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ORCIDHansaim Lim
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2020 – today
- 2022
[j9]Hansaim Lim
, Chung-Jung Tsai, Ozlem Keskin, Ruth Nussinov, Attila Gürsoy:
HMI-PRED 2.0: a biologist-oriented web application for prediction of host-microbe protein-protein interaction by interface mimicry. Bioinform. 38(21): 4962-4965 (2022)- [j8]Yang Liu, Hansaim Lim, Lei Xie:
Exploration of chemical space with partial labeled noisy student self-training and self-supervised graph embedding. BMC Bioinform. 23-S(3): 158 (2022) - 2021
- [j7]Tian Cai, Hansaim Lim, Kyra Alyssa Abbu, Yue Qiu, Ruth Nussinov, Lei Xie:
MSA-Regularized Protein Sequence Transformer toward Predicting Genome-Wide Chemical-Protein Interactions: Application to GPCRome Deorphanization. J. Chem. Inf. Model. 61(4): 1570-1582 (2021) - [j6]Hansaim Lim, Lei Xie:
A New Weighted Imputed Neighborhood-Regularized Tri-Factorization One-Class Collaborative Filtering Algorithm: Application to Target Gene Prediction of Transcription Factors. IEEE ACM Trans. Comput. Biol. Bioinform. 18(1): 126-137 (2021) - 2020
- [b1]Hansaim Lim:
Machine Learning Applications for Drug Repurposing. City University of New York, USA, 2020 - [j5]Yue Qiu, Tianhuan Lu, Hansaim Lim, Lei Xie:
A Bayesian approach to accurate and robust signature detection on LINCS L1000 data. Bioinform. 36(9): 2787-2795 (2020)
2010 – 2019
- 2019
- [j4]Mohamed Ayed, Hansaim Lim, Lei Xie:
Biological representation of chemicals using latent target interaction profile. BMC Bioinform. 20-S(24): 674 (2019) - [j3]Hansaim Lim, Di He, Yue Qiu, Patrycja Krawczuk, Xiaoru Sun, Lei Xie:
Rational discovery of dual-indication multi-target PDE/Kinase inhibitor for precision anti-cancer therapy using structural systems pharmacology. PLoS Comput. Biol. 15(6) (2019) - 2018
- [j2]Annie Wang, Hansaim Lim, Shu-Yuan Cheng, Lei Xie:
ANTENNA, a Multi-Rank, Multi-Layered Recommender System for Inferring Reliable Drug-Gene-Disease Associations: Repurposing Diazoxide as a Targeted Anti-Cancer Therapy. IEEE ACM Trans. Comput. Biol. Bioinform. 15(6): 1960-1967 (2018) - [c1]Hansaim Lim, Lei Xie:
Target Gene Prediction of Transcription Factor Using a New Neighborhood-regularized Tri-factorization One-class Collaborative Filtering Algorithm. BCB 2018: 1-10 - 2016
- [j1]Hansaim Lim, Aleksandar Poleksic, Yuan Yao, Hanghang Tong, Di He, Luke Zhuang, Patrick Meng, Lei Xie:
Large-Scale Off-Target Identification Using Fast and Accurate Dual Regularized One-Class Collaborative Filtering and Its Application to Drug Repurposing. PLoS Comput. Biol. 12(10) (2016)
Coauthor Index
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