Published April 5, 2022
| Version 1.7.1
Software
Open
nipy/nipype: 1.7.1
Creators
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Esteban, Oscar1
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Markiewicz, Christopher J.2
- Burns, Christopher
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Goncalves, Mathias3
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Jarecka, Dorota3
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Ziegler, Erik4
- Berleant, Shoshana
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Ellis, David Gage5
- Pinsard, Basile
- Madison, Cindee
- Waskom, Michael1
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Notter, Michael Philipp6
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Clark, Daniel7
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Manhães-Savio, Alexandre8
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Clark, Dav9
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Jordan, Kesshi10
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Dayan, Michael11
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Halchenko, Yaroslav O.12
- Loney, Fred
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Salo, Taylor13
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Dewey, Blake E14
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Johnson, Hans15
- Bougacha, Salma16
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Keshavan, Anisha17
- Yvernault, Benjamin
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Hamalainen, Carlo
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Christian, Horea18
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Ćirić , Rastko2
- Dubois, Mathieu
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Joseph, Michael19
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Cipollini, Ben20
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Tilley II, Steven21
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Visconti di Oleggio Castello, Matteo22
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De La Vega, Alejandro23
- Wong, Jason24
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Kaczmarzyk, Jakub3
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Huntenburg, Julia M.25
- Clark, Michael G.26
- Benderoff, Erin27
- Erickson, Drew
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Dias, Maria de Fatima28
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Kent, James D.29
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Hanke, Michael30
- Giavasis, Steven31
- Moloney, Brendan
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Nichols, B. Nolan32
- Tungaraza, Rosalia
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Dell'Orco, Andrea33
- Frohlich, Caroline31
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Wassermann, Demian34
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de Hollander, Gilles35
- Koudoro, Serge36
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Eshaghi, Arman37
- Millman, Jarrod
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Mancini, Matteo37
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Close, Thomas38
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Nielson, Dylan M.39
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Varoquaux, Gael40
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Waller, Lea41
- Watanabe, Aimi
- Mordom, David
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Guillon, Jérémy42
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Robert-Fitzgerald, Timothy43
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Chetverikov, Andrey44
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Rokem, Ariel45
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Acland, Benjamin46
- Forbes, Jessica
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Markello, Ross47
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Gillman, Ashley48
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Bernardoni, Fabio49
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Kong, Xiang-Zhen50
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Geisler, Daniel49
- Salvatore, John
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Gramfort, Alexandre51
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Doll, Anna52
- Buchanan, Colin
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DuPre, Elizabeth47
- Liu, Siqi53
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Schaefer, Alexander54
- Kleesiek, Jens55
- Sikka, Sharad56
- Schwartz, Yannick
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Ghayoor, Ali5
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Lee, John A.57
- Mattfeld, Aaron
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Richie-Halford, Adam58
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Liem, Franz59
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Perez-Guevara, Martin Felipe60
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Heinsfeld, Anibal Sólon
- Haselgrove, Christian
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Durnez, Joke61
- Lampe, Leonie62
- Poldrack, Russell
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Glatard, Tristan63
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Baratz, Zvi64
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Tabas, Alejandro65
- Cumba, Chad
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Pérez-García, Fernando37
- Blair, Ross
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Iqbal, Shariq66
- Welch, David15
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Contier, Oliver67
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Triplett, William1
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Craddock, R. Cameron31
- Correa, Carlos
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Papadopoulos Orfanos, Dimitri68
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Stadler, Jörg69
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Warner, Joshua70
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Sisk, Lucinda M.71
- Falkiewicz, Marcel
- Sharp, Paul72
- Rothmei, Simon
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Kim, Sin73
- Weinstein, Alejandro
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Kahn, Ari E.74
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Kastman, Erik75
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Bottenhorn, Katherine13
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Grignard, Martin76
- Perkins, L. Nathan77
- Zhou, Dale
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Bielievtsov, Dmytro
- Ben-Zvi, Gal64
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Cooper, Gavin78
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Stojic, Hrvoje79
- Hui Qian, Tan
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Linkersdörfer, Janosch80
- Renfro, Mandy
- Hinds, Oliver
- Stanley, Olivia81
- Küttner, René
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Pauli, Wolfgang M.82
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Xie, Xihe83
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Glen, Daniel84
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Kimbler, Adam13
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Meyers, Benjamin85
- Tarbert, Claire
- Ginsburg, Daniel
- Haehn, Daniel
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Margulies, Daniel S.86
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Condamine, Eric87
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Ma, Feilong22
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Malone, Ian B.37
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Snoek, Lukas88
- Brett, Matthew
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Cieslak, Matthew89
- Hallquist, Michael
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Molina-Romero, Miguel90
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Bilgel, Murat91
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Lee, Nat
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Kuntke, Paul92
- Jalan, Raunak
- Inati, Souheil
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Gerhard, Stephan93
- Mathotaarachchi, Sulantha94
- Saase, Victor
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Van, Andrew46
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Steele, Christopher John95
- Ort, Eduard96
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Lerma-Usabiaga, Garikoitz2
- Schwabacher, Isaac
- Arias, Jaime
- Lai, Jeff
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Pellman, John97
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Huguet, Jordi98
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Junhao WEN74
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Leinweber, Katrin99
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Chawla, Kshitij100
- Weninger, Leon101
- Modat, Marc
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Mukhometzianov, Rinat102
- Harms, Robbert
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Andberg, Sami Kristian103
- Matsubara, K
- González Orozco, Abel A.104
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Routier, Alexandre105
- Marina, Ana
- Davison, Andrew
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Floren, Andrew106
- Park, Anne
- Cheung, Brian
- McDermottroe, Conor
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McNamee, Daniel107
- Shachnev, Dmitry
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Vogel, Dorian108
- Flandin, Guillaume
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Jones, Henry109
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Gonzalez, Ivan110
- Varada, Jan
- Schlamp, Kai
- Podranski, Kornelius
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Huang, Lijie111
- Noel, Maxime
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Pannetier, Nicolas112
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Numssen, Ole67
- Khanuja, Ranjeet
- Urchs, Sebastian
- Nickson, Thomas
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Huang, Lijie111
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Broderick, William66
- Tambini, Arielle
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Mihai, Paul Glad65
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Gorgolewski, Krzysztof J.1
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Ghosh, Satrajit113
- 1. Department of Psychology, Stanford University
- 2. Stanford University
- 3. MIT
- 4. Independent
- 5. The University of Iowa
- 6. The Laboratory for Investigative Neurophysiology (The LINE), Department of Radiology and Department of Clinical Neurosciences, Lausanne, Switzerland; Center for Biomedical Imaging (CIBM), Lausanne, Switzerland
- 7. Developer
- 8. Klinikum rechts der Isar, TUM. ACPySS
- 9. UC Berkeley
- 10. University of California, San Francisco
- 11. Mayo Clinic, Neurology, Rochester, MN, USA
- 12. Dartmouth College: Hanover, NH, United States
- 13. Florida International University
- 14. Department of Electrical and Computer Engineering, Johns Hopkins University
- 15. University of Iowa
- 16. Molecular Imaging Research Center, CEA, France
- 17. UC Berkeley - UCSF Graduate Program in Bioengineering
- 18. Institute for Biomedical Engineering, ETH and University of Zurich
- 19. The Centre for Addiction and Mental Health
- 20. UC San Diego
- 21. Holland Bloorview Kids Rehabilitation Hospital
- 22. Dartmouth College
- 23. University of Texas at Austin
- 24. Shattuck Lab, UCLA Brain Mapping Center
- 25. Research Group Neuroanatomy and Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
- 26. National Institutes of Health
- 27. Concordia University
- 28. CIBIT, UC
- 29. Neuroscience Program, University of Iowa
- 30. Otto-von-Guericke-University Magdeburg, Germany
- 31. Child Mind Institute
- 32. SRI International
- 33. Charitè Universitätsmedizin Berlin, Germany
- 34. Athena EPI, Inria Sophia-Antipolis
- 35. Vrije Universiteit, Amsterdam
- 36. Indiana University, IN, USA
- 37. University College London
- 38. University of Sydney
- 39. National Institute of Mental Health
- 40. INRIA
- 41. Charite Universitatsmedizin Berlin, Germany
- 42. ARAMIS LAB, Brain and Spine Institute (ICM), Paris, France.
- 43. Penn Statistics in Imaging and Visualization Endeavor, University of Pennsylvania
- 44. Donders Institute for Brain, Cognition and Behavior, Center for Cognitive Neuroimaging
- 45. The University of Washington eScience Institute
- 46. Washington University in St Louis
- 47. Montreal Neurological Institute and Hospital
- 48. Australian eHealth Research Centre, Commonwealth Scientific and Industrial Research Organisation; University of Queensland
- 49. Division of Psychological and Social Medicine and Developmental Neuroscience, Faculty of Medicine, Technische Universität Dresden, Dresden, Germany
- 50. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China; Max Planck Institute for Psycholinguistics, Nijmegen, the Netherlands
- 51. CNRS LTCI, Telecom ParisTech, Université Paris-Saclay
- 52. Department of Psychology, University of Bielefeld, Bielefeld, Germany.
- 53. The University of Sydney
- 54. National University Singapore
- 55. UniversityHospital Heidelberg, Germany
- 56. Nathan s Kline institute for psychiatric research
- 57. NIMH IRP
- 58. University of Washington
- 59. University of Zurich
- 60. Neurospin/Unicog/Inserm/CEA
- 61. Department of Psychology, Stanford University; Parietal, INRIA
- 62. MPI CBS Leipzig, Germany
- 63. 1 McGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montréal, 3801 University Street, WB-208, H3A 2B4, Québec, Canada. 2 University of Lyon, CNRS, INSERM, CREATIS., Villeurbanne, 7, avenue Jean Capelle, 69621, France.
- 64. Sagol School of Neuroscience, Tel Aviv University
- 65. Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.
- 66. Duke University
- 67. Max Planck Institute for Human Cognitive and Brain Sciences
- 68. CEA
- 69. Leibniz Institute for Neurobiology
- 70. Mayo Clinic
- 71. Yale University; New Haven, CT, United States
- 72. University of Illinois Urbana Champaign
- 73. Korea Advanced Institute of Science and Technology
- 74. University of Pennsylvania
- 75. Harvard University - Psychology
- 76. GIGA Institute
- 77. Boston University
- 78. University of Newcastle, Australia
- 79. Max Planck UCL Centre for Computational Psychiatry and Ageing Research, University College London
- 80. German Institute for International Educational Research
- 81. Dept of Medical Biophysics, Univeristy of Western Ontario
- 82. California Institute of Technology
- 83. Weill Cornell Medicine
- 84. NIMH, Scientific and Statistical Computing Core
- 85. University of Pittsburgh
- 86. Max Planck Research Group for Neuroanatomy & Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
- 87. CNRS, UMS3552 IRMaGe
- 88. University of Amsterdam
- 89. Department of Neuropsychiatry, University of Pennsylvania
- 90. Technical University Munich
- 91. National Institute on Aging, Baltimore, MD, USA
- 92. Insitiute and Polyclinc for Diagnostic and Interventional Neuroradiology, University Hospital Carl Gustav Carus, Dresden, Germany
- 93. Institute of Neuroinformatics, ETH/University of Zurich
- 94. Enigma Biomedical Group
- 95. MPI-CBS; McGill University
- 96. Vrije Universiteit Amsterdam
- 97. Child Mind Institute / Nathan Kline Institute
- 98. BarcelonaBeta Brain Research Center
- 99. TIB – Leibniz Information Centre for Science and Technology and University Library, Hannover, Germany
- 100. INRIA-Saclay, Team Parietal
- 101. Institute of Imaging & Computer Vision, RWTH Aachen University, Germany
- 102. University of Waterloo
- 103. University of Helsinki
- 104. Universidad de Guadalajara
- 105. ARAMIS Lab
- 106. The University of Texas at Austin
- 107. University of Cambridge
- 108. University of Applied Sciences and Arts Northwestern Switzerland
- 109. Stanford University and the University of Chicago
- 110. Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, MA, USA
- 111. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- 112. Medical Imaging & Biomarkers, Bioclinica, Newark, CA, USA.
- 113. MIT, HMS
Description
1.7.1 (April 05, 2022)
Bug-fix release in the 1.7.x series.
- FIX: Allow
ConvertScalarImageToRGBInputSpec.mask_file
to be"none"
(https://github.com/nipy/nipype/pull/3364) - FIX: Use a more robust strategy for detecting ANTs version (https://github.com/nipy/nipype/pull/3444)
- FIX: Retry renaming pkl(z) files on failure (https://github.com/nipy/nipype/pull/3404)
- FIX: Escape metacharacters when parsing dcm2niix outputs (https://github.com/nipy/nipype/pull/3417)
- FIX: Import error for nipype.interfaces.dipy.base (https://github.com/nipy/nipype/pull/3414)
- FIX:
ValueError
when usingResourceMonitor
(https://github.com/nipy/nipype/pull/3419) - FIX: Improve error handling of
CommandLine
interfaces (https://github.com/nipy/nipype/pull/3395) - FIX: Bugs in ApplyVDM interface (https://github.com/nipy/nipype/pull/3396)
- ENH: Add MRTrix3 interfaces (pared-down gh-3426) (https://github.com/nipy/nipype/pull/3445)
- ENH: Enable BidsDataGrabber to load saved layouts (https://github.com/nipy/nipype/pull/3421)
- ENH: ROBEX interface (https://github.com/nipy/nipype/pull/3443)
- ENH: Include several operations to ANTs's ImageMath interface, including ReplicateImage and ReplicateDisplacement (https://github.com/nipy/nipype/pull/3435)
- ENH: Add "GenericLabel" to antsRegistration interpolation option. (https://github.com/nipy/nipype/pull/3424)
- ENH: added Apply VDM functionality to FieldMap SPM interface (https://github.com/nipy/nipype/pull/3394)
- DOC: Side bar and main page fixes (https://github.com/nipy/nipype/pull/3397)
- TEST: Allow SVD columns to flip sign (https://github.com/nipy/nipype/pull/3405)
- MNT: rename dipy
move_streamlines
totransform_tracking_output
(https://github.com/nipy/nipype/pull/3412) - MNT: Test on Python 3.10 (https://github.com/nipy/nipype/pull/3438)
- MNT: Added ORCID iD (https://github.com/nipy/nipype/pull/3436)
- @fabioboh made their first contribution in https://github.com/nipy/nipype/pull/3394
- @qian587 made their first contribution in https://github.com/nipy/nipype/pull/3417
- @dmartindeblas made their first contribution in https://github.com/nipy/nipype/pull/3435
- @gaunab made their first contribution in https://github.com/nipy/nipype/pull/3421
- @ChristianHinge made their first contribution in https://github.com/nipy/nipype/pull/3364
Full Changelog: https://github.com/nipy/nipype/compare/1.7.0...1.7.1
Files
nipy/nipype-1.7.1.zip
Files
(3.7 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/nipy/nipype/tree/1.7.1 (URL)