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2020 – today
- 2024
[j20]Raquel Lopes Costa, Luiz M. R. Gadelha Jr.
, Mirela D'arc, Marcelo Ribeiro-Alves, David L. Robertson, Jean-Marc Schwartz, Marcelo A. Soares, Fábio Porto:
HIHISIV: a database of gene expression in HIV and SIV host immune response. BMC Bioinform. 25(1): 125 (2024)- 2022
- [j19]Joanne Watson, Michael Smith, Chiara Francavilla, Jean-Marc Schwartz:
SubcellulaRVis: a web-based tool to simplify and visualise subcellular compartment enrichment. Nucleic Acids Res. 50(W1): 718-725 (2022) - 2021
- [j18]Joseph H. R. Hetmanski, Matthew C. Jones, Fatima Chunara, Jean-Marc Schwartz, Patrick T. Caswell:
Combinatorial mathematical modelling approaches to interrogate rear retraction dynamics in 3D cell migration. PLoS Comput. Biol. 17(3) (2021)
2010 – 2019
- 2019
- [j17]Jamie Soul, Tim E. Hardingham, Ray P. Boot-Handford, Jean-Marc Schwartz:
SkeletalVis: an exploration and meta-analysis data portal of cross-species skeletal transcriptomics data. Bioinform. 35(13): 2283-2290 (2019) - [j16]Petronela Buiga, Ari Elson, Lydia Tabernero, Jean-Marc Schwartz:
Modelling the role of dual specificity phosphatases in herceptin resistant breast cancer cell lines. Comput. Biol. Chem. 80: 138-146 (2019) - [r1]Jean-Marc Schwartz, Zita Soons:
Metabolic Models. Encyclopedia of Bioinformatics and Computational Biology (2) 2019: 438-444 - 2018
- [j15]Ruth Alexandra Stoney, Jean-Marc Schwartz, David L. Robertson, Goran Nenadic:
Using set theory to reduce redundancy in pathway sets. BMC Bioinform. 19(1): 386:1-386:11 (2018) - [j14]Petronela Buiga, Ari Elson, Lydia Tabernero, Jean-Marc Schwartz:
Regulation of dual specificity phosphatases in breast cancer during initial treatment with Herceptin: a Boolean model analysis. BMC Syst. Biol. 12(1): 13-24 (2018) - [c8]Petronela Buiga, Jamie Soul, Jean-Marc Schwartz:
A meta-analysis portal for human breast cancer transcriptomics data: BreastCancerVis. BIBM 2018: 260-264 - 2017
- [j13]Stephen P. Chapman, Marcelo Trindade dos Santos, Giles N. Johnson, Maurício Vieira Kritz, Jean-Marc Schwartz:
Cyclic decomposition explains a photosynthetic down regulation for Chlamydomonas reinhardtii. Biosyst. 162: 119-127 (2017) - [j12]Emyr Bakker, Kun Tian, Luciano Mutti, Constantinos Demonacos, Jean-Marc Schwartz, Marija Krstic-Demonacos:
Insight into glucocorticoid receptor signalling through interactome model analysis. PLoS Comput. Biol. 13(11) (2017) - 2016
- [j11]Jamie Soul, Sara L. Dunn, Tim E. Hardingham, Ray P. Boot-Handford, Jean-Marc Schwartz:
PhenomeScape: a cytoscape app to identify differentially regulated sub-networks using known disease associations. Bioinform. 32(24): 3847-3849 (2016) - [j10]Joseph H. R. Hetmanski, Egor Zindy, Jean-Marc Schwartz, Patrick T. Caswell:
A MAPK-Driven Feedback Loop Suppresses Rac Activity to Promote RhoA-Driven Cancer Cell Invasion. PLoS Comput. Biol. 12(5) (2016) - 2015
- [j9]Oyebode J. Oyeyemi, Oluwafemi Davies, David L. Robertson, Jean-Marc Schwartz:
A logical model of HIV-1 interactions with the T-cell activation signalling pathway. Bioinform. 31(7): 1075-1083 (2015) - 2014
- [c7]Jean-Marc Schwartz, Peter Neal Taylor:
In silico prediction of elementary mode fluxes. IWBBIO 2014: 183-191 - [c6]Michelle Hussain, Benjamin Stutchbury, Kun Tian, Rengül Çetin-Atalay, Jean-Marc Schwartz, Marija Krstic-Demonacos:
Applications of p53 interactome analysis to personalised drug discovery. IWBBIO 2014: 192-203 - 2013
- [j8]Chengkun Wu, Jean-Marc Schwartz, Goran Nenadic:
PathNER: a tool for systematic identification of biological pathway mentions in the literature. BMC Syst. Biol. 7(S-3): S2 (2013) - 2012
- [j7]Thomas Williamson, Delali A. Adiamah, Jean-Marc Schwartz, Lubomira Stateva:
Exploring the genetic control of glycolytic oscillations in Saccharomyces Cerevisiae. BMC Syst. Biol. 6: 108 (2012) - [j6]Yu-Yao Tseng, Suzanne M. Hunt, Christian Heintzen, Susan K. Crosthwaite, Jean-Marc Schwartz:
Comprehensive Modelling of the Neurospora Circadian Clock and Its Temperature Compensation. PLoS Comput. Biol. 8(3) (2012) - 2010
- [j5]Delali A. Adiamah, Julia Handl, Jean-Marc Schwartz:
Streamlining the construction of large-scale dynamic models using generic kinetic equations. Bioinform. 26(10): 1324-1331 (2010) - [j4]Karin Radrich, Yoshimasa Tsuruoka, Paul D. Dobson, Albert Gevorgyan, Neil Swainston, Gino Baart, Jean-Marc Schwartz:
Integration of metabolic databases for the reconstruction of genome-scale metabolic networks. BMC Syst. Biol. 4: 114 (2010)
2000 – 2009
- 2009
- [j3]Thomas Williamson, Jean-Marc Schwartz, Douglas B. Kell, Lubomira Stateva:
Deterministic mathematical models of the cAMP pathway in Saccharomyces cerevisiae. BMC Syst. Biol. 3: 70 (2009) - 2006
- [j2]Jean-Marc Schwartz, Minoru Kanehisa:
Quantitative elementary mode analysis of metabolic pathways: the example of yeast glycolysis. BMC Bioinform. 7: 186 (2006) - [c5]Jose C. Nacher, Jean-Marc Schwartz, Minoru Kanehisa, Tatsuya Akutsu:
Identification of metabolic units induced by environmental signals. ISMB (Supplement of Bioinformatics) 2006: 375-383 - 2005
- [j1]Jean-Marc Schwartz, Marc Denninger, Denis Rancourt, Christian Moisan, Denis Laurendeau:
Modelling liver tissue properties using a non-linear visco-elastic model for surgery simulation. Medical Image Anal. 9(2): 103-112 (2005) - [c4]Jean-Marc Schwartz, Minoru Kanehisa:
A quadratic programming approach for decomposing steady-state metabolic flux distributions onto elementary modes. ECCB/JBI 2005: 205 - 2004
- [c3]Marielle Mokhtari, François Bernier, François Lemieux, H. Martel, Jean-Marc Schwartz, Denis Laurendeau, Alexandra Branzan Albu:
Virtual Environment and Sensori-Motor Activities: Haptic, Auditory and Olfactory Devices. WSCG (Posters) 2004: 109-112 - 2003
- [c2]Alexandra Branzan Albu, Jean-Marc Schwartz, Denis Laurendeau, Christian Moisan:
Integrating Geometric and Biomechanical Models of a Liver Tumour for Cryosurgery Simulation. IS4TH 2003: 121-131 - 2001
- [c1]Jean-Marc Schwartz, Ève Langelier, Christian Moisan, Denis Laurendeau:
Non-linear Soft Tissue Deformations for the Simulation of Percutaneous Surgeries. MICCAI 2001: 1271-1272
Coauthor Index
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