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Challenges and Experiences Extending the cBioPortal for Cancer Genomics to a Molecular Tumor Board Platform
Niklas Reimer, Philipp Unberath, Hauke Busch, Melanie Börries, Patrick Metzger, Arsenij Ustjanzew, Christopher Renner, Hans-Ulrich Prokosch, Jan Christoph
139 - 143
10.3233/SHTI210833
Research Article
Studies in Health Technology and Informatics
Volume 287: Applying the FAIR Principles to Accelerate Health Research in Europe in the Post COVID-19 Era
Abstract

In Molecular Tumor Boards (MTBs), therapy recommendations for cancer patients are discussed. To aid decision-making based on the patient’s molecular profile, the research platform cBioPortal was extended based on users’ requirements. Additionally, a comprehensive dockerized workflow was developed to support the deployment of cBioPortal and connected services. In this work, we present the challenges and experiences of nearly two years of implementing and deploying an MTB platform based on cBioPortal and compare those to findings of a previous study.

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