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ORCIDRonnie Alves
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- affiliation: Vale Institute of Technology, Belém, PA, Brazil
- affiliation: Federal University of Pará (UFPA), Belém, PA, Brazil
- affiliation (PhD 2008): University of Minho, Braga, Portugal
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2020 – today
- 2024
[j10]José de Sousa Ribeiro Filho
, Lucas Felipe Ferraro Cardoso, Raíssa Lorena Silva da Silva, Nikolas Jorge Santiago Carneiro, Vitor Cirilo Araujo Santos, Ronnie Cley de Oliveira Alves:
Explanations based on Item Response Theory (eXirt): A model-specific method to explain tree-ensemble model in trust perspective. Expert Syst. Appl. 244: 122986 (2024)- [c29]Lucas F. F. Cardoso, José de Sousa Ribeiro Filho, Vitor C. A. Santos, Regiane S. Kawasaki Francês, Ronnie C. O. Alves:
Standing on the Shoulders of Giants. BRACIS (2) 2024: 416-430 - [i11]José Ribeiro, Lucas F. F. Cardoso, Vitor C. A. Santos, Eduardo Carvalho, Nikolas Jorge S. Carneiro, Ronnie Alves:
How Reliable and Stable are Explanations of XAI Methods? CoRR abs/2407.03108 (2024) - [i10]Lucas F. F. Cardoso, José de Sousa Ribeiro Filho, Vitor C. A. Santos, Regiane S. Kawasaki Francês, Ronnie Cley de Oliveira Alves:
Standing on the shoulders of giants. CoRR abs/2409.03151 (2024) - 2022
- [c28]Lucas F. F. Cardoso, José de S. Ribeiro, Vitor Cirilo Araujo Santos, Raíssa Lorena Silva da Silva, Marcelle Pereira Mota, Ricardo B. C. Prudêncio, Ronnie C. O. Alves:
Explanation-by-Example Based on Item Response Theory. BRACIS (1) 2022: 283-297 - [i9]Lucas F. F. Cardoso, José de S. Ribeiro, Vitor C. A. Santos, Raíssa Lorena Silva da Silva, Marcelle Pereira Mota, Ricardo B. C. Prudêncio, Ronnie C. O. Alves:
Explanation-by-Example Based on Item Response Theory. CoRR abs/2210.01638 (2022) - [i8]José de S. Ribeiro, Lucas F. F. Cardoso, Raíssa Lorena Silva da Silva, Vitor C. A. Santos, Nikolas Jorge S. Carneiro, Ronnie Alves:
Global Explanation of Tree-Ensembles Models Based on Item Response Theory. CoRR abs/2210.09933 (2022) - [i7]José Ribeiro, Nikolas Jorge S. Carneiro, Ronnie Alves:
Black Box Model Explanations and the Human Interpretability Expectations - An Analysis in the Context of Homicide Prediction. CoRR abs/2210.10849 (2022) - 2021
- [j9]Raíssa Lorena Silva da Silva, Kleber Padovani de Souza, Fabiana Rodrigues de Góes, Ronnie Alves:
geneRFinder: gene finding in distinct metagenomic data complexities. BMC Bioinform. 22(1): 87 (2021) - [j8]Caio Flexa, Walisson Cardoso Gomes, Igor Moreira, Ronnie Alves, Claudomiro Sales:
Polygonal Coordinate System: Visualizing high-dimensional data using geometric DR, and a deterministic version of t-SNE. Expert Syst. Appl. 175: 114741 (2021) - [c27]José de S. Ribeiro, Raíssa Lorena Silva da Silva, Lucas F. F. Cardoso, Ronnie Alves:
Does Dataset Complexity Matters for Model Explainers? IEEE BigData 2021: 5257-5265 - [c26]José Ribeiro, Lair Meneses, Denis Costa, Wando Miranda, Ronnie Alves:
Prediction of Homicides in Urban Centers: A Machine Learning Approach. IntelliSys (3) 2021: 344-361 - [i6]Kleber Padovani de Souza, Roberto Xavier, André C. P. L. F. de Carvalho, Anna Reali, Annie Chateau, Ronnie Alves:
Towards a reinforcement learning de novo genome assembler. CoRR abs/2102.02649 (2021) - [i5]José Ribeiro, Raíssa Lorena Silva da Silva, Ronnie Alves:
Does Dataset Complexity Matters for Model Explainers? CoRR abs/2107.02661 (2021) - [i4]Lucas F. F. Cardoso, Vitor C. A. Santos, Regiane S. Kawasaki Francês, Ricardo B. C. Prudêncio, Ronnie C. O. Alves:
Data vs classifiers, who wins? CoRR abs/2107.07451 (2021) - 2020
- [c25]Lucas F. F. Cardoso, Vitor C. A. Santos, Regiane S. K. Francês, Ricardo B. C. Prudêncio, Ronnie C. O. Alves:
Decoding Machine Learning Benchmarks. BRACIS (2) 2020: 412-425 - [i3]Lucas F. F. Cardoso, Vitor C. A. Santos, Regiane S. K. Francês, Ricardo B. C. Prudêncio, Ronnie C. O. Alves:
Decoding machine learning benchmarks. CoRR abs/2007.14870 (2020) - [i2]José Ribeiro, Lair Meneses, Denis Costa, Wando Miranda, Ronnie Alves:
Prediction of Homicides in Urban Centers: A Machine Learning Approach. CoRR abs/2008.06979 (2020) - [i1]Habib Asseiss Neto, Ronnie C. O. Alves, Sérgio Vale Aguiar Campos:
NASirt: AutoML based learning with instance-level complexity information. CoRR abs/2008.11846 (2020)
2010 – 2019
- 2019
- [j7]Kleber Padovani de Souza, João Carlos Setubal, André Carlos Ponce de Leon Ferreira de Carvalho, Guilherme Oliveira, Annie Chateau, Ronnie Alves:
Machine learning meets genome assembly. Briefings Bioinform. 20(6): 2116-2129 (2019) - [j6]Habib Asseiss Neto, Wanessa L. F. Tavares, Daniela C. S. Z. Ribeiro, Ronnie C. O. Alves, Leorges M. Fonseca, Sérgio Vale Aguiar Campos:
On the utilization of deep and ensemble learning to detect milk adulteration. BioData Min. 12(1): 13:1-13:13 (2019) - [c24]Caio Flexa, Walisson Cardoso Gomes, Sérgio Viademonte, Claudomiro de Souza de Sales Junior, Ronnie Alves:
A Geometry-Based Approach to Visualize High-Dimensional Data. BRACIS 2019: 186-191 - [c23]Raíssa Lorena Silva da Silva, Kleber Padovani de Souza, Fabiana Rodrigues de Góes, Ronnie Cley de Oliveira Alves:
A Random Forest Classifier for Prokaryotes Gene Prediction. BRACIS 2019: 545-550 - [c22]Paulo Oliveira, Kleber Padovani de Souza, Ronnie Alves:
On Clustering Validation in Metagenomics Sequence Binning. BSB 2019: 3-15 - [c21]Roberto Xavier, Kleber Padovani de Souza, Annie Chateau, Ronnie Alves:
Genome Assembly Using Reinforcement Learning. BSB 2019: 16-28 - [c20]Edian F. Franco, Dener Maués, Ronnie Alves, Luis Guimarães, Vasco Ariston de Carvalho Azevedo, Artur Silva, Preetam Ghosh, Jefferson Morais, Rommel Thiago Juca Ramos:
A Clustering Approach to Identify Candidates to Housekeeping Genes Based on RNA-seq Data. BSB 2019: 83-95 - 2018
- [j5]Renato R. M. Oliveira, Gisele Lopes Nunes, Talvâne Glauber Lopes de Lima, Guilherme Oliveira, Ronnie Alves:
PIPEBAR and OverlapPER: tools for a fast and accurate DNA barcoding analysis and paired-end assembly. BMC Bioinform. 19(1): 297:1-297:10 (2018) - [c19]Vitor Cirilo Araujo Santos, Leandro Corrêa, Bianchi Serique Meiguins, Guilherme Oliveira, Ronnie Alves:
Metagenomics-based signature clustering and interactive visualization analysis. IJCNN 2018: 1-8 - [e1]Ronnie Alves:
Advances in Bioinformatics and Computational Biology - 11th Brazilian Symposium on Bioinformatics, BSB 2018, Niterói, Brazil, October 30 - November 1, 2018, Proceedings. Lecture Notes in Computer Science 11228, Springer 2018, ISBN 978-3-030-01721-7 [contents] - 2016
- [j4]François D. Richard, Ronnie Alves, Andrey V. Kajava:
Tally: a scoring tool for boundary determination between repetitive and non-repetitive protein sequences. Bioinform. 32(13): 1952-1958 (2016) - [c18]Jose Flavio de S. Dias, Ronnie Alves, Therese Commes:
A Module-Based Approach for Evaluating Differential Genome-Wide Expression Profiles. BRACIS 2016: 343-348 - [c17]Wallace P. Lira, Fernando Gama, Hivana Melo Barbosa Dall'Agnol, Ronnie Alves, Cleidson R. B. de Souza:
VCloud: adding interactiveness to word clouds for knowledge exploration in large unstructured texts. SAC 2016: 193-198 - 2015
- [c16]Sacha Beaumeunier, Jerome Audoux, Anthony Boureux, Therese Commes, Nicolas Philippe, Ronnie Alves:
The Role of Machine Learning in Finding Chimeric RNAs. DEXA Workshops 2015: 26-30 - 2014
- [j3]Wallace P. Lira, Ronnie Alves, Jean Marcel dos Reis Costa, Gustavo Pessin, Lilyan Galvao, Ana Claudia Cardoso, Cleidson R. B. de Souza:
A Visual-Analytics System for Railway Safety Management. IEEE Computer Graphics and Applications 34(5): 52-57 (2014) - [c15]Leandro Corrêa, Ronnie Alves, Fabiana Rodrigues de Góes, Cristian Chaparro, Lucinéia Thom:
A Pipeline for Functional and Visual Analytics of Microbial Genetic Networks. DyNaK 2014 - [c14]Fabiana Rodrigues de Góes, Ronnie Alves, Leandro Corrêa, Cristian Chaparro, Lucinéia Thom:
Towards an Ensemble Learning Strategy for Metagenomic Gene Prediction. BSB 2014: 17-24 - [c13]Leandro Corrêa, Ronnie Alves, Fabiana Rodrigues de Góes, Cristian Chaparro, Lucinéia Thom:
FUNN-MG: A Metagenomic Systems Biology Computational Framework. BSB 2014: 25-32 - [c12]Daniel Lichtnow, Ronnie Alves, Oscar Pastor, Verónica Burriel, José Palazzo Moreira de Oliveira:
BION2SEL: An Ontology-Based Approach for the Selection of Molecular Biology Databases. BSB 2014: 83-90 - 2013
- [c11]Ronnie Alves, Marcus Mendes, Diego Bonnato:
A Network-Based Meta-analysis Strategy for the Selection of Potential Gene Modules in Type 2 Diabetes. BSB 2013: 160-169 - 2012
- [c10]Ronnie Alves, Pedro Gabriel Ferreira, Joel Ribeiro, Orlando Belo:
Detecting Abnormal Patterns in Call Graphs Based on the Aggregation of Relevant Vertex Measures. ICDM 2012: 92-102 - [c9]Mariana Recamonde Mendoza, Guilherme C. da Fonseca, Guilherme L. de Morais, Ronnie Alves, Ana L. C. Bazzan, Rogerio Margis:
RFMirTarget: A Random Forest Classifier for Human miRNA Target Gene Prediction. BSB 2012: 97-108 - 2011
- [c8]Daniel Lichtnow, Ronnie Alves, José Palazzo Moreira de Oliveira, Ana M. Levin, Oscar Pastor, Ignacio Medina Castello, Joaquín Dopazo:
Using Papers Citations for Selecting the Best Genomic Databases. SCCC 2011: 33-42 - 2010
- [j2]Ronnie Alves, Domingo S. Rodríguez-Baena, Jesús S. Aguilar-Ruiz:
Gene association analysis: a survey of frequent pattern mining from gene expression data. Briefings Bioinform. 11(2): 210-224 (2010) - [p1]Ronnie Alves, Joel Ribeiro, Orlando Belo, Jiawei Han:
Ranking Gradients in Multi-Dimensional Spaces. Complex Data Warehousing and Knowledge Discovery for Advanced Retrieval Development 2010: 251-269
2000 – 2009
- 2009
- [j1]Ronnie Alves, Joel Ribeiro, Orlando Belo:
Mining significant change patterns in multidimensional spaces. Int. J. Bus. Intell. Data Min. 4(3/4): 219-241 (2009) - 2008
- [b1]Ronnie Alves:
Aggregation-based mining methods: from single to N-dimensional data analysis. University of Minho, Portugal, 2008 - 2007
- [c7]Ronnie Alves, Orlando Belo, Joel Ribeiro:
Mining Top-K Multidimensional Gradients. DaWaK 2007: 375-384 - [c6]Ronnie Alves, Orlando Belo, Fabio Costa:
Effective OLAP Mining of Evolving Data Marts. IDEAS 2007: 120-128 - 2006
- [c5]Ronnie Alves, Orlando Belo:
On the Computation of Maximal-Correlated Cuboids Cells. DaWaK 2006: 165-174 - [c4]Pedro Gabriel Ferreira, Ronnie Alves, Orlando Belo, Luís Cortesão:
Establishing Fraud Detection Patterns Based on Signatures. ICDM 2006: 526-538 - 2005
- [c3]Ronnie Alves, Orlando Belo:
Programming Relational Databases for Itemset Mining over Large Transactional Tables. EPIA 2005: 314-324 - [c2]Pedro Gabriel Ferreira, Ronnie Alves, Paulo J. Azevedo, Orlando Belo:
A Hybrid Method for Discovering Distance-Enhanced Inter-Transactional Rules. JISBD 2005: 131-138 - 2004
- [c1]Ronnie Alves, Orlando Belo:
Mining Clickstream-Based Data Cubes. ICEIS (1) 2004: 583-586
Coauthor Index
aka: Lucas Felipe Ferraro Cardoso
aka: Vitor Cirilo Araujo Santos
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