul, Rob M. F. Wolthuis, Emanuela Felley-Bosco, Wessel N. van Wieringen, Victor W. van Beusechem, Ruud H. Brakenhoff, Renée X. de Menezes:
Rscreenorm: normalization of CRISPR and siRNA screen data for more reproducible hit selection. BMC Bioinform. 19(1): 301:1-301:12 (2018) - 2017
- [j3]Dennis E. te Beest, Steven W. Mes, Saskia M. Wilting, Ruud H. Brakenhoff, Mark A. van de Wiel:
Improved high-dimensional prediction with Random Forests by the use of co-data. BMC Bioinform. 18(1): 584:1-584:11 (2017) - [c2]Sultan Imangaliyev, Johannes H. Matse, Jan G. M. Bolscher, Ruud H. Brakenhoff, David T. W. Wong, Elisabeth Bloemena, Enno C. I. Veerman, Evgeni Levin:
Discovery of Salivary Gland Tumors' Biomarkers via Co-Regularized Sparse-Group Lasso. DS 2017: 298-305 - 2016
- [c1]Kathrin Scheckenbach, Lena Colter, Vera Okpanyi, Jörg Schipper, Thomas Klenzner, Stefan Wesarg, Florian Jung, Ruud H. Brakenhoff, Steven W. Mes, Marc van de Wiel, V. Karampali, A. Ruggeri, M. Cereda, Götz Lehnerdt, Jochen Windfuhr, Silke Gronau, Oramod Konsortium, Tito Poli:
Oramod - Software-basierte multimodale Prädiktion des Outcome von Patienten mit Mundhöhlenkarzinomen. CURAC 2016: 277-278 - 2014
- [j2]Viktorian Miok, Saskia M. Wilting, Mark A. van de Wiel, Annelieke Jaspers, Paula I. van Noort, Ruud H. Brakenhoff, Peter J. F. Snijders, Renske D. M. Steenbergen, Wessel N. van Wieringen:
tigaR: integrative significance analysis of temporal differential gene expression induced by genomic abnormalities. BMC Bioinform. 15: 327 (2014)
2000 – 2009
- 2005
- [j1]Mark A. van de Wiel, Serge J. Smeets, Ruud H. Brakenhoff, Bauke Ylstra:
CGHMultiArray: exact P-values for multi-array comparative genomic hybridization data. Bioinform. 21(14): 3193-3194 (2005)
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