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2010 – 2019
- 2018
[j7]Yuedong Yang
, Jianzhao Gao, Jihua Wang, Rhys Heffernan, Jack Hanson, Kuldip K. Paliwal, Yaoqi Zhou:
Sixty-five years of the long march in protein secondary structure prediction: the final stretch? Briefings Bioinform. 19(3): 482-494 (2018)- [j6]Rhys Heffernan, Kuldip K. Paliwal, James G. Lyons, Jaswinder Singh, Yuedong Yang, Yaoqi Zhou:
Single-sequence-based prediction of protein secondary structures and solvent accessibility by deep whole-sequence learning. J. Comput. Chem. 39(26): 2210-2216 (2018) - [j5]Jaswinder Singh, Jack Hanson, Rhys Heffernan, Kuldip K. Paliwal, Yuedong Yang, Yaoqi Zhou:
Detecting Proline and Non-Proline Cis Isomers in Protein Structures from Sequences Using Deep Residual Ensemble Learning. J. Chem. Inf. Model. 58(9): 2033-2042 (2018) - 2017
- [j4]Rhys Heffernan, Yuedong Yang, Kuldip K. Paliwal, Yaoqi Zhou:
Capturing non-local interactions by long short-term memory bidirectional recurrent neural networks for improving prediction of protein secondary structure, backbone angles, contact numbers and solvent accessibility. Bioinform. 33(18): 2842-2849 (2017) - 2016
- [j3]Rhys Heffernan, Abdollah Dehzangi, James G. Lyons, Kuldip K. Paliwal, Alok Sharma, Jihua Wang, Abdul Sattar, Yaoqi Zhou, Yuedong Yang:
Highly accurate sequence-based prediction of half-sphere exposures of amino acid residues in proteins. Bioinform. 32(6): 843-849 (2016) - 2015
- [j2]Abdollah Dehzangi, Sohrab Sohrabi, Rhys Heffernan, Alok Sharma, James G. Lyons, Kuldip K. Paliwal, Abdul Sattar:
Gram-positive and gram-negative subcellular localization using rotation forest and physicochemical-based features. BMC Bioinform. 16(S-4): S1 (2015) - 2014
- [j1]James G. Lyons, Abdollah Dehzangi, Rhys Heffernan, Alok Sharma, Kuldip K. Paliwal, Abdul Sattar, Yaoqi Zhou, Yuedong Yang:
Predicting backbone Cα angles and dihedrals from protein sequences by stacked sparse auto-encoder deep neural network. J. Comput. Chem. 35(28): 2040-2046 (2014)
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