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ORCIDSimona E. Rombo
Simona Ester Rombo
Person information
- affiliation: University of Palermo, Palermo, Italy
- affiliation (former): University of Calabria, Cosenza, Italy
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2020 – today
- 2024
[j26]Mariella Bonomo
, Simona E. Rombo:
Neighborhood based computational approaches for the prediction of lncRNA-disease associations. BMC Bioinform. 25(1): 187 (2024)- 2023
- [j25]Fabio Fassetti, Simona E. Rombo, Cristina Serrao:
Discriminative pattern discovery for the characterization of different network populations. Bioinform. 39(4) (2023) - [c38]Adam Przybylek, Aleksandra Karpus, Allel Hadjali, Anton Dignös, Carmem S. Hara, Danae Pla Karidi, Ester Zumpano, Fabio Persia, Genoveva Vargas-Solar, George Papastefanatos, Giancarlo Sperlì, Giorgos Giannopoulos, Ivan Lukovic, Julien Aligon, Manolis Terrovitis, Marek Grzegorowski, Mariella Bonomo, Mirian Halfeld Ferrari Alves, Nicolas Labroche, Paul Monsarrat, Richard Chbeir, Sana Sellami, Seshu Tirupathi, Simona E. Rombo, Slavica Kordic, Sonja Ristic, Tommaso Di Noia, Torben Bach Pedersen, Vincenzo Moscato:
Databases and Information Systems: Contributions from ADBIS 2023 Workshops and Doctoral Consortium. ADBIS (Short Papers) 2023: 293-311 - [c37]Mariella Bonomo, Simona E. Rombo, Filippo Rotolo:
Prediction of User-Brand Associations Based on Sentiment Analysis. EDBT/ICDT Workshops 2023 - [c36]Fabrizio Giuliano, Simona Ester Rombo, Mariella Bonomo, Salvatore Iiritano, Luigi Granata, Massimiliano Ruffolo, Ilenia Tinnirello:
Amarelli's Industry 4.0 Transformation with IoT and Digital Advertisement: Optimizing Operations and Engaging Customers. EDBT/ICDT Workshops 2023 - 2022
- [j24]Mariella Bonomo, Raffaele Giancarlo, Daniele Greco, Simona E. Rombo:
Topological ranks reveal functional knowledge encoded in biological networks: a comparative analysis. Briefings Bioinform. 23(3) (2022) - [j23]Lorenzo Di Rocco, Umberto Ferraro Petrillo, Simona E. Rombo:
DIAMIN: a software library for the distributed analysis of large-scale molecular interaction networks. BMC Bioinform. 23(1): 474 (2022) - [c35]Simone Contini, Simona E. Rombo:
A Collaborative Filtering Approach for Drug Repurposing. ADBIS (Short Papers) 2022: 381-387 - 2021
- [j22]Simona E. Rombo, Domenico Ursino:
Integrative bioinformatics and omics data source interoperability in the next-generation sequencing era - Editorial. Briefings Bioinform. 22(1): 1-2 (2021) - [i6]Ylenia Galluzzo, Raffaele Giancarlo, Mario Randazzo, Simona E. Rombo:
Burrows Wheeler Transform on a Large Scale: Algorithms Implemented in Apache Spark. CoRR abs/2107.03341 (2021) - 2020
- [c34]Mariella Bonomo, Armando La Placa, Simona E. Rombo:
Prediction of lncRNA-Disease Associations from Tripartite Graphs. Poly/DMAH@VLDB 2020: 205-210 - [c33]Mario Randazzo, Simona E. Rombo:
A Big Data Approach for Sequences Indexing on the Cloud via Burrows Wheeler Transform. AAI4H@ECAI 2020: 28-31 - [c32]Mariella Bonomo, Armando La Placa, Simona E. Rombo:
Identifying the k Best Targets for an Advertisement Campaign via Online Social Networks. KDIR 2020: 193-201 - [i5]Mario Randazzo, Simona E. Rombo:
A Big Data Approach for Sequences Indexing on the Cloud via Burrows Wheeler Transform. CoRR abs/2007.10095 (2020) - [i4]Mariella Bonomo, Armando La Placa, Simona E. Rombo:
Identifying the k Best Targets for an Advertisement Campaign via Online Social Networks. CoRR abs/2008.02108 (2020)
2010 – 2019
- 2019
- [j21]Fabio Fassetti, Claudia Giallombardo, Ofelia Leone, Luigi Palopoli, Simona E. Rombo, Adolfo Saiardi:
FEDRO: a software tool for the automatic discovery of candidate ORFs in plants with c →u RNA editing. BMC Bioinform. 20-S(4): 124:1-124:7 (2019) - [j20]Umberto Ferraro Petrillo, Mara Sorella, Giuseppe Cattaneo, Raffaele Giancarlo, Simona E. Rombo:
Analyzing big datasets of genomic sequences: fast and scalable collection of k-mer statistics. BMC Bioinform. 20-S(4): 138:1-138:14 (2019) - [j19]Raffaele Giancarlo, Simona E. Rombo, Filippo Utro:
DNA combinatorial messages and Epigenomics: The case of chromatin organization and nucleosome occupancy in eukaryotic genomes. Theor. Comput. Sci. 792: 117-130 (2019) - [c31]Mariella Bonomo, Gaspare Ciaccio, Andrea De Salve, Simona E. Rombo:
Customer recommendation based on profile matching and customized campaigns in on-line social networks. ASONAM 2019: 1155-1159 - [r3]Clara Pizzuti, Simona E. Rombo:
Algorithms for Graph and Network Analysis: Clustering and Search of Motifs in Graphs. Encyclopedia of Bioinformatics and Computational Biology (1) 2019: 95-101 - [r2]Luigi Palopoli, Simona E. Rombo:
Algorithms for Graph and Network Analysis: Graph Alignment. Encyclopedia of Bioinformatics and Computational Biology (1) 2019: 102-109 - [r1]Raffaele Giancarlo, Daniele Greco, Francesco Landolina, Simona E. Rombo:
Network Centralities and Node Ranking. Encyclopedia of Bioinformatics and Computational Biology (1) 2019: 950-957 - [i3]Mariella Bonomo, Gaspare Ciaccio, Andrea De Salve, Simona E. Rombo:
A Semantic Approach for User-Brand Targeting in On-Line Social Networks. CoRR abs/1907.01326 (2019) - 2018
- [j18]Raffaele Giancarlo, Simona E. Rombo, Filippo Utro:
In vitro versus in vivo compositional landscapes of histone sequence preferences in eucaryotic genomes. Bioinform. 34(20): 3454-3460 (2018) - [j17]Cinzia Pizzi, Mattia Ornamenti, Simone Spangaro, Simona E. Rombo, Laxmi Parida:
Efficient Algorithms for Sequence Analysis with Entropic Profiles. IEEE ACM Trans. Comput. Biol. Bioinform. 15(1): 117-128 (2018) - [c30]Udo Bub, Ajantha Dahanayake, Jérôme Darmont, Claudia Diamantini, Fabio Fassetti, Eduardo Fermé, Nadia Kabachi, Ilaria Matteucci, Bálint Molnár, Sham Navathe, Ermelinda Oro, Marinella Petrocchi, Simona E. Rombo, Massimo Ruffolo, Angelo Spognardi, Bernhard Thalheim, Domenico Ursino:
Contributions from ADBIS 2018 Workshops. ADBIS (Short Papers and Workshops) 2018: 91-102 - [c29]Claudia Giallombardo, Salvatore Morfea, Simona E. Rombo:
An Integrative Framework for the Construction of Big Functional Networks. BIBM 2018: 2088-2093 - [c28]Angelo Furfaro, Simona E. Rombo:
Efficient Classification of Digital Images based on Pattern-features. PhyCS 2018: 93-99 - [i2]Umberto Ferraro Petrillo, Mara Sorella, Giuseppe Cattaneo, Raffaele Giancarlo, Simona E. Rombo:
Analyzing Big Datasets of Genomic Sequences: Fast and Scalable Collection of k-mer Statistics. CoRR abs/1807.01566 (2018) - 2017
- [b1]Fabio Fassetti, Simona E. Rombo, Cristina Serrao:
Discriminative Pattern Discovery on Biological Networks. Springer Briefs in Computer Science, Springer 2017, ISBN 978-3-319-63476-0, pp. 3-45 - [j16]Angelo Furfaro, Maria Carmela Groccia, Simona E. Rombo:
2D Motif Basis Applied to the Classification of Digital Images. Comput. J. 60(7): 1096-1109 (2017) - [j15]Simona E. Rombo, Filippo Utro:
Foreword: Algorithms, Strings and Theoretical Approaches in the Big Data Era - Special Issue in Honor of the 60th Birthday of Professor Raffaele Giancarlo. Theor. Comput. Sci. 698: 1-3 (2017) - [i1]Fabio Fassetti, Claudia Giallombardo, Ofelia Leone, Luigi Palopoli, Simona E. Rombo, Pierluigi Ruffolo, Adolfo Saiardi:
Automatic simulation of RNA editing in plants for the identification of novel putative Open Reading Frames. PeerJ Prepr. 5: e3362 (2017) - 2016
- [c27]Fabio Fassetti, Claudia Giallombardo, Ofelia Leone, Luigi Palopoli, Simona E. Rombo, Adolfo Saiardi:
Discovering New Proteins in Plant Mitochondria by RNA Editing Simulation. BIOINFORMATICS 2016: 182-189 - [c26]Fabio Fassetti, Simona E. Rombo, Cristina Serrao:
Discovering discriminative graph patterns from gene expression data. SAC 2016: 23-30 - 2015
- [j14]Simona Panni, Simona E. Rombo:
Searching for repetitions in biological networks: methods, resources and tools. Briefings Bioinform. 16(1): 118-136 (2015) - [j13]Raffaele Giancarlo, Simona E. Rombo, Filippo Utro:
Epigenomic k-mer dictionaries: shedding light on how sequence composition influences in vivo nucleosome positioning. Bioinform. 31(18): 2939-2946 (2015) - 2014
- [j12]Raffaele Giancarlo, Simona E. Rombo, Filippo Utro:
Compressive biological sequence analysis and archival in the era of high-throughput sequencing technologies. Briefings Bioinform. 15(3): 390-406 (2014) - [j11]Clara Pizzuti, Simona E. Rombo:
Algorithms and tools for protein-protein interaction networks clustering, with a special focus on population-based stochastic methods. Bioinform. 30(10): 1343-1352 (2014) - [j10]Clara Pizzuti, Simona E. Rombo:
An evolutionary restricted neighborhood search clustering approach for PPI networks. Neurocomputing 145: 53-61 (2014) - [j9]Laxmi Parida, Cinzia Pizzi, Simona E. Rombo:
Irredundant tandem motifs. Theor. Comput. Sci. 525: 89-102 (2014) - [c25]Laxmi Parida, Cinzia Pizzi, Simona E. Rombo:
Entropic Profiles, Maximal Motifs and the Discovery of Significant Repetitions in Genomic Sequences. WABI 2014: 148-160 - 2013
- [c24]Angelo Furfaro, Maria Carmela Groccia, Simona E. Rombo:
Image Classification Based on 2D Feature Motifs. FQAS 2013: 340-351 - [c23]Clara Pizzuti, Simona E. Rombo:
Restricted Neighborhood Search Clustering Revisited: An Evolutionary Computation Perspective. PRIB 2013: 59-68 - 2012
- [j8]Clara Pizzuti, Simona E. Rombo:
A Coclustering Approach for Mining Large Protein-Protein Interaction Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 9(3): 717-730 (2012) - [j7]Simona E. Rombo:
Extracting string motif bases for quorum higher than two. Theor. Comput. Sci. 460: 94-103 (2012) - [c22]Clara Pizzuti, Simona E. Rombo, Elena Marchiori:
Complex Detection in Protein-Protein Interaction Networks: A Compact Overview for Researchers and Practitioners. EvoBIO 2012: 211-223 - [c21]Clara Pizzuti, Simona E. Rombo:
Experimental evaluation of topological-based fitness functions to detect complexes in PPI networks. GECCO 2012: 193-200 - [c20]Roberto De Virgilio, Simona E. Rombo:
Approximate matching over biological RDF graphs. SAC 2012: 1413-1414 - [c19]Laxmi Parida, Cinzia Pizzi, Simona E. Rombo:
Characterization and Extraction of Irredundant Tandem Motifs. SPIRE 2012: 385-397 - 2011
- [j6]Nicola Ferraro, Luigi Palopoli, Simona Panni, Simona E. Rombo:
Asymmetric Comparison and Querying of Biological Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 8(4): 876-889 (2011) - [c18]Alessia Amelio, Alberto Apostolico, Simona E. Rombo:
Image Compression by 2D Motif Basis. DCC 2011: 153-162 - 2010
- [j5]Francesco Bruno, Luigi Palopoli, Simona E. Rombo:
New Trends in Graph Mining: Structural and Node-Colored Network Motifs. Int. J. Knowl. Discov. Bioinform. 1(1): 81-99 (2010) - [c17]Fabio Fassetti, Ofelia Leone, Luigi Palopoli, Simona E. Rombo, Adolfo Saiardi:
IP6K Gene Discovery in Plant mtDNA. CIBB 2010: 59-71 - [c16]Nicola Ferraro, Luigi Palopoli, Simona Panni, Simona E. Rombo:
"Master-Slave" Biological Network Alignment. ISBRA 2010: 215-229 - [c15]Nicola Ferraro, Luigi Palopoli, Simona Panni, Simona E. Rombo:
Asymmetric Global Alignment of Protein-Protein Interaction Graph Databases (Extended Abstract). SEBD 2010: 334-341
2000 – 2009
- 2009
- [j4]Valeria Fionda, Luigi Palopoli, Simona Panni, Simona E. Rombo:
A technique to search for functional similarities in protein-protein interaction networks. Int. J. Data Min. Bioinform. 3(4): 431-453 (2009) - [j3]Luigi Palopoli, Simona E. Rombo, Giorgio Terracina, Giuseppe Tradigo, Pierangelo Veltri:
Improving protein secondary structure predictions by prediction fusion. Inf. Fusion 10(3): 217-232 (2009) - [j2]Simona E. Rombo:
Optimal extraction of motif patterns in 2D. Inf. Process. Lett. 109(17): 1015-1020 (2009) - [c14]Luca Miceli, Luigi Palopoli, Simona E. Rombo, Giorgio Terracina, Giuseppe Tradigo, Pierangelo Veltri:
Experimental Evaluation of Protein Secondary Structure Predictors. ICCS (1) 2009: 848-857 - [c13]Valeria Fionda, Luigi Palopoli, Simona Panni, Simona E. Rombo:
Extracting similar sub-graphs across PPI networks. ISCIS 2009: 183-188 - [p1]Erika De Francesco, Giuliana Di Santo, Luigi Palopoli, Simona E. Rombo:
A Summary of Genomic Databases: Overview and Discussion. Biomedical Data and Applications 2009: 37-54 - 2008
- [j1]Alberto Apostolico, Laxmi Parida, Simona E. Rombo:
Motif patterns in 2D. Theor. Comput. Sci. 390(1): 40-55 (2008) - [c12]Clara Pizzuti, Simona E. Rombo:
Multi-functional Protein Clustering in PPI Networks . BIRD 2008: 318-330 - [c11]Valeria Fionda, Luigi Palopoli, Simona Panni, Simona E. Rombo:
Protein-Protein Interaction Network Querying by a "Focus and Zoom" Approach. BIRD 2008: 331-346 - [c10]Valeria Fionda, Luigi Palopoli, Simona Panni, Simona E. Rombo:
Singling out functional similarities in graph databases. SEBD 2008: 271-278 - [c9]Clara Pizzuti, Simona E. Rombo:
Discovering meaningful protein-protein interaction modules by a co-clustering based approach. SEBD 2008: 294-301 - 2007
- [c8]Valeria Fionda, Luigi Palopoli, Simona Panni, Simona E. Rombo:
GRAPPIN: Bipartite GRAph Based Protein-Protein Interaction Network Similarity Search. BIBM 2007: 355-361 - [c7]Fabrizio Angiulli, Valeria Fionda, Simona E. Rombo:
Protein Data Condensation for Effective Quaternary Structure Classification. IDEAL 2007: 810-820 - [c6]Clara Pizzuti, Simona E. Rombo:
PINCoC : A Co-clustering Based Approach to Analyze Protein-Protein Interaction Networks. IDEAL 2007: 821-830 - 2006
- [c5]Luigi Palopoli, Simona E. Rombo, Giorgio Terracina, Giuseppe Tradigo, Pierangelo Veltri:
JSSPrediction: a Framework to Predict Protein Secondary Structures Using Integration. CBMS 2006: 931-935 - 2005
- [c4]Luigi Palopoli, Simona E. Rombo, Giorgio Terracina:
Flexible Pattern Discovery with (Extended) Disjunctive Logic Programming. ISMIS 2005: 504-513 - 2004
- [c3]Simona E. Rombo, Giorgio Terracina:
Discovering Representative Models in Large Time Series Databases. FQAS 2004: 84-97 - [c2]Pasquale Grimaldi, Simona E. Rombo, Giorgio Terracina, Luigi Palopoli:
Derivazione efficiente di pattern strutturati frequenti da database di natura biologica. SEBD 2004: 106-117 - [c1]Francesco Buccafurri, Gianluca Lax, Simona E. Rombo:
Riduzione del traffico nei sistemi P2P: un approccio semantico. SEBD 2004: 370-381
Coauthor Index
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last updated on 2024-10-07 21:25 CEST by the dblp team
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