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Anand A. Joshi
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2020 – today
- 2024
- [c58]Haleh Akrami, Omar Zamzam, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy:
Beta Quantile Regression for Robust Estimation of Uncertainty in the Presence of Outliers. ICASSP 2024: 7480-7484 - [c57]Wenhui Cui, Woojae Jeong, Philipp Thölke, Takfarinas Medani, Karim Jerbi, Anand A. Joshi, Richard M. Leahy:
Neuro-GPT: Towards A Foundation Model For EEG. ISBI 2024: 1-5 - 2023
- [j19]Takfarinas Medani, Juan Garcia-Prieto, François Tadel, Marios Antonakakis, Tim Erdbrügger, Malte Hoeltershinken, Wayne Mead, Sophie Schrader, Anand A. Joshi, Christian Engwer, Carsten H. Wolters, John C. Mosher, Richard M. Leahy:
Brainstorm-DUNEuro: An integrated and user-friendly Finite Element Method for modeling electromagnetic brain activity. NeuroImage 267: 119851 (2023) - [c56]Yixue Feng, Bramsh Qamar Chandio, Julio E. Villalon-Reina, Sophia I. Thomopoulos, Himanshu Joshi, Gauthami Nair, Anand A. Joshi, Ganesan Venkatasubramanian, John P. John, Paul M. Thompson:
BundleCleaner: Unsupervised Denoising and Subsampling of Diffusion MRI-Derived Tractography Data. CDMRI@MICCAI 2023: 152-164 - [i13]Haleh Akrami, Omar Zamzam, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy:
Beta quantile regression for robust estimation of uncertainty in the presence of outliers. CoRR abs/2309.07374 (2023) - [i12]Wenhui Cui, Woojae Jeong, Philipp Thölke, Takfarinas Medani, Karim Jerbi, Anand A. Joshi, Richard M. Leahy:
Neuro-GPT: Developing A Foundation Model for EEG. CoRR abs/2311.03764 (2023) - [i11]Wenhui Cui, Haleh Akrami, Ganning Zhao, Anand A. Joshi, Richard M. Leahy:
Meta Transfer of Self-Supervised Knowledge: Foundation Model in Action for Post-Traumatic Epilepsy Prediction. CoRR abs/2312.14204 (2023) - 2022
- [j18]Haleh Akrami, Anand A. Joshi, Jian Li, Sergül Aydöre, Richard M. Leahy:
A robust variational autoencoder using beta divergence. Knowl. Based Syst. 238: 107886 (2022) - [c55]Jianan Cui, Yutong Xie, Anand A. Joshi, Kuang Gong, Kyung Sang Kim, Young-Don Son, Jong Hoon Kim, Richard M. Leahy, Huafeng Liu, Quanzheng Li:
PET Denoising and Uncertainty Estimation Based on NVAE Model Using Quantile Regression Loss. MICCAI (4) 2022: 173-183 - [i10]Wenhui Cui, Haleh Akrami, Anand A. Joshi, Richard M. Leahy:
Semi-supervised Learning using Robust Loss. CoRR abs/2203.01524 (2022) - [i9]Haleh Akrami, Wenhui Cui, Anand A. Joshi, Richard M. Leahy:
Learning from imperfect training data using a robust loss function: application to brain image segmentation. CoRR abs/2208.04941 (2022) - [i8]Hedong Zhang, Anand A. Joshi:
Semi-supervised Learning with Robust Loss in Brain Segmentation. CoRR abs/2212.03082 (2022) - [i7]Wenhui Cui, Haleh Akrami, Anand A. Joshi, Richard M. Leahy:
Toward Improved Generalization: Meta Transfer of Self-supervised Knowledge on Graphs. CoRR abs/2212.08217 (2022) - 2021
- [j17]Jian Li, Jessica L. Wisnowski, Anand A. Joshi, Richard M. Leahy:
Robust brain network identification from multi-subject asynchronous fMRI data. NeuroImage 227: 117615 (2021) - [c54]Haleh Akrami, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy:
Quantile Regression for Uncertainty Estimation in VAEs with Applications to Brain Lesion Detection. IPMI 2021: 689-700 - [c53]Haleh Akrami, Andrei Irimia, Wenhui Cui, Anand A. Joshi, Richard M. Leahy:
Prediction of posttraumatic epilepsy using machine learning. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging 2021 - [c52]Anand A. Joshi, Soyoung Choi, Jian Li, Haleh Akrami, Richard M. Leahy:
A pairwise approach for fMRI group studies using the BrainSync Transform. Medical Imaging: Image Processing 2021 - [c51]Shashank N. Sridhara, Haleh Akrami, Vaishnavi Krishnamurthy, Anand A. Joshi:
Bias field correction in 3D-MRIs using convolutional autoencoders. Medical Imaging: Image Processing 2021 - [i6]Haleh Akrami, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy:
Deep Quantile Regression for Uncertainty Estimation in Unsupervised and Supervised Lesion Detection. CoRR abs/2109.09374 (2021) - 2020
- [j16]Jian Li, Soyoung Choi, Anand A. Joshi, Jessica L. Wisnowski, Richard M. Leahy:
Temporal non-local means filtering for studies of intrinsic brain connectivity from individual resting fMRI. Medical Image Anal. 61: 101635 (2020) - [c50]Jian Li, Anand A. Joshi, Richard M. Leahy:
A Network-Based Approach to Study of Adhd Using Tensor Decomposition of Resting State Fmri Data. ISBI 2020: 1-5 - [c49]Haleh Akrami, Anand A. Joshi, Jian Li, Sergül Aydöre, Richard M. Leahy:
Brain Lesion Detection Using A Robust Variational Autoencoder and Transfer Learning. ISBI 2020: 786-790 - [i5]Haleh Akrami, Sergül Aydöre, Richard M. Leahy, Anand A. Joshi:
Robust Variational Autoencoder for Tabular Data with Beta Divergence. CoRR abs/2006.08204 (2020) - [i4]Haleh Akrami, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy:
Addressing Variance Shrinkage in Variational Autoencoders using Quantile Regression. CoRR abs/2010.09042 (2020) - [i3]Takfarinas Medani, Juan Garcia-Prieto, François Tadel, Sophie Schrader, Anand A. Joshi, Christian Engwer, Carsten H. Wolters, John C. Mosher, Richard M. Leahy:
Realistic head modeling of electromagnetic brain activity: An integrated Brainstorm pipeline from MRI data to the FEM solution. CoRR abs/2011.01292 (2020) - [i2]Anand A. Joshi, Soyoung Choi, Haleh Akrami, Richard M. Leahy:
fMRI-Kernel Regression: A Kernel-based Method for Pointwise Statistical Analysis of rs-fMRI for Population Studies. CoRR abs/2012.06972 (2020)
2010 – 2019
- 2019
- [c48]Anand A. Joshi, Haleh Akrami, Jian Li, Richard M. Leahy:
A Matched Filter Decomposition of fMRI into Resting and Task Components. MICCAI (3) 2019: 673-681 - [c47]Jian Li, Jessica L. Wisnowski, Anand A. Joshi, Richard M. Leahy:
Brain network identification in asynchronous task fMRI data using robust and scalable tensor decomposition. Medical Imaging: Image Processing 2019: 109490N - [c46]Haleh Akrami, Anand A. Joshi, Jian Li, Richard M. Leahy:
Group-wise alignment of resting fMRI in space and time. Medical Imaging: Image Processing 2019: 109492W - [c45]Anand A. Joshi, Jian Li, Haleh Akrami, Richard M. Leahy:
Predicting cognitive scores from resting fMRI data and geometric features of the brain. Medical Imaging: Image Processing 2019: 109492E - [i1]Haleh Akrami, Anand A. Joshi, Jian Li, Richard M. Leahy:
Robust Variational Autoencoder. CoRR abs/1905.09961 (2019) - 2018
- [j15]Brent Foster, Anand A. Joshi, Marissa Borgese, Yasser Abdelhafez, Robert D. Boutin, Abhijit J. Chaudhari:
WRIST: A WRist Image Segmentation Toolkit for carpal bone delineation from MRI. Comput. Medical Imaging Graph. 63: 31-40 (2018) - [j14]Anand A. Joshi, Minqi Chong, Jian Li, Soyoung Choi, Richard M. Leahy:
Are you thinking what I'm thinking? Synchronization of resting fMRI time-series across subjects. NeuroImage 172: 740-752 (2018) - [c44]Jian Li, Soyoung Choi, Anand A. Joshi, Jessica L. Wisnowski, Richard M. Leahy:
Global PDF-based temporal non-local means filtering reveals individual differences in brain connectivity. ISBI 2018: 15-19 - [c43]Anand A. Joshi, Jian Li, Minqi Chong, Haleh Akrami, Richard M. Leahy:
rfDemons: Resting fMRI-Based Cortical Surface Registration Using the BrainSync Transform. MICCAI (3) 2018: 198-205 - [c42]Anand A. Joshi, Chitresh Bhushan, Ronald Salloum, Jessica L. Wisnowski, David W. Shattuck, Richard M. Leahy:
Using the Anisotropic Laplace Equation to Compute Cortical Thickness. MICCAI (3) 2018: 549-556 - 2017
- [j13]Minqi Chong, Chitresh Bhushan, Anand A. Joshi, Soyoung Choi, Justin P. Haldar, David W. Shattuck, R. Nathan Spreng, Richard M. Leahy:
Individual parcellation of resting fMRI with a group functional connectivity prior. NeuroImage 156: 87-100 (2017) - [c41]Suyash P. Awate, Richard M. Leahy, Anand A. Joshi:
Kernel Methods for Riemannian Analysis of Robust Descriptors of the Cerebral Cortex. IPMI 2017: 28-40 - [c40]Rosita Shishegar, Anand A. Joshi, Mary Tolcos, David W. Walker, Leigh A. Johnston:
Automatic segmentation of fetal brain using diffusion-weighted imaging cues. ISBI 2017: 804-807 - [c39]Anand A. Joshi, Minqi Chong, Richard M. Leahy:
BrainSync: An Orthogonal Transformation for Synchronization of fMRI Data Across Subjects. MICCAI (1) 2017: 486-494 - [c38]Anand A. Joshi, Soyoung Choi, Gaurav Sonkar, Minqi Chong, Jorge Gonzalez-Martinez, Dileep Nair, David W. Shattuck, Hanna Damasio, Richard M. Leahy:
A whole brain atlas with sub-parcellation of cortical gyri using resting fMRI. Medical Imaging: Image Processing 2017: 101330O - [c37]Gautham Rajagopal, Anand A. Joshi, Richard M. Leahy:
An algorithm for automatic parameter adjustment for brain extraction in BrainSuite. Medical Imaging: Image Processing 2017: 101330K - 2016
- [j12]Carl Lederman, Anand A. Joshi, Ivo D. Dinov, John Darrell Van Horn, Luminita A. Vese, Arthur W. Toga:
A Unified Variational Volume Registration Method Based on Automatically Learned Brain Structures. J. Math. Imaging Vis. 55(2): 179-198 (2016) - [j11]Anand A. Joshi, Richard M. Leahy, Ramsey Derek Badawi, Abhijit J. Chaudhari:
Registration-Based Morphometry for Shape Analysis of the Bones of the Human Wrist. IEEE Trans. Medical Imaging 35(2): 416-426 (2016) - [c36]Suyash P. Awate, Richard M. Leahy, Anand A. Joshi:
Riemannian Statistical Analysis of Cortical Geometry with Robustness to Partial Homology and Misalignment. MICCAI (1) 2016: 237-246 - 2015
- [j10]Chitresh Bhushan, Justin P. Haldar, Soyoung Choi, Anand A. Joshi, David W. Shattuck, Richard M. Leahy:
Co-registration and distortion correction of diffusion and anatomical images based on inverse contrast normalization. NeuroImage 115: 269-280 (2015) - [j9]Jie Shi, Olivier Collignon, Liang Xu, Gang Wang, Yue Kang, Franco Leporé, Yi Lao, Anand A. Joshi, Natasha Leporé, Yalin Wang:
Impact of Early and Late Visual Deprivation on the Structure of the Corpus Callosum: A Study Combining Thickness Profile with Surface Tensor-Based Morphometry. Neuroinformatics 13(3): 321-336 (2015) - [c35]Anand A. Joshi, Ronald Salloum, Chitresh Bhushan, Richard M. Leahy:
Measuring Asymmetric Interactions in Resting State Brain Networks. IPMI 2015: 399-410 - 2014
- [c34]Kristian M. Eschenburg, Julio Villalon-Reina, Neda Jahanshad, Talia M. Nir, Madelaine Daianu, Anand A. Joshi, Cassandra D. Leonardo, Stella de Bode, Susan Y. Bookheimer, Noriko Salamon, Paul M. Thompson:
Analysis of structural brain connectivity in 6 cases of hemispherectomy. ISBI 2014: 706-709 - [c33]Kenia Martínez, Anand A. Joshi, Sarah K. Madsen, Shantanu H. Joshi, Sherif Karama, Francisco J. Román, Julio Villalon-Reina, Miguel Burgaleta, Paul M. Thompson, Roberto Colom:
Reproducibility of brain-cognition relationships using different cortical surface-based analysis protocols. ISBI 2014: 1019-1022 - 2013
- [j8]Syed Ashrafulla, Justin P. Haldar, Anand A. Joshi, Richard M. Leahy:
Canonical granger causality between regions of interest. NeuroImage 83: 189-199 (2013) - [c32]Sergül Aydöre, Syed Ashrafulla, Anand A. Joshi, Richard M. Leahy:
A measure of connectivity in the presence of crosstalk. ACSSC 2013: 1848-1852 - [c31]Anand A. Joshi, Richard M. Leahy, Ramsey Derek Badawi, Abhijit J. Chaudhari:
Morphometry for early monitoring of treatment response in rheumatoid arthritis. ISBI 2013: 121-124 - [c30]Kenia Martínez, Julio Villalon-Reina, Dominique Kessel, Anand A. Joshi, José Angel Pineda-Pardo, Neda Jahanshad, Talia M. Nir, Kristian M. Eschenburg, Francisco J. Román, Miguel Burgaleta, Ana Beatriz Solana, M. Ángeles Quiroga, Roberto Colom, Paul M. Thompson:
Exploratory factor analysis of brain networks reveals sub-networks related to cognitive performance. ISBI 2013: 608-611 - 2012
- [j7]Shantanu H. Joshi, Ryan P. Cabeen, Anand A. Joshi, Bo Sun, Ivo D. Dinov, Katherine L. Narr, Arthur W. Toga, Roger P. Woods:
Diffeomorphic Sulcal Shape Analysis on the Cortex. IEEE Trans. Medical Imaging 31(6): 1195-1212 (2012) - [c29]Chitresh Bhushan, Justin P. Haldar, Anand A. Joshi, Richard M. Leahy:
Correcting susceptibility-induced distortion in diffusion-weighted MRI using constrained nonrigid registration. APSIPA 2012: 1-9 - [c28]Shantanu H. Joshi, Anand A. Joshi, Boris Gutman, Arthur W. Toga, Katie McMahon, Greig I. de Zubicaray, Nicholas G. Martin, Margaret J. Wright, Paul M. Thompson:
Genetic influences on sulcal patterns of the brain. ISBI 2012: 414-417 - [c27]Anand A. Joshi, David W. Shattuck, Hanna Damasio, Richard M. Leahy:
Geodesic curvature flow on surfaces for automatic sulcal delineation. ISBI 2012: 430-433 - [c26]David Wheland, Anand A. Joshi, Katie McMahon, Narelle K. Hansell, Nicholas G. Martin, Margaret J. Wright, Paul M. Thompson, David W. Shattuck, Richard M. Leahy:
Robust identification of partial-correlation based networks with applications to cortical thickness data. ISBI 2012: 1551-1554 - [c25]Syed Ashrafulla, Justin P. Haldar, Anand A. Joshi, Richard M. Leahy:
Canonical Granger causality applied to functional brain data. ISBI 2012: 1751-1754 - [c24]Anand A. Joshi, Syed Ashrafulla, David W. Shattuck, Hanna Damasio, Richard M. Leahy:
An Invariant Shape Representation Using the Anisotropic Helmholtz Equation. MICCAI (3) 2012: 607-614 - [c23]Anand A. Joshi, David W. Shattuck, Richard M. Leahy:
A Method for Automated Cortical Surface Registration and Labeling. WBIR 2012: 180-189 - [c22]Sangeetha Somayajula, Anand A. Joshi, Richard M. Leahy:
Non-rigid Image Registration Using Gaussian Mixture Models. WBIR 2012: 286-295 - 2011
- [j6]Carl Lederman, Anand A. Joshi, Ivo D. Dinov, Luminita A. Vese, Arthur W. Toga, John Darrell Van Horn:
The generation of tetrahedral mesh models for neuroanatomical MRI. NeuroImage 55(1): 153-164 (2011) - [j5]Moriah E. Thomason, Emily L. Dennis, Anand A. Joshi, Shantanu H. Joshi, Ivo D. Dinov, Catie Chang, Melissa L. Henry, Rebecca F. Johnson, Paul M. Thompson, Arthur W. Toga, Gary H. Glover, John D. Van Horn, Ian H. Gotlib:
Resting-state fMRI can reliably map neural networks in children. NeuroImage 55(1): 165-175 (2011) - [c21]Anand A. Joshi, Shantanu H. Joshi, Moriah E. Thomason, Ivo D. Dinov, Arthur W. Toga:
Evaluation of connectivity measures and anatomical features for statistical brain networks. ISBI 2011: 836-840 - [c20]Neda Jahanshad, Iman Aganj, Christophe Lenglet, Anand A. Joshi, Yan Jin, Marina Barysheva, Katie McMahon, Greig I. de Zubicaray, Nicholas G. Martin, Margaret J. Wright, Arthur W. Toga, Guillermo Sapiro, Paul M. Thompson:
Sex differences in the human connectome: 4-Tesla high angular resolution diffusion imaging (HARDI) tractography in 234 young adult twins. ISBI 2011: 939-943 - [c19]Julio Villalon, Anand A. Joshi, Natasha Leporé, Caroline C. Brun, Arthur W. Toga, Paul M. Thompson:
Comparison of volumetric registration algorithms for tensor-based morphometry. ISBI 2011: 1536-1541 - [c18]Gautam Prasad, Anand A. Joshi, Paul M. Thompson, Arthur W. Toga, David W. Shattuck, Demetri Terzopoulos:
Skull-stripping with deformable organisms. ISBI 2011: 1662-1665 - 2010
- [j4]Dimitrios Pantazis, Anand A. Joshi, Jintao Jiang, David W. Shattuck, Lynne E. Bernstein, Hanna Damasio, Richard M. Leahy:
Comparison of landmark-based and automatic methods for cortical surface registration. NeuroImage 49(3): 2479-2493 (2010) - [j3]Anand A. Joshi, Dimitrios Pantazis, Quanzheng Li, Hanna Damasio, David W. Shattuck, Arthur W. Toga, Richard M. Leahy:
Sulcal set optimization for cortical surface registration. NeuroImage 50(3): 950-959 (2010) - [c17]Shantanu H. Joshi, Ryan P. Cabeen, Anand A. Joshi, Roger P. Woods, Katherine L. Narr, Arthur W. Toga:
Diffeomorphic sulcal shape analysis for cortical surface registration. CVPR 2010: 475-482 - [c16]Anand A. Joshi, Natasha Leporé, Shantanu H. Joshi, Agatha D. Lee, Marina Barysheva, Greig I. de Zubicaray, Margaret J. Wright, Katie McMahon, Arthur W. Toga, Paul M. Thompson:
A genetic analysis of cortical thickness in 372 twins. ISBI 2010: 101-104 - [c15]Carl Lederman, Anand A. Joshi, Ivo D. Dinov, John D. Van Horn, Luminita A. Vese, Arthur W. Toga:
Tetrahedral mesh generation for medical images with multiple regions using active surfaces. ISBI 2010: 436-439 - [c14]Anand A. Joshi, Shantanu H. Joshi, Ivo D. Dinov, David W. Shattuck, Richard M. Leahy, Arthur W. Toga:
Anatomical structural network analysis of human brain using partial correlations of gray matter volumes. ISBI 2010: 844-847 - [c13]Shantanu H. Joshi, Ryan P. Cabeen, Bo Sun, Anand A. Joshi, Boris Gutman, Alen Zamanyan, Shruthi Chakrapani, Ivo D. Dinov, Roger P. Woods, Arthur W. Toga:
Cortical Sulcal Atlas Construction Using a Diffeomorphic Mapping Approach. MICCAI (1) 2010: 357-366 - [c12]Natasha Leporé, Anand A. Joshi, Richard M. Leahy, Caroline C. Brun, Yi-Yu Chou, Xavier Pennec, Agatha D. Lee, Marina Barysheva, Greig I. de Zubicaray, Margaret J. Wright, Katie L. McMahon, Arthur W. Toga, Paul M. Thompson:
A new combined surface and volume registration. Medical Imaging: Image Processing 2010: 76231E
2000 – 2009
- 2009
- [j2]Anand A. Joshi, David W. Shattuck, Paul M. Thompson, Richard M. Leahy:
A Parameterization-Based Numerical Method for Isotropic and Anisotropic Diffusion Smoothing on Non-Flat Surfaces. IEEE Trans. Image Process. 18(6): 1358-1365 (2009) - [c11]Anand A. Joshi, David W. Shattuck, Dimitrios Pantazis, Quanzheng Li, Hanna Damasio, Richard M. Leahy:
Optimization of landmark selection for cortical surface registration. CVPR 2009: 699-706 - [c10]Anand A. Joshi, Richard M. Leahy, Arthur W. Toga, David W. Shattuck:
A Framework for Brain Registration via Simultaneous Surface and Volume Flow. IPMI 2009: 576-588 - [c9]Anand A. Joshi, Abhijit J. Chaudhari, Changqing Li, David W. Shattuck, Joyita Dutta, Richard M. Leahy, Arthur W. Toga:
Posture Matching and Elastic Registration of a Mouse Atlas to Surface Topography Range Data. ISBI 2009: 366-369 - [c8]Joyita Dutta, Sangtae Ahn, Anand A. Joshi, Richard M. Leahy:
Optimal Illumination Patterns for Fluorescence Tomography. ISBI 2009: 1275-1278 - 2008
- [c7]Sangeetha Somayajula, Anand A. Joshi, Richard M. Leahy:
Mutual information based non-rigidmouse registration using a scale-space approach. ISBI 2008: 1147-1150 - 2007
- [j1]Anand A. Joshi, David W. Shattuck, Paul M. Thompson, Richard M. Leahy:
Surface-Constrained Volumetric Brain Registration Using Harmonic Mappings. IEEE Trans. Medical Imaging 26(12): 1657-1669 (2007) - [c6]Anand A. Joshi, David W. Shattuck, Paul M. Thompson, Richard M. Leahy:
Simultaneous surface and volumetric registration using harmonic maps. Computational Imaging 2007: 649816 - [c5]Anand A. Joshi, David W. Shattuck, Paul M. Thompson, Richard M. Leahy:
Brain Image Registration Using Cortically Constrained Harmonic Mappings. IPMI 2007: 359-371 - [c4]Anand A. Joshi, David W. Shattuck, Paul M. Thompson, Richard M. Leahy:
A Finite Element Method for Elastic Parameterization and Alignment of Cortical Surfaces Using Sulcal Constraints. ISBI 2007: 640-643 - [c3]Ilya Eckstein, Anand A. Joshi, C.-C. Jay Kuo, Richard M. Leahy, Mathieu Desbrun:
Generalized Surface Flows for Deformable Registration and Cortical Matching. MICCAI (1) 2007: 692-700 - 2005
- [c2]Anand A. Joshi, David W. Shattuck, Paul M. Thompson, Richard M. Leahy:
A Framework for Registration, Statistical Characterization and Classification of Cortically Constrained Functional Imaging Data. IPMI 2005: 186-196 - 2004
- [c1]Anand A. Joshi, Richard M. Leahy, Paul M. Thompson, David W. Shattuck:
Cortical Surface Parameterization by P-Harmonic Energy Minimization. ISBI 2004: 428-431
Coauthor Index
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