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2020 – today
- 2024
[i1]Shang-Jung Wen, Jia-Ming Chang, Fang Yu:
scGHSOM: Hierarchical clustering and visualization of single-cell and CRISPR data using growing hierarchical SOM. CoRR abs/2407.16984 (2024)- 2023
- [j16]Cheng-Wei Ching
, Jia-Ming Chang, Jian-Jhih Kuo, Chih-Yu Wang:
Dual-Objective Personalized Federated Service System With Partially-Labeled Data Over Wireless Networks. IEEE Trans. Serv. Comput. 16(5): 3265-3279 (2023) - 2022
- [j15]Jia-Ming Chang, Yi-Fu Weng, Wei-Ting Chang, Fu-An Lin, Giacomo Cavalli:
HiCmapTools: a tool to access HiC contact maps. BMC Bioinform. 23(1): 64 (2022) - 2021
- [j14]Jia-Ming Chang, Evan W. Floden, Javier Herrero, Olivier Gascuel, Paolo Di Tommaso, Cédric Notredame:
Incorporating alignment uncertainty into Felsenstein's phylogenetic bootstrap to improve its reliability. Bioinform. 37(11): 1506-1514 (2021) - [j13]Jhen Yuan Yang, Jia-Ming Chang:
Pattern recognition of topologically associating domains using deep learning. BMC Bioinform. 22-S(10): 634 (2021) - [c7]Yu Ting Hsu, Jia-Ming Chang:
Stability of single-cell dimension reduction after data shuffling. ISPACS 2021: 1-2 - 2020
- [j12]Yi-Wei Liu, Tz-Wei Hsu, Che-Yu Chang, Wen-Hung Liao, Jia-Ming Chang:
GODoc: high-throughput protein function prediction using novel k-nearest-neighbor and voting algorithms. BMC Bioinform. 21-S(6): 276 (2020)
2010 – 2019
- 2019
- [c6]Yu-Ting Huang, Meng-Shin Shiao, Chen-An Tasi, Kuer-Yuan Lan, Chieh-Hsi Lin, Natini Jianawath, Jia-Ming Chang:
Identification of Alternative Splicing Characteristic Associated with Clear-Cell Ovarian Cancer from Paired Normal and Tumor Tissues. ICMLC 2019: 1-5 - [c5]Che-Yu Chang, Tz-Wei Hsu, Jia-Ming Chang:
PSLCNN: Protein Subcellular Localization Prediction for Eukaryotes and Prokaryotes Using Deep Learning. TAAI 2019: 1-5 - 2016
- [j11]Maria Chatzou, Cedrik Magis, Jia-Ming Chang, Carsten Kemena, Giovanni Bussotti, Ionas Erb, Cédric Notredame:
Multiple sequence alignment modeling: methods and applications. Briefings Bioinform. 17(6): 1009-1023 (2016) - [j10]Evan W. Floden, Paolo Di Tommaso, Maria Chatzou, Cedrik Magis, Cédric Notredame, Jia-Ming Chang:
PSI/TM-Coffee: a web server for fast and accurate multiple sequence alignments of regular and transmembrane proteins using homology extension on reduced databases. Nucleic Acids Res. 44(Webserver-Issue): W339-W343 (2016) - 2015
- [j9]Jia-Ming Chang, Paolo Di Tommaso, Vincent Lefort, Olivier Gascuel, Cédric Notredame:
TCS: a web server for multiple sequence alignment evaluation and phylogenetic reconstruction. Nucleic Acids Res. 43(Webserver-Issue): W3-W6 (2015) - 2012
- [j8]Emily Chia-Yu Su, Jia-Ming Chang, Cheng-Wei Cheng, Ting-Yi Sung, Wen-Lian Hsu:
Prediction of nuclear proteins using nuclear translocation signals proposed by probabilistic latent semantic indexing. BMC Bioinform. 13(S-17): S13 (2012) - [j7]Jia-Ming Chang, Paolo Di Tommaso, Jean-François Taly, Cédric Notredame:
Accurate multiple sequence alignment of transmembrane proteins with PSI-Coffee. BMC Bioinform. 13(S-4): S1 (2012) - 2011
- [j6]Paolo Di Tommaso, Sébastien Moretti, Ioannis Xenarios, Miquel Orobitg, Alberto Montanyola, Jia-Ming Chang, Jean-François Taly, Cédric Notredame:
T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension. Nucleic Acids Res. 39(Web-Server-Issue): 13-17 (2011)
2000 – 2009
- 2008
- [j5]Kuo-Liang Chung, Po-Hsuan Liao, Jia-Ming Chang:
Novel efficient two-pass algorithm for closed polygonal approximation based on LISE and curvature constraint criteria. J. Vis. Commun. Image Represent. 19(4): 219-230 (2008) - 2006
- [j4]Kuen-Pin Wu, Jia-Ming Chang, Jun-Bo Chen, Chi-Fon Chang, Wen-Jin Wu, Tai-Huang Huang, Ting-Yi Sung, Wen-Lian Hsu:
RIBRA - An Error-Tolerant Algorithm for the NMR Backbone Assignment Problem. J. Comput. Biol. 13(2): 229-244 (2006) - 2005
- [j3]Hsin-Nan Lin, Jia-Ming Chang, Kuen-Pin Wu, Ting-Yi Sung, Wen-Lian Hsu:
HYPROSP II-A knowledge-based hybrid method for protein secondary structure prediction based on local prediction confidence. Bioinform. 21(15): 3227-3233 (2005) - [c4]Hsin-Nan Lin, Kuen-Pin Wu, Jia-Ming Chang, Ting-Yi Sung, Wen-Lian Hsu:
GANAA Genetic Algorithm for NMR Backbone Resonance Assignment. CSB Workshops 2005: 218-219 - [c3]Kuen-Pin Wu, Jia-Ming Chang, Jun-Bo Chen, Chi-Fon Chang, Wen-Jin Wu, Tai-Huang Huang, Ting-Yi Sung, Wen-Lian Hsu:
RIBRA-An Error-Tolerant Algorithm for the NMR Backbone Assignment Problem. RECOMB 2005: 103-117 - 2004
- [c2]Wen-Lian Hsu, Jia-Ming Chang, Wen-Chi Chou, Jun-Bo Chen, Kuen-Pin Wu, Ting-Yi Sung, Chi-Fon Chang, Wen-Jin Wu, Tai-Huang Huang:
An Iterative Relaxation Technique for the NMR Backbone Assignment Problem. BIBE 2004: 89-92 - 2003
- [j2]Chuan Yi Tang, Chin Lung Lu, Margaret Dah-Tsyr Chang, Yin-Te Tsai, Yuh-Ju Sun, Kun-Mao Chao, Jia-Ming Chang, Yu-Han Chiou, Chia-Mao Wu, Hao-Teng Chang, Wei-I Chou:
Constrained Multiple Sequence Alignment Tool Development Andits Application to Rnase Family Alignment. J. Bioinform. Comput. Biol. 1(2): 267-288 (2003) - [j1]Rong-Jong Wai, Jia-Ming Chang:
Implementation of robust wavelet-neural-network sliding-mode control for induction servo motor drive. IEEE Trans. Ind. Electron. 50(6): 1317-1334 (2003) - 2002
- [c1]Chuan Yi Tang, Chin Lung Lu, Margaret Dah-Tsyr Chang, Yin-Te Tsai, Yuh-Ju Sun, Kun-Mao Chao, Jia-Ming Chang, Yu-Han Chiou, Chia-Mao Wu, Hao-Teng Chang, Wei-I Chou:
Constrained Multiple Sequence Alignment Tool Development and Its Application to RNase Family Alignment. CSB 2002: 127-137
Coauthor Index
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