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Matthew B. Jones
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2020 – today
- 2024
- [j16]Steven S. Chong, Mark Schildhauer, Margaret O'Brien, Bryce D. Mecum, Matthew B. Jones:
Enhancing the FAIRness of Arctic Research Data Through Semantic Annotation. Data Sci. J. 23 (2024) - [j15]Wenwen Li, Chia-Yu Hsu, Sizhe Wang, Yezhou Yang, Hyunho Lee, Anna Liljedahl, Chandi Witharana, Yili Yang, Brendan M. Rogers, Samantha T. Arundel, Matthew B. Jones, Kenton McHenry, Patricia Solís:
Segment Anything Model Can Not Segment Anything: Assessing AI Foundation Model's Generalizability in Permafrost Mapping. Remote. Sens. 16(5): 797 (2024) - [i5]Wenwen Li, Chia-Yu Hsu, Sizhe Wang, Yezhou Yang, Hyunho Lee, Anna Liljedahl, Chandi Witharana, Yili Yang, Brendan M. Rogers, Samantha T. Arundel, Matthew B. Jones, Kenton McHenry, Patricia Solís:
Segment Anything Model Can Not Segment Anything: Assessing AI Foundation Model's Generalizability in Permafrost Mapping. CoRR abs/2401.08787 (2024) - 2021
- [c20]Timothy M. McPhillips, Thomas Thelen, Craig Willis, Kacper Kowalik, Matthew B. Jones, Bertram Ludäscher:
CPR-A Comprehensible Provenance Record for Verification Workflows in Whole Tale. IPAW 2021: 263-269 - 2020
- [j14]Elena Parmiggiani, Elizabeth Teracino, Marleen Huysman, Matthew B. Jones, Benjamin Mueller, Marius Mikalsen:
OASIS 2019 Panel Report: A Glimpse at the "Post-Digital". Commun. Assoc. Inf. Syst. 47: 29 (2020)
2010 – 2019
- 2019
- [j13]Mark A. Parsons, Ruth E. Duerr, Matthew B. Jones:
The History and Future of Data Citation in Practice. Data Sci. J. 18: 52 (2019) - [j12]Adam Brinckman, Kyle Chard, Niall Gaffney, Mihael Hategan, Matthew B. Jones, Kacper Kowalik, Sivakumar Kulasekaran, Bertram Ludäscher, Bryce D. Mecum, Jarek Nabrzyski, Victoria Stodden, Ian J. Taylor, Matthew J. Turk, Kandace Turner:
Computing environments for reproducibility: Capturing the "Whole Tale". Future Gener. Comput. Syst. 94: 854-867 (2019) - [c19]Kyle Chard, Thomas Thelen, Matthew J. Turk, Craig Willis, Niall Gaffney, Matthew B. Jones, Kacper Kowalik, Bertram Ludäscher, Timothy M. McPhillips, Jarek Nabrzyski, Victoria Stodden, Ian J. Taylor:
Application of BagIt-Serialized Research Object Bundles for Packaging and Re-Execution of Computational Analyses. eScience 2019: 514-521 - [c18]Kyle Chard, Niall Gaffney, Matthew B. Jones, Kacper Kowalik, Bertram Ludäscher, Jarek Nabrzyski, Victoria Stodden, Ian J. Taylor, Matthew J. Turk, Craig Willis:
Implementing Computational Reproducibility in the Whole Tale Environment. P-RECS@HPDC 2019: 17-22 - [i4]Daniel S. Katz, Daina Bouquin, Neil P. Chue Hong, Jessica Hausman, Catherine Mary Jones, Daniel Chivvis, Tim Clark, Mercè Crosas, Stephan Druskat, Martin Fenner, Tom Gillespie, Alejandra N. González-Beltrán, Morane Gruenpeter, Ted Habermann, Robert Haines, Melissa Harrison, Edwin A. Henneken, Lorraine J. Hwang, Matthew B. Jones, Alastair A. Kelly, David N. Kennedy, Katrin Leinweber, Fernando Rios, Carly Robinson, Ilian T. Todorov, Mingfang Wu, Qian Zhang:
Software Citation Implementation Challenges. CoRR abs/1905.08674 (2019) - 2018
- [c17]Bryce D. Mecum, Matthew B. Jones, David Vieglais, Craig Willis:
Preserving Reproducibility: Provenance and Executable Containers in DataONE Data Packages. eScience 2018: 45-49 - [i3]Adam Brinckman, Kyle Chard, Niall Gaffney, Mihael Hategan, Matthew B. Jones, Kacper Kowalik, Sivakumar Kulasekaran, Bertram Ludäscher, Bryce D. Mecum, Jarek Nabrzyski, Victoria Stodden, Ian J. Taylor, Matthew J. Turk, Kandace Turner:
Computing Environments for Reproducibility: Capturing the "Whole Tale". CoRR abs/1805.00400 (2018) - [i2]Martin Fenner, Daniella Lowenberg, Matthew B. Jones, Paul Needham, David Vieglais, Stephen Abrams, Patricia Cruse, John Chodacki:
Code of practice for research data usage metrics release 1. PeerJ Prepr. 6: e26505 (2018) - 2017
- [j11]Qian Zhang, Yang Cao, Qiwen Wang, Duc Vu, Priyaa Thavasimani, Timothy M. McPhillips, Paolo Missier, Peter Slaughter, Christopher Jones, Matthew B. Jones, Bertram Ludäscher:
Revealing the Detailed Lineage of Script Outputs Using Hybrid Provenance. Int. J. Digit. Curation 12(2): 390-408 (2017) - [j10]Kevin Carlberg, Matthew B. Jones, Harbir Antil:
Galerkin v. least-squares Petrov-Galerkin projection in nonlinear model reduction. J. Comput. Phys. 330: 693-734 (2017) - 2016
- [c16]Yang Cao, Christopher Jones, Víctor Cuevas-Vicenttín, Matthew B. Jones, Bertram Ludäscher, Timothy M. McPhillips, Paolo Missier, Christopher R. Schwalm, Peter Slaughter, David Vieglais, Lauren Walker, Yaxing Wei:
DataONE: A Data Federation with Provenance Support. IPAW 2016: 230-234 - [i1]Bertram Ludäscher, Kyle Chard, Niall Gaffney, Matthew B. Jones, Jaroslaw Nabrzyski, Victoria Stodden, Matthew J. Turk:
Capturing the "Whole Tale" of Computational Research: Reproducibility in Computing Environments. CoRR abs/1610.09958 (2016) - 2015
- [c15]Adila Krisnadhi, Yingjie Hu, Krzysztof Janowicz, Pascal Hitzler, Robert A. Arko, Suzanne Carbotte, Cynthia Chandler, Michelle Cheatham, Douglas Fils, Timothy W. Finin, Peng Ji, Matthew B. Jones, Nazifa Karima, Kerstin A. Lehnert, Audrey Mickle, Thomas W. Narock, Margaret O'Brien, Lisa Raymond, Adam Shepherd, Mark Schildhauer, Peter Wiebe:
The GeoLink Modular Oceanography Ontology. ISWC (2) 2015: 301-309 - [c14]Adila Alfa Krisnadhi, Yingjie Hu, Krzysztof Janowicz, Pascal Hitzler, Robert A. Arko, Suzanne Carbotte, Cynthia Chandler, Michelle Cheatham, Douglas Fils, Tim Finin, Peng Ji, Matthew B. Jones, Nazifa Karima, Kerstin A. Lehnert, Audrey Mickle, Tom Narock, Margaret O'Brien, Lisa Raymond, Adam Shepherd, Mark Schildhauer, Peter Wiebe:
The GeoLink Framework for Pattern-based Linked Data Integration. ISWC (Posters & Demos) 2015 - 2011
- [c13]Nicholas C. Dexter, John W. Cobb, David Vieglais, Matthew B. Jones, Mike Lowe:
DataONE member node pilot integration with TeraGrid? TG 2011: 13:1-13:2 - 2010
- [j9]Matthew B. Jones, Corinna Gries:
Advances in environmental information management. Ecol. Informatics 5(1): 1-2 (2010) - [j8]Ben Leinfelder, Jing Tao, Duane Costa, Matthew B. Jones, Mark Servilla, Margaret O'Brien, Chad Burt:
A metadata-driven approach to loading and querying heterogeneous scientific data. Ecol. Informatics 5(1): 3-8 (2010) - [j7]Derik Barseghian, Ilkay Altintas, Matthew B. Jones, Daniel Crawl, Nathan Potter, James Gallagher, Peter C. Cornillon, Mark Schildhauer, Elizabeth T. Borer, Eric W. Seabloom, Parviez R. Hosseini:
Workflows and extensions to the Kepler scientific workflow system to support environmental sensor data access and analysis. Ecol. Informatics 5(1): 42-50 (2010) - [c12]Shawn Bowers, Huiping Cao, Mark Schildhauer, Matthew B. Jones, Ben Leinfelder, Margaret O'Brien:
A semantic annotation framework for retrieving and analyzing observational datasets. ESAIR 2010: 31-32
2000 – 2009
- 2009
- [c11]Chad Berkley, Shawn Bowers, Matthew B. Jones, Joshua S. Madin, Mark Schildhauer:
Improving Data Discovery for Metadata Repositories through Semantic Search. CISIS 2009: 1152-1159 - [c10]Jianwu Wang, Ilkay Altintas, Parviez R. Hosseini, Derik Barseghian, Daniel Crawl, Chad Berkley, Matthew B. Jones:
Accelerating Parameter Sweep Workflows by Utilizing Ad-hoc Network Computing Resources: An Ecological Example. SERVICES I 2009: 267-274 - [p2]Bertram Ludäscher, Ilkay Altintas, Shawn Bowers, Julian Cummings, Terence Critchlow, Ewa Deelman, David De Roure, Juliana Freire, Carole A. Goble, Matthew B. Jones, Scott Klasky, Timothy M. McPhillips, Norbert Podhorszki, Cláudio T. Silva, Ian J. Taylor, Mladen A. Vouk:
Scientific Process Automation and Workflow Management. Scientific Data Management 2009 - 2008
- [c9]Jianwu Wang, Ilkay Altintas, Chad Berkley, Lucas Gilbert, Matthew B. Jones:
A High-Level Distributed Execution Framework for Scientific Workflows. eScience 2008: 634-639 - 2007
- [j6]Matthew B. Jones:
Meta-information systems and ontologies: A special feature from ISEI'06. Ecol. Informatics 2(3): 193-194 (2007) - [j5]Christopher Jones, Carol Blanchette, Matthew Brooke, John Harris, Matthew B. Jones, Mark Schildhauer:
A metadata-driven framework for generating field data entry interfaces in ecology. Ecol. Informatics 2(3): 270-278 (2007) - [j4]William Michener, James Beach, Matthew B. Jones, Bertram Ludäscher, Deana Pennington, Ricardo Scachetti Pereira, Arcot Rajasekar, Mark Schildhauer:
A knowledge environment for the biodiversity and ecological sciences. J. Intell. Inf. Syst. 29(1): 111-126 (2007) - [p1]Deana D. Pennington, Dan Higgins, A. Townsend Peterson, Matthew B. Jones, Bertram Ludäscher, Shawn Bowers:
Ecological Niche Modeling Using the Kepler Workflow System. Workflows for e-Science, Scientific Workflows for Grids 2007: 91-108 - 2006
- [j3]Bertram Ludäscher, Ilkay Altintas, Chad Berkley, Dan Higgins, Efrat Jaeger, Matthew B. Jones, Edward A. Lee, Jing Tao, Yang Zhao:
Scientific workflow management and the Kepler system. Concurr. Comput. Pract. Exp. 18(10): 1039-1065 (2006) - 2005
- [c8]William Michener, James Beach, Shawn Bowers, Laura L. Downey, Matthew B. Jones, Bertram Ludäscher, Deana Pennington, Arcot Rajasekar, Samantha Romanello, Mark Schildhauer, David Vieglais, Jianting Zhang:
Data Integration and Workflow Solutions for Ecology. DILS 2005: 321-324 - [c7]Samantha Romanello, James Beach, Shawn Bowers, Matthew B. Jones, Bertram Ludäscher, William Michener, Deana Pennington, Arcot Rajasekar, Mark Schildhauer:
Creating and Providing Data Management Services for the Biological and Ecological Sciences: Science Environment for Ecological Knowledge. SSDBM 2005: 28-31 - [c6]Chad Berkley, Shawn Bowers, Matthew B. Jones, Bertram Ludäscher, Mark Schildhauer, Jing Tao:
Incorporating Semantics in Scientific Workflow Authoring. SSDBM 2005: 75-78 - [c5]Judith Bayard Cushing, Kristin Vanderbilt, James Brunt, Amarnath Gupta, Matthew B. Jones, Peter McCartney:
NSF Long Term Ecological Research Sites - Praxis et Theoria. SSDBM 2005: 303-306 - 2004
- [j2]Matthew B. Jones:
Learning the lessons of history? Electronic records in the United Kingdom acute hospitals, 1988-2002. Health Informatics J. 10(4): 253-263 (2004) - [c4]Ilkay Altintas, Chad Berkley, Efrat Jaeger, Matthew B. Jones, Bertram Ludäscher, Steve Mock:
Kepler: An Extensible System for Design and Execution of Scientific Workflows. SSDBM 2004: 423-424 - 2002
- [c3]Daniel Higgins Metacat, Chad Berkley, Matthew B. Jones:
Managing Heterogeneous Ecological Data Using Morpho. SSDBM 2002: 69-76 - 2001
- [j1]Matthew B. Jones, Chad Berkley, Jivka Bojilova, Mark Schildhauer:
Managing Scientific Metadata. IEEE Internet Comput. 5(5): 59-68 (2001) - [c2]Chad Berkley, Matthew B. Jones, Jivka Bojilova, Daniel Higgins Metacat:
a Schema-Independent XML Database System. SSDBM 2001: 171-179
1990 – 1999
- 1999
- [c1]Matthew B. Jones, Rudolf Nottrott, Mark Schildhauer:
Using XML-Structured Meta-data to Automate Quality Assurance Processing for Ecological Data. MD 1999
Coauthor Index
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