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ORCIDTulio de Oliveira
Person information
- affiliation: University of KwaZulu-Natal, Durban, South Africa
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2020 – today
- 2023
[j14]James Emmanuel San
, Stephanie van Wyk, Houriiyah Tegally, Simeon Eche, Eduan Wilkinson, Aquillah M. Kanzi, Tulio de Oliveira, Anmol M. Kiran:
SeqPanther: Sequence manipulation and mutation statistics toolset. J. Open Source Softw. 8(87): 5305 (2023)- 2020
- [j13]Sara Cleemput, Wim Dumon, Vagner Fonseca, Wasim Abdool Karim, Marta Giovanetti, Luiz Carlos Alcantara, Koen Deforche, Tulio de Oliveira:
Genome Detective Coronavirus Typing Tool for rapid identification and characterization of novel coronavirus genomes. Bioinform. 36(11): 3552-3555 (2020)
2010 – 2019
- 2019
- [j12]Michael Vilsker, Yumna Moosa, Sam Nooij, Vagner Fonseca, Yoika Ghysens, Korneel Dumon, Raf Pauwels, Luiz Carlos Alcantara, Ewout Vanden Eynden, Anne-Mieke Vandamme, Koen Deforche, Tulio de Oliveira:
Genome Detective: an automated system for virus identification from high-throughput sequencing data. Bioinform. 35(5): 871-873 (2019) - 2018
- [j11]Frédéric Lemoine, Jean-Baka Domelevo Entfellner, Eduan Wilkinson, Damien Correia, Miraine Dávila Felipe, Tulio de Oliveira, Olivier Gascuel:
Renewing Felsenstein's phylogenetic bootstrap in the era of big data. Nat. 556(7702): 452-456 (2018) - 2016
- [j10]Megan Druce, Chantal Hulo, Patrick Masson, Paula Sommer, Ioannis Xenarios, Philippe Le Mercier, Tulio de Oliveira:
Improving HIV proteome annotation: new features of BioAfrica HIV Proteomics Resource. Database J. Biol. Databases Curation 2016 (2016) - [j9]Nicola J. Mulder, Alan Christoffels, Tulio de Oliveira, Junaid Gamieldien, Scott Hazelhurst, Fourie Joubert, Judit Kumuthini, Ché S. Pillay, Jacky L. Snoep, Özlem Tastan Bishop, Nicki Tiffin:
The Development of Computational Biology in South Africa: Successes Achieved and Lessons Learnt. PLoS Comput. Biol. 12(2) (2016) - 2015
- [c2]Megan Druce, Paula Sommer, Philippe Le Mercier, Chantal Hulo, Patrick Masson, Tulio de Oliveira:
Human immunodeficiency virus (HIV) proteomics resource at BioAfrica. BCB 2015: 497-498 - 2014
- [j8]Justen Manasa, Richard Lessells, Theresa Rossouw, Kevindra Naidu, Cloete Van Vuuren, Dominique Goedhals, Gert van Zyl, P. Armand Bester, Andrew Skingsley, Katharine Stott, Siva Danaviah, Terusha Chetty, Lavanya Singh, Pravi Moodley, Collins Iwuji, Nuala McGrath, Christopher J. Seebregts, Tulio de Oliveira:
Southern African Treatment Resistance Network (SATuRN) RegaDB HIV drug resistance and clinical management database: supporting patient management, surveillance and research in southern Africa. Database J. Biol. Databases Curation 2014 (2014) - 2013
- [j7]François Chevenet, Matthieu Jung, Martine Peeters, Tulio de Oliveira, Olivier Gascuel:
Searching for virus phylotypes. Bioinform. 29(5): 561-570 (2013) - [j6]Pieter Libin, Gertjan Beheydt, Koen Deforche, Stijn Imbrechts, Fossie Ferreira, Kristel Van Laethem, Kristof Theys, Ana Patricia Carvalho, Joana Cavaco-Silva, Giuseppe Lapadula, Carlo Torti, Matthias Assel, Stefan Wesner, Joke Snoeck, Jean Ruelle, Annelies De Bel, Patrick Lacor, Paul De Munter, Eric Van Wijngaerden, Maurizio Zazzi, Rolf Kaiser, Ahidjo Ayouba, Martine Peeters, Tulio de Oliveira, Luiz Carlos Júnior Alcântara, Zehava Grossman, Peter M. A. Sloot, Dan Otelea, Simona Paraschiv, Charles A. Boucher, Ricardo Camacho, Anne-Mieke Vandamme:
RegaDB: community-driven data management and analysis for infectious diseases. Bioinform. 29(11): 1477-1480 (2013) - [c1]Pascal S. Brandt, Deshendran Moodley, Anban W. Pillay, Christopher J. Seebregts, Tulio de Oliveira:
An Investigation of Classification Algorithms for Predicting HIV Drug Resistance without Genotype Resistance Testing. FHIES 2013: 236-253 - 2012
- [j5]Ben Murrell, Tulio de Oliveira, Chris Seebregts, Sergei L. Kosakovsky Pond, Konrad Scheffler:
Modeling HIV-1 Drug Resistance as Episodic Directional Selection. PLoS Comput. Biol. 8(5) (2012)
2000 – 2009
- 2009
- [j4]Pascale Gaudet, Lydie Lane, Petra Fey, Alan J. Bridge, Sylvain Poux, Andrea H. Auchincloss, Kristian B. Axelsen, Silvia Braconi-Quintaje, Emmanuel Boutet, P. Brown, Elisabeth Coudert, Ruchira S. Datta, W. C. de Lima, Tulio de Oliveira, Severine Duvaud, N. Farriol-Mathis, Serenella Ferro-Rojas, Marc Feuermann, Alain Gateau, Ursula Hinz, Chantal Hulo, Janet James, Silvia Jimenez, Florence Jungo, Guillaume Keller, Phillippe Lemercier, Damien Lieberherr, Madelaine Moinat, Anastasia N. Nikolskaya, Ivo Pedruzzi, Catherine Rivoire, Bernd Roechert, Michel Schneider, E. Stanley, Michael Tognolli, Kimmen Sjölander, Lydie Bougueleret, Rex L. Chisholm, Amos Bairoch:
Collaborative annotation of genes and proteins between UniProtKB/Swiss-Prot and dictyBase. Database J. Biol. Databases Curation 2009 (2009) - [j3]Robert Belshaw, Tulio de Oliveira, Sidney Markowitz, Andrew Rambaut:
The RNA Virus Database. Nucleic Acids Res. 37(Database-Issue): 431-435 (2009) - [j2]Luiz Carlos Júnior Alcântara, Sharon Cassol, Pieter Libin, Koen Deforche, Oliver G. Pybus, Marc Van Ranst, Bernardo Galvão-Castro, Anne-Mieke Vandamme, Tulio de Oliveira:
A standardized framework for accurate, high-throughput genotyping of recombinant and non-recombinant viral sequences. Nucleic Acids Res. 37(Web-Server-Issue): 634-642 (2009) - 2005
- [j1]Tulio de Oliveira, Koen Deforche, Sharon Cassol, Mika Salminen, Dimitris Paraskevis, Chris Seebregts, Joke Snoeck, Estrelita J. Janse van Rensburg, Annemarie M. J. Wensing, David A. van de Vijver, Charles A. Boucher, Ricardo Camacho, Anne-Mieke Vandamme:
An automated genotyping system for analysis of HIV-1 and other microbial sequences. Bioinform. 21(19): 3797-3800 (2005)
Coauthor Index
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