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ORCIDJan Kybic
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2020 – today
- 2024
[c61]Jan Kybic
, David Pakizer, Jirí Kozel, Patricie Michalcová, Frantisek Charvát, David Skoloudík:
Atherosclerotic Plaque Stability Prediction from Longitudinal Ultrasound Images. MLMI@MICCAI (1) 2024: 124-132- 2023
- [c60]Denis Barucic, Jan Kybic:
Learning to Segment From Object Thickness Annotations. ISBI 2023: 1-4 - 2022
- [j23]Denis Barucic, Sumit Kaushik, Jan Kybic, Jarmila Stanková, Petr Dzubák, Marián Hajdúch:
Characterization of drug effects on cell cultures from phase-contrast microscopy images. Comput. Biol. Medicine 151(Part): 106171 (2022) - [c59]Denis Barucic, Jan Kybic:
Fast Learning from Label Proportions with Small Bags. ICIP 2022: 3156-3160 - [c58]Denis Barucic, Jan Kybic:
Learning to Segment from Object Sizes. ITAT 2022: 55-60 - [c57]Hana Mertanová, Jan Kybic, Jarmila Stanková, Petr Dzubák, Marián Hajdúch:
Learning to segment cell nuclei in phase-contrast microscopy from fluorescence images for drug discovery. Medical Imaging: Image Processing 2022 - [i4]Denis Barucic, Jan Kybic:
Learning to segment from object sizes. CoRR abs/2207.00289 (2022) - [i3]Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Patrick Godau, Veronika Cheplygina, Michal Kozubek, Sharib Ali, Anubha Gupta, Jan Kybic, J. Alison Noble, Carlos Ortiz-de-Solórzano, Samiksha Pachade, Caroline Petitjean, Daniel Sage, Donglai Wei, Elizabeth Wilden, Deepak Alapatt, Vincent Andrearczyk, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Vivek Singh Bawa, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Jinwook Choi, Olivier Commowick, Marie Daum, Adrien Depeursinge, Reuben Dorent, Jan Egger, Hannah Eichhorn, Sandy Engelhardt, Melanie Ganz, Gabriel Girard, Lasse Hansen, Mattias P. Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Hyunjeong Kim, Bennett A. Landman, Hongwei Bran Li, Jianning Li, Jun Ma, Anne L. Martel, et al.:
Biomedical image analysis competitions: The state of current participation practice. CoRR abs/2212.08568 (2022) - 2021
- [c56]Sumit Kaushik, Jan Kybic, Avinash Bansal, Temesgen Bihonegn, Jan Slovak:
Potential Biomarkers From Positive Definite 4th Order Tensors In Hardi. ISBI 2021: 1003-1006 - [i2]Denis Barucic, Jan Kybic, Olga Teplá, Zinovij Topurko, Irena Kratochvílová:
Automatic evaluation of human oocyte developmental potential from microscopy images. CoRR abs/2103.00302 (2021) - [i1]Denis Barucic, Jan Kybic:
Fast learning from label proportions with small bags. CoRR abs/2110.03426 (2021) - 2020
- [j22]Jirí Borovec, Jan Kybic, Ignacio Arganda-Carreras, Dmitry V. Sorokin, Gloria Bueno, Alexander V. Khvostikov, Spyridon Bakas, Eric I-Chao Chang, Stefan Heldmann, Kimmo Kartasalo, Leena Latonen, Johannes Lotz, Michelle Noga, Sarthak Pati, Kumaradevan Punithakumar, Pekka Ruusuvuori, Andrzej Skalski, Nazanin Tahmasebi, Masi Valkonen, Ludovic Venet, Yizhe Wang, Nick Weiss, Marek Wodzinski, Yu Xiang, Yan Xu, Yan Yan, Paul A. Yushkevich, Shengyu Zhao, Arrate Muñoz-Barrutia:
ANHIR: Automatic Non-Rigid Histological Image Registration Challenge. IEEE Trans. Medical Imaging 39(10): 3042-3052 (2020) - [c55]Jan Hering, Jan Kybic:
Generalized Multiple Instance Learning for Cancer Detection in Digital Histopathology. ICIAR (2) 2020: 274-282 - [c54]Jan Hering, Jan Kybic:
Multiple Instance Learning Via Deep Hierarchical Exploration for Histology Image Classification. ISBI 2020: 235-238 - [e2]Ziga Spiclin, Jamie McClelland, Jan Kybic, Orcun Goksel:
Biomedical Image Registration - 9th International Workshop, WBIR 2020, Portorož, Slovenia, December 1-2, 2020, Proceedings. Lecture Notes in Computer Science 12120, Springer 2020, ISBN 978-3-030-50119-8 [contents]
2010 – 2019
- 2018
- [j21]Przemyslaw Glowacki, Miguel Amável Pinheiro, Agata Mosinska, Engin Türetken, Daniel Lebrecht, Raphael Sznitman, Anthony Holtmaat, Jan Kybic, Pascal Fua:
Reconstructing Evolving Tree Structures in Time Lapse Sequences by Enforcing Time-Consistency. IEEE Trans. Pattern Anal. Mach. Intell. 40(3): 755-761 (2018) - [c53]Jirí Borovec, Arrate Muñoz-Barrutia, Jan Kybic:
Benchmarking of Image Registration Methods for Differently Stained Histological Slides. ICIP 2018: 3368-3372 - [c52]Miguel Amável Pinheiro, Jan Kybic:
Incremental B-spline deformation model for geometric graph matching. ISBI 2018: 1079-1082 - [c51]Jan Kybic, Jirí Borovec:
Fast Registration by Boundary Sampling and Linear Programming. MICCAI (1) 2018: 783-791 - [c50]Jan Hering, Jan Kybic, Lukás Lambert:
Detecting multiple myeloma via generalized multiple-instance learning. Medical Imaging: Image Processing 2018: 105740N - 2017
- [j20]Jimena Olveres, Rodrigo Nava, Boris Escalante-Ramírez, Enrique Vallejo, Jan Kybic:
Left ventricle Hermite-based segmentation. Comput. Biol. Medicine 87: 236-249 (2017) - [j19]Jirí Borovec, Jan Svihlík, Jan Kybic, David Habart:
Supervised and unsupervised segmentation using superpixels, model estimation, and graph cut. J. Electronic Imaging 26(6): 61610 (2017) - [j18]Jirí Borovec, Jan Kybic, Akihiro Sugimoto:
Region growing using superpixels with learned shape prior. J. Electronic Imaging 26(6): 61611 (2017) - [j17]Miguel Amável Pinheiro, Jan Kybic, Pascal Fua:
Geometric Graph Matching Using Monte Carlo Tree Search. IEEE Trans. Pattern Anal. Mach. Intell. 39(11): 2171-2185 (2017) - [c49]Jirí Borovec, Jan Kybic, Rodrigo Nava:
Detection and Localization of Drosophila Egg Chambers in Microscopy Images. MLMI@MICCAI 2017: 19-26 - 2016
- [j16]Francisco Martinez-Martinez, Jan Kybic, Lukás Lambert, Zuzana Mecková:
Fully automated classification of bone marrow infiltration in low-dose CT of patients with multiple myeloma based on probabilistic density model and supervised learning. Comput. Biol. Medicine 71: 57-66 (2016) - [c48]Jirí Borovec, Jan Kybic:
Binary Pattern Dictionary Learning for Gene Expression Representation in Drosophila Imaginal Discs. ACCV Workshops (2) 2016: 555-569 - [c47]Jan Svihlík, Jan Kybic, David Habart, Hanna Hlushak, Jirí Dvorák, Barbora Radochová:
Langerhans Islet Volume Estimation from 3D Optical Projection Tomography. ACCV Workshops (2) 2016: 583-594 - [c46]Rodrigo Nava, Germán González, Jan Kybic, Boris Escalante-Ramírez:
Characterization of hematologic malignancies based on discrete orthogonal moments. IPTA 2016: 1-6 - [c45]Jirí Dvorák, Jan Svihlík, David Habart, Jan Kybic:
Comparison of volume estimation methods for pancreatic islet cells. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging 2016: 97881K - [c44]Jan Svihlík, Jan Kybic, David Habart:
Automated separation of merged Langerhans islets. Medical Imaging: Image Processing 2016: 978438 - 2015
- [j15]Eduard Serradell, Miguel Amável Pinheiro, Raphael Sznitman, Jan Kybic, Francesc Moreno-Noguer, Pascal Fua:
Non-Rigid Graph Registration Using Active Testing Search. IEEE Trans. Pattern Anal. Mach. Intell. 37(3): 625-638 (2015) - [c43]Jan Kybic, Martin Dolejsi, Jirí Borovec:
Fast registration of segmented images by normal sampling. CVPR Workshops 2015: 11-19 - [c42]Rodrigo Nava, Jan Kybic:
Supertexton-based segmentation in early Drosophila oogenesis. ICIP 2015: 2656-2659 - [c41]Miguel Amável Pinheiro, Jan Kybic:
Geometrical graph matching using Monte Carlo tree search. ICIP 2015: 3145-3149 - [c40]Francisco Martinez-Martinez, Jan Kybic, Lukás Lambert:
Automatic detection of bone marrow infiltration by multiple myeloma detection in low-dose CT. ICIP 2015: 4813-4817 - [c39]Rodrigo Nava, Germán González, Jan Kybic, Boris Escalante-Ramírez:
Classification of Tumor Epithelium and Stroma in Colorectal Cancer Based on Discrete Tchebichef Moments. CLIP@MICCAI 2015: 79-87 - 2014
- [j14]Laura Fernandez-de-Manuel, Gert Wollny, Jan Kybic, Daniel Jimenez-Carretero, Jose M. Tellado, Enrique Ramon, Manuel Desco, Andrés Santos, Javier Pascau, María J. Ledesma-Carbayo:
Organ-focused mutual information for nonrigid multimodal registration of liver CT and Gd-EOB-DTPA-enhanced MRI. Medical Image Anal. 18(1): 22-35 (2014) - [c38]Przemyslaw Glowacki, Miguel Amável Pinheiro, Engin Türetken, Raphael Sznitman, Daniel Lebrecht, Jan Kybic, Anthony Holtmaat, Pascal Fua:
Reconstructing Evolving Tree Structures in Time Lapse Sequences. CVPR 2014: 3035-3042 - [c37]Miguel Amável Pinheiro, Jan Kybic:
Path Descriptors for Geometric Graph Matching and Registration. ICIAR (1) 2014: 3-11 - [c36]Jan Kybic, Jirí Borovec:
Automatic simultaneous segmentation and fast registration of histological images. ISBI 2014: 774-777 - [c35]Thomas Dietenbeck, François Varray, Jan Kybic, Olivier Basset, Christian Cachard:
Neuromuscular fiber segmentation through particle filtering and discrete optimization. Medical Imaging: Image Processing 2014: 90340B - [c34]Jan Svihlík, Jan Kybic, David Habart, Zuzana Berková, Peter Girman, Jan Kríz, Klára Zacharovová:
Classification of microscopy images of Langerhans islets. Medical Imaging: Image Processing 2014: 90341S - [c33]Jan Kybic:
Registration of segmented histological images using thin plate splines and belief propagation. Medical Imaging: Image Processing 2014: 90343E - 2013
- [j13]Marian Uhercik, Jan Kybic, Yue Zhao, Christian Cachard, Hervé Liebgott:
Line filtering for surgical tool localization in 3D ultrasound images. Comput. Biol. Medicine 43(12): 2036-2045 (2013) - [c32]Miguel Amável Pinheiro, Raphael Sznitman, Eduard Serradell, Jan Kybic, Francesc Moreno-Noguer, Pascal Fua:
Active Testing Search for Point Cloud Matching. IPMI 2013: 572-583 - [c31]Jirí Borovec, Jan Kybic, Michael Busta, Carlos Ortiz-de-Solorzano, Arrate Muñoz-Barrutia:
Registration of multiple stained histological sections. ISBI 2013: 1034-1037 - 2012
- [j12]Jan Kybic, Ivan Vnucko:
Approximate all nearest neighbor search for high dimensional entropy estimation for image registration. Signal Process. 92(5): 1302-1316 (2012) - [c30]Eduard Serradell, Przemyslaw Glowacki, Jan Kybic, Francesc Moreno-Noguer, Pascal Fua:
Robust non-rigid registration of 2D and 3D graphs. CVPR 2012: 996-1003 - [c29]François Varray, Christian Cachard, Jan Kybic, Anthony Novell, Ayache Bouakaz, Olivier Basset:
A multi-frequency approach to increase the native resolution of ultrasound images. EUSIPCO 2012: 2733-2737 - [c28]Eduard Serradell, Jan Kybic, Francesc Moreno-Noguer, Pascal Fua:
Robust elastic 2D/3D geometric graph matching. Medical Imaging: Image Processing 2012: 831408 - 2011
- [j11]Juan D. García-Arteaga, Jan Kybic, Wenjing Li:
Automatic colposcopy video tissue classification using higher order entropy-based image registration. Comput. Biol. Medicine 41(10): 960-970 (2011) - [j10]Jan Kybic, Claudia Nieuwenhuis:
Bootstrap optical flow confidence and uncertainty measure. Comput. Vis. Image Underst. 115(10): 1449-1462 (2011) - 2010
- [j9]Marian Uhercik, Jan Kybic, Hervé Liebgott, Christian Cachard:
Model Fitting Using RANSAC for Surgical Tool Localization in 3-D Ultrasound Images. IEEE Trans. Biomed. Eng. 57(8): 1907-1916 (2010) - [j8]Jan Kybic:
Bootstrap Resampling for Image Registration Uncertainty Estimation Without Ground Truth. IEEE Trans. Image Process. 19(1): 64-73 (2010)
2000 – 2009
- 2009
- [c27]Jan Kybic, Jakub Kratky:
Discrete curvature calculation for fast level set segmentation. ICIP 2009: 3017-3020 - [c26]Martin Dolejsi, Jan Kybic, Michal Polovincak, Stanislav Tuma:
The Lung TIME: annotated lung nodule dataset and nodule detection framework. Medical Imaging: Computer-Aided Diagnosis 2009: 72601U - [c25]Jef Vandemeulebroucke, Jan Kybic, Patrick Clarysse, David Sarrut:
Respiratory Motion Estimation from Cone-Beam Projections Using a Prior Model. MICCAI (1) 2009: 365-372 - 2008
- [j7]Elisabeth Brusseau, Jan Kybic, Jean-François Deprez, Olivier Basset:
2-D Locally Regularized Tissue Strain Estimation From Radio-Frequency Ultrasound Images: Theoretical Developments and Results on Experimental Data. IEEE Trans. Medical Imaging 27(2): 145-160 (2008) - [c24]Juan D. García-Arteaga, Jan Kybic:
Regional image similarity criteria based on the Kozachenko-Leonenko entropy estimator. CVPR Workshops 2008: 1-8 - [c23]Marian Uhercik, Jan Kybic, Hervé Liebgott, Christian Cachard:
Multi-resolution parallel integral projection for fast localization of a straight electrode in 3D ultrasound images. ISBI 2008: 33-36 - [c22]Martin Dolejsi, Jan Kybic, Stanislav Tuma, Michal Polovincak:
Reducing false positive responses in lung nodule detector system by asymmetric adaboost. ISBI 2008: 656-659 - [c21]Jan Kybic:
Fast no ground truth image registration accuracy evaluation: Comparison of bootstrap and Hessian approaches. ISBI 2008: 792-795 - [c20]Jakub Kratky, Jan Kybic:
Three-dimensional segmentation of bones from CT and MRI using fast level sets. Medical Imaging: Image Processing 2008: 691447 - 2007
- [c19]Jan Kybic:
High-Dimensional Entropy Estimation for Finite Accuracy Data: R-NN Entropy Estimator. IPMI 2007: 569-580 - [c18]Juan D. García-Arteaga, Jan Kybic:
Automatic landmark detection for cervical image registration validation. Medical Imaging: Computer-Aided Diagnosis 2007: 65142S - [c17]Martin Dolejsi, Jan Kybic:
Automatic two-step detection of pulmonary nodules. Medical Imaging: Computer-Aided Diagnosis 2007: 65143J - [c16]Jan Petr, Jan Kybic:
Continuous criterion for parallel MRI reconstruction using B-spline approximation (PROBER). Medical Imaging: Image Processing 2007: 651241 - [c15]Juan D. García-Arteaga, Jan Kybic, Jia Gu, Wenjing Li:
Geometric and information constraints for automatic landmark selection in colposcopy sequences. VISAPP (1) 2007: 333-338 - 2006
- [c14]Jan Kybic, Daniel Smutek:
Image Registration Accuracy Estimation Without Ground Truth Using Bootstrap. CVAMIA 2006: 61-72 - [c13]Ignacio Arganda-Carreras, Carlos Oscar Sánchez Sorzano, Roberto Marabini, José María Carazo, Carlos Ortiz-de-Solorzano, Jan Kybic:
Consistent and Elastic Registration of Histological Sections Using Vector-Spline Regularization. CVAMIA 2006: 85-95 - [c12]Jan Kybic:
Incremental Updating of Nearest Neighbor-Based High-Dimensional Entropy Estimation. ICASSP (3) 2006: 804-807 - 2005
- [j6]Jan Kybic, Maureen Clerc, Touffic Abboud, Olivier D. Faugeras, Renaud Keriven, Théodore Papadopoulo:
A common formalism for the Integral formulations of the forward EEG problem. IEEE Trans. Medical Imaging 24(1): 12-28 (2005) - [j5]María J. Ledesma-Carbayo, Jan Kybic, Manuel Desco, Andrés Santos, Michael Sühling, Patrick R. Hunziker, Michael Unser:
Spatio-temporal nonrigid registration for ultrasound cardiac motion estimation. IEEE Trans. Medical Imaging 24(9): 1113-1126 (2005) - [c11]Leila Muresan, Bettina Heise, Erich-Peter Klement, Jan Kybic:
Quantitative analysis of microarray images. ICIP (2) 2005: 1274-1277 - [c10]Jan Kybic, Daniel Smutek:
Computational Elastography from Standard Ultrasound Image Sequences by Global Trust Region Optimization. IPMI 2005: 299-310 - 2004
- [c9]Jan Kybic:
High-dimensional mutual information estimation for image registration. ICIP 2004: 1779-1782 - [e1]Milan Sonka, Ioannis A. Kakadiaris, Jan Kybic:
Computer Vision and Mathematical Methods in Medical and Biomedical Image Analysis, ECCV 2004 Workshops CVAMIA and MMBIA, Prague, Czech Republic, May 15, 2004, Revised Selected Papers. Lecture Notes in Computer Science 3117, Springer 2004, ISBN 3-540-22675-3 [contents] - 2003
- [j4]Jan Kybic, Michael Unser:
Fast parametric elastic image registration. IEEE Trans. Image Process. 12(11): 1427-1442 (2003) - [c8]Geoffray Adde, Maureen Clerc, Olivier D. Faugeras, Renaud Keriven, Jan Kybic, Théodore Papadopoulo:
Symmetric BEM Formulation for the M/EEG Forward Problem. IPMI 2003: 524-535 - 2002
- [j3]Jan Kybic, Thierry Blu, Michael Unser:
Generalized sampling: a variational approach .I. Theory. IEEE Trans. Signal Process. 50(8): 1965-1976 (2002) - [j2]Jan Kybic, Thierry Blu, Michael Unser:
Generalized sampling: a variational approach .II. Applications. IEEE Trans. Signal Process. 50(8): 1977-1985 (2002) - [c7]María J. Ledesma-Carbayo, Jan Kybic, Michael Sühling, Patrick R. Hunziker, Manuel Desco, Andrés Santos, Michael Unser:
Cardiac ultrasound motion detection by elastic registration exploiting temporal coherence. ISBI 2002: 585-588 - [c6]Maureen Clerc, Olivier D. Faugeras, Renaud Keriven, Jan Kybic, Théodore Papadopoulo:
The fast multipole method for the direct E/MEG problem. ISBI 2002: 1023-1026 - 2001
- [c5]María J. Ledesma-Carbayo, Jan Kybic, Manuel Desco, Andrés Santos, Michael Unser:
Cardiac Motion Analysis from Ultrasound Sequences Using Non-rigid Registration. MICCAI 2001: 889-896 - [c4]Jan Kybic, Thierry Blu, Michael A. Unser:
Variational approach to tomographic reconstruction. Medical Imaging: Image Processing 2001 - 2000
- [j1]Jan Kybic, Philippe Thévenaz, Arto Nirkko, Michael Unser:
Unwarping of Unidirectionally Distorted EPI Images. IEEE Trans. Medical Imaging 19(2): 80-93 (2000) - [c3]Jan Kybic, Michael Unser:
Multidimensional Elastic Registration of Images Using Splines. ICIP 2000: 455-458
1990 – 1999
- 1999
- [c2]Jan Kybic, Philippe Thévenaz, Michael Unser:
Compensation of Unidirectional Geometric Distortion in EPI Using Spline Warping. ICIP (2) 1999: 168-172 - 1996
- [c1]Pavel Sovka, Petr Pollák, Jan Kybic:
Extended spectral subtraction. EUSIPCO 1996: 1-4
Coauthor Index
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