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2020 – today
- 2021
[j12]Andrea Raffo
, Ulderico Fugacci, Silvia Biasotti, Walter Rocchia, Yonghuai Liu, Ekpo Otu, Reyer Zwiggelaar, David Hunter, Evangelia I. Zacharaki, Eleftheria Psatha, Dimitrios Laskos, Gerasimos Arvanitis, Konstantinos Moustakas, Tunde Aderinwale, Charles Christoffer, Woong-Hee Shin, Daisuke Kihara, Andrea Giachetti, Huu-Nghia Nguyen, Tuan-Duy Nguyen, Vinh-Thuyen Nguyen-Truong, Danh Le-Thanh, Hai-Dang Nguyen, Minh-Triet Tran:
SHREC 2021: Retrieval and classification of protein surfaces equipped with physical and chemical properties. Comput. Graph. 99: 1-21 (2021)- [c1]Florent Langenfeld, Tunde Aderinwale, Charles Christoffer, Woong-Hee Shin, Genki Terashi, Xiao Wang, Daisuke Kihara, Halim Benhabiles, Karim Hammoudi, Adnane Cabani, Féryal Windal, Mahmoud Melkemi, Ekpo Otu, Reyer Zwiggelaar, David Hunter, Yonghuai Liu, Léa Sirugue, Huu-Nghia H. Nguyen, Tuan-Duy H. Nguyen, Vinh-Thuyen Nguyen-Truong, Danh Le, Hai-Dang Nguyen, Minh-Triet Tran, Matthieu Montès:
SHREC 2021: Surface-based Protein Domains Retrieval. 3DOR 2021: 19-26
2010 – 2019
- 2019
- [j11]Woong-Hee Shin, Daisuke Kihara:
Predicting binding poses and affinity ranking in D3R Grand Challenge using PL-PatchSurfer2.0. J. Comput. Aided Mol. Des. 33(12): 1083-1094 (2019) - [j10]Atilla Sit, Woong-Hee Shin, Daisuke Kihara:
Three-dimensional Krawtchouk descriptors for protein local surface shape comparison. Pattern Recognit. 93: 534-545 (2019) - [r1]Xusi Han, Woong-Hee Shin, Charles Christoffer, Genki Terashi, Lyman Monroe, Daisuke Kihara:
Study of the Variability of the Native Protein Structure. Encyclopedia of Bioinformatics and Computational Biology (3) 2019: 606-619 - 2018
- [j9]Lenna X. Peterson, Yoichiro Togawa, Juan Esquivel-Rodríguez, Genki Terashi, Charles Christoffer, Amitava Roy, Woong-Hee Shin, Daisuke Kihara:
Modeling the assembly order of multimeric heteroprotein complexes. PLoS Comput. Biol. 14(1) (2018) - 2017
- [j8]Minkyung Baek, Woong-Hee Shin, Hwan Won Chung, Chaok Seok:
GalaxyDock BP2 score: a hybrid scoring function for accurate protein-ligand docking. J. Comput. Aided Mol. Des. 31(7): 653-666 (2017) - 2016
- [j7]Woong-Hee Shin, Gyu Rie Lee, Chaok Seok:
Evaluation of GalaxyDock Based on the Community Structure-Activity Resource 2013 and 2014 Benchmark Studies. J. Chem. Inf. Model. 56(6): 988-995 (2016) - [j6]Xiaolei Zhu, Woong-Hee Shin, Hyungrae Kim, Daisuke Kihara:
Combined Approach of Patch-Surfer and PL-PatchSurfer for Protein-Ligand Binding Prediction in CSAR 2013 and 2014. J. Chem. Inf. Model. 56(6): 1088-1099 (2016) - [j5]Woong-Hee Shin, Charles Christoffer, Ji-Bo Wang, Daisuke Kihara:
PL-PatchSurfer2: Improved Local Surface Matching-Based Virtual Screening Method That Is Tolerant to Target and Ligand Structure Variation. J. Chem. Inf. Model. 56(9): 1676-1691 (2016) - 2014
- [j4]Lim Heo, Woong-Hee Shin, Myeong Sup Lee, Chaok Seok:
GalaxySite: ligand-binding-site prediction by using molecular docking. Nucleic Acids Res. 42(Webserver-Issue): 210-214 (2014) - 2013
- [j3]Woong-Hee Shin, Jae-Kwan Kim, Deok-Soo Kim, Chaok Seok:
GalaxyDock2: Protein-ligand docking using beta-complex and global optimization. J. Comput. Chem. 34(30): 2647-2656 (2013) - 2012
- [j2]Woong-Hee Shin, Chaok Seok:
GalaxyDock: Protein-Ligand Docking with Flexible Protein Side-chains. J. Chem. Inf. Model. 52(12): 3225-3232 (2012) - 2011
- [j1]Woong-Hee Shin, Lim Heo, Juyong Lee, Junsu Ko, Chaok Seok, Jooyoung Lee:
LigDockCSA: Protein-ligand docking using conformational space annealing. J. Comput. Chem. 32(15): 3226-3232 (2011)
Coauthor Index
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