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2020 – today
- 2024
[j7]Tinghe Zhang
, Sumin Jo, Michelle Zhang, Kai Wang, Shou-Jiang Gao, Yufei Huang:
Understanding YTHDF2-mediated mRNA degradation by m6A-BERT-Deg. Briefings Bioinform. 25(3) (2024)- 2022
- [j6]Mario Flores, Zhentao Liu, Tinghe Zhang, Md Musaddaqui Hasib, Yu-Chiao Chiu, Zhenqing Ye, Karla Paniagua, Sumin Jo, Jianqiu Zhang, Shou-Jiang Gao, Yu-Fang Jin, Yidong Chen, Yufei Huang:
Deep learning tackles single-cell analysis - a survey of deep learning for scRNA-seq analysis. Briefings Bioinform. 23(1) (2022)
2010 – 2019
- 2019
- [j5]Song-Yao Zhang, Shaowu Zhang, Xiaonan Fan, Jia Meng, Yidong Chen, Shou-Jiang Gao, Yufei Huang:
Global analysis of N6-methyladenosine functions and its disease association using deep learning and network-based methods. PLoS Comput. Biol. 15(1) (2019) - 2018
- [j4]Hui Liu, Huaizhi Wang, Zhen Wei, Songyao Zhang, Gang Hua, Shao-Wu Zhang, Lin Zhang, Shou-Jiang Gao, Jia Meng, Xing Chen, Yufei Huang:
MeT-DB V2.0: elucidating context-specific functions of N6-methyl-adenosine methyltranscriptome. Nucleic Acids Res. 46(Database-Issue): D281-D287 (2018) - 2012
- [j3]Nguyen T. Nguyen, Ying Ann Chiao, Yufei Huang, Shou-Jiang Gao, Merry Lindsey, Yidong Chen, Yufang Jin:
Temporal clustering of gene expression patterns using short-time segments. Int. J. Funct. Informatics Pers. Medicine 4(1): 32-46 (2012) - 2011
- [c4]Dong Yue, Yidong Chen, Shou-Jiang Gao, Yufei Huang:
Computational prediction of microRNA regulatory pathways. GENSiPS 2011: 158-161 - 2010
- [j2]Hui Liu, Dong Yue, Yidong Chen, Shou-Jiang Gao, Yufei Huang:
Improving performance of mammalian microRNA target prediction. BMC Bioinform. 11: 476 (2010) - [c3]Nguyen T. Nguyen, Yufang Jin, Yufei Huang, Ying Ann Chiao, Shou-Jiang Gao, Merry Lindsey, Yidong Chen:
Temporal clustering of gene expression patterns using short-time segments. BIBM Workshops 2010: 173-178 - [c2]Dong Yue, Yidong Chen, Shou-Jiang Gao, Yufei Huang:
Computational prediction of MicroRNA regulatory pathways. BIBM Workshops 2010: 386-391
2000 – 2009
- 2009
- [j1]Jia Meng, Shou-Jiang Gao, Yufei Huang:
Enrichment constrained time-dependent clustering analysis for finding meaningful temporal transcription modules. Bioinform. 25(12): 1521-1527 (2009) - [c1]Hui Liu, Lin Zhang, Shou-Jiang Gao, Yufei Huang:
A Bayesian Approach for Identifying miRNA Targets by Combining Sequence Prediction and Expression Profiling. IJCBS 2009: 185-189
Coauthor Index
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