Sciadonic acid: Difference between revisions

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{{draft topics|chemistry}}
{{chembox
|ImageFile = Sciadonic AcidSciadonic_Acid.svg
| IUPACName = (5''Z'',11''Z'',14''Z'')-Icosa-5,11,14-trienoic acid
| OtherNames = {{Unbulleted list
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| ChEBI = 82832
| PubChem = 445084
| Wikidata = Q27156395
| UNII = 69Y3H2QB5
| ChemSpiderID = 392828
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}}
 
'''Sciadonic acid''', also known as '''eicosatrienoic acid''', is a [[polyunsaturated fatty acid]].<ref>U.S. National Library of Medicine. (n.d.). Sciadonic acid. National Center for Biotechnology Information. PubChem Compound Database. Retrieved November 10, 2022, from https://pubchem.ncbi.nlm.nih.gov/compound/Sciadonic-acid </ref><ref>Sciadonic acid. ChemSpider. (n.d.). Retrieved November 10, 2022, from http://www.chemspider.com/Chemical-Structure.392828.html </ref> In regard to its structure, 5Z5''Z'',11Z11''Z'',14Z14''Z''-eicosa-5,11,14-trienoic acid (sciadonic acid) has 3 double bonds in the 5, 11, and 14 positions all of which are in the ''cis-'' conformationconfiguration. It is further classified as Δ<sup>5</sup>-fatty, and an [[omega-6]] acid due to the methylene interrupted double bond at carbon-5 and a final double bond 6 carbons away from the methylene tail of the [[hydrocarbon]]. Sciadonic acid is a naturally occurring compound and has been found to play a role as a plant metabolite, commonly found in pine nut oil.<ref>U.S. National Library of Medicine. (n.d.). Sciadonic acid. National Center for Biotechnology Information. PubChem Compound Database. Retrieved November 10, 2022, from https://pubchem.ncbi.nlm.nih.gov/compound/Sciadonic-acid</ref>. Furthermore, there have been propositions of several health applications for sciadonic acid as an [[anti-inflammatory agent]]. Sharing close structural similarity to [[arachidonic acid]], sciadonic acid acts as a replacement [[phospholipid]] in the corresponding [[biochemical pathways]].
 
== Etymology ==
The root behind the [[nomenclature]] of sciadonic acid comes from its high abundance in the seed, leaves, and wood oils of the plant species ''[[Sciadopitys verticillateverticillata]]''.<ref>Wolff,{{cite R.journal L.| (1999)doi = 10.1007/s11746-999-0102-7 | title = All-CIScis 5,11,14-20:3 acid: Podocarpic acid or sciadonic acid? | year = 1999 | last1 = Wolff | first1 = Robert L. | journal = Journal of the American Oil Chemists' Society, | volume = 76( | issue = 10), | pages = 1255–1256. https://doi.org/10.1007/s11746-999-0102-7| s2cid = 94058769 }}</ref>
 
== Synthetic Methodsmethods ==
The root behind the [[nomenclature]] of sciadonic acid comes from its high abundance in the seed, leaves, and wood oils of the plant species [[Sciadopitys verticillate]].<ref>Wolff, R. L. (1999). All-CIS 5,11,14-20:3 acid: Podocarpic acid or sciadonic acid? Journal of the American Oil Chemists' Society, 76(10), 1255–1256. https://doi.org/10.1007/s11746-999-0102-7 </ref>
There are a few methods reagarding the synthesis of sciadonic acid and other Δ5-fatty acids. One method is through [[desaturase]] enzyme complexes in which the [[biosynthesis]] of sciadonic acid has been achieved in the organism ''[[Anemone leveillei]]'' via two Δ<sup>5</sup>-desaturases, AL10 and AL21.<ref name="auto1">Sayanova{{cite O,journal Haslam| R,doi Venegas= Caleron10.1104/pp.107.098202 M,| Napiertitle JA.= Cloning and characterizationCharacterization of unusualUnusual fattyFatty acidAcid desaturasesDesaturases from ''Anemone leveillei'': identificationIdentification of an acylAcyl-coenzymeCoenzyme A C20 Delta5Δ5-desaturaseDesaturase responsibleResponsible for the synthesisSynthesis of sciadonicSciadonic acidAcid | year = 2007 | last1 = Sayanova | first1 = Olga | last2 = Haslam | first2 = Richard | last3 = Venegas Caleron | first3 = Monica | last4 = Napier | first4 = Johnathan A. | journal = Plant Physiol.Physiology 2007| volume = May;144( | issue = 1):455-67. doi:| 10.1104/pp.107.098202.pages Epub= 2007455–467 Mar| 23.pmid PMID:= 17384161; PMCID:| PMC1913799.pmc = 1913799 }}</ref> Both desaturases have shown success in the synthesis of sciadonic acid, however, the mechanisms show different substrate specificity. AL21 has broad substrate specificity and acts on both saturated (16:0 and 18:0) and unsaturated (20:2, ω-6) fatty acids.<ref name="auto1"/> In contrast AL10 has a much greater substrate specificity binding only to a C20 unsaturated fatty acid (20:2, n-6) When AL10 is co-expressed with a Δ<sup>9</sup>-elongase the biosynthesis of sciadonic acid is achieved in [[transgenic plants]]. A second synthetic method is achieved through an [[esterification]] reaction catalyzed via Lipozyme RM IM and pine nut oil. Lipase-catalyzed esterification reactions leading to the development of Δ<sup>5</sup>-fatty acids can be achieved in solvent-free conditions using water-[[jacketed vessel]].<ref>Kim,{{cite H.,journal Choi,| N.,doi Kim,= H10.-R5650/jos.,ess18136 Lee,| J.,title & Kim, I.-H. (2018).= Preparation of highHigh purityPurity Δ5-olefinicOlefinic acidsAcids from pinePine nutNut oilOil via repeatedRepeated lipaseLipase-catalyzedCatalyzed esterification.Esterification | year = 2018 | last1 = Kim | first1 = Heejin | last2 = Choi | first2 = Nakyung | last3 = Kim | first3 = Hak-Ryul | last4 = Lee | first4 = Junsoo | last5 = Kim | first5 = In-Hwan | journal = Journal of Oleo Science, | volume = 67( | issue = 11), | pages = 1435–1442. https://| pmid = 30404964 | doi.org/10.5650/jos.ess18136-access = free }}</ref>
 
== Synthetic Methods ==
 
There are a few methods reagarding the synthesis of sciadonic acid and other Δ5-fatty acids. One method is through [[desaturase]] enzyme complexes in which the [[biosynthesis]] of sciadonic acid has been achieved in the organism [[Anemone leveillei]] via two Δ<sup>5</sup>-desaturases, AL10 and AL21.<ref name="auto1">Sayanova O, Haslam R, Venegas Caleron M, Napier JA. Cloning and characterization of unusual fatty acid desaturases from Anemone leveillei: identification of an acyl-coenzyme A C20 Delta5-desaturase responsible for the synthesis of sciadonic acid. Plant Physiol. 2007 May;144(1):455-67. doi: 10.1104/pp.107.098202. Epub 2007 Mar 23. PMID: 17384161; PMCID: PMC1913799.</ref> Both desaturases have shown success in the synthesis of sciadonic acid, however, the mechanisms show different substrate specificity. AL21 has broad substrate specificity and acts on both saturated (16:0 and 18:0) and unsaturated (20:2, ω-6) fatty acids.<ref name="auto1"/> In contrast AL10 has a much greater substrate specificity binding only to a C20 unsaturated fatty acid (20:2, n-6) When AL10 is co-expressed with a Δ<sup>9</sup>-elongase the biosynthesis of sciadonic acid is achieved in [[transgenic plants]]. A second synthetic method is achieved through an [[esterification]] reaction catalyzed via Lipozyme RM IM and pine nut oil. Lipase-catalyzed esterification reactions leading to the development of Δ<sup>5</sup>-fatty acids can be achieved in solvent-free conditions using water-[[jacketed vessel]].<ref>Kim, H., Choi, N., Kim, H.-R., Lee, J., & Kim, I.-H. (2018). Preparation of high purity Δ5-olefinic acids from pine nut oil via repeated lipase-catalyzed esterification. Journal of Oleo Science, 67(11), 1435–1442. https://doi.org/10.5650/jos.ess18136 </ref>
 
== Phylogenetic significance in gymnosperms ==
Sciadonic acid and several other Δ<sup>5</sup>-olefinic acids are found to be relatively abundant in [[gymnospermsgymnosperm]]s. ''[[Setaria verticillata]]'' seeds and their fatty acid compositions allow for distinction between different Coniferophytes such as species from families such as [[Cupressaceae]] and [[Taxodiaceae]].<ref>Wolff,{{cite R.journal L.| (1999)doi = 10.1007/s11746-999-0195-z | title = The phylogenetic significance of sciadonic (allAll-cis 5,11,14-20:3) acid in gymnosperms and its quantitative significance in land plants | year = 1999 | last1 = Wolff | first1 = Robert L. | journal = Journal of the American Oil Chemists' Society, | volume = 76( | issue = 12), | pages = 1515–1516. https://doi.org/10.1007/s11746-999-0195-z| s2cid = 84666529 }}</ref><ref>73:765–771 (1996). 14. Wolff, R.L., L.G. Deluc, A.M. Marpeau, and B. Comps, Chemotaxonomic Differentiation of Conifer Families and Genera Based on the Seed Oil Fatty Acid Compositions: Multivariate Analyses, Trees 12:57–65 (1997)</ref><ref>Wolff, R.L., Clarification on the Taxonomic Position of Sciadopitys verticillata Among Coniferophytes Based on the Seed Oil Fatty Acid Compositions, J. Am. Oil Chem. Soc. 75:757–758 (1998)</ref>. Sciadonic acid is a distinctive fatty acid that shows presence in the oils of seeds, leaves, and woods of [[conifersconifer]]s. Indicating that plant families can be characterized by the fatty acid composition of their seed, leaves, and wood oils.
 
Sciadonic acid and several other Δ<sup>5</sup>-olefinic acids are found to be relatively abundant in [[gymnosperms]]. [[Setaria verticillata]] seeds and their fatty acid compositions allow for distinction between different Coniferophytes such as species from families such as [[Cupressaceae]] and [[Taxodiaceae]].<ref>Wolff, R. L. (1999). The phylogenetic significance of sciadonic (all-cis 5,11,14-20:3) acid in gymnosperms and its quantitative significance in land plants. Journal of the American Oil Chemists' Society, 76(12), 1515–1516. https://doi.org/10.1007/s11746-999-0195-z </ref><ref>73:765–771 (1996). 14. Wolff, R.L., L.G. Deluc, A.M. Marpeau, and B. Comps, Chemotaxonomic Differentiation of Conifer Families and Genera Based on the Seed Oil Fatty Acid Compositions: Multivariate Analyses, Trees 12:57–65 (1997)</ref><ref>Wolff, R.L., Clarification on the Taxonomic Position of Sciadopitys verticillata Among Coniferophytes Based on the Seed Oil Fatty Acid Compositions, J. Am. Oil Chem. Soc. 75:757–758 (1998)</ref>. Sciadonic acid is a distinctive fatty acid that shows presence in the oils of seeds, leaves, and woods of [[conifers]]. Indicating that plant families can be characterized by the fatty acid composition of their seed, leaves, and wood oils.
 
== Health implications ==
[[EicosanoidsEicosanoid]]s and metabolites found to be biologically active have correlated to tumor progression by several mechanisms such as interruption of [[cell signaling]]. In humans, [[fatty acid desaturasesdesaturase]]s, FADS 1,2 and 3 are [[enzyme]] coding genes found in [[chromosome 11q13]], in which alterations can be attributed to several types of [[cancerscancer]]s such as breast, ovarian and cervical cancer. In particular, the FADS2 enzyme, responsible for Δ<sup>6</sup> desaturation is no longer functional.<ref name="auto">Park{{cite journal | doi = 10.1016/j.plefa.2018.05.002 | title = A rare eicosanoid precursor analogue, sciadonic acid (5Z,11Z,14Z–20:3), detected in vivo in hormone positive breast cancer tissue | year = 2018 | last1 = Park | first1 = H. G., | last2 = Zhang, | first2 = J. Y., | last3 = Foster, | first3 = C., | last4 = Sudilovsky, | first4 = D., | last5 = Schwed, | first5 = D. A., | last6 = Mecenas, | first6 = J., | last7 = Devapatla, | first7 = S., | last8 = Lawrence, | first8 = P., | last9 = Kothapalli, | first9 = K. S. D., &| last10 = Brenna, | first10 = J. T. (2018).| Ajournal rare= eicosanoid precursor analogueProstaglandins, sciadonicLeukotrienes acidand (5Z,11z,14Z–20:3),Essential detectedFatty inAcids vivo| involume hormone= positive134 breast| cancerpages tissue.= Prostaglandins,1–6 Leukotrienes| andpmid Essential= Fatty29886893 Acids,| 134,pmc 1–6.= https://doi.org/10.1016/j.plefa.2018.05.0025999340 }}</ref> In healthy tissues sciadonic acid is usually not within detectable concentrations. howeverHowever, detectable concentrations have been found in human breast cancer tissues<ref detectablename="auto" concentrations/> haveand beenin found.pooled Sciadonichuman acidsblood structuralplasma.<ref>{{Cite similarityjournal has|last1=Menzel shown|first1=Jan potentialPhilipp as|last2=Young a|first2=Reuben substituteS. forE. [[arachidonic|last3=Benfield acid]]|first3=Aurélie inH. cellular|last4=Scott [[phospholipid]]|first4=Julia poolsS. in|last5=Wongsomboon the|first5=Puttandon signaling|last6=Cudlman pathways.<ref|first6=Lukáš name|last7="auto"/><ref>Chen,Cvačka S.-J.,|first7=Josef Huang,|last8=Butler |first8=Lisa WM.-C., Yang,|last9=Henriques |first9=Sónia T.-T., Lu,|last10=Poad J.-H., & Chuang,|first10=Berwyck L.-T. (2012)J. Incorporation|last11=Blanksby of|first11=Stephen sciadonicJ. acid|date=2023-07-04 into cellular phospholipids reduces pro|title=Ozone-inflammatoryenabled mediatorsfatty inacid murinediscovery [[macrophagesreveals throughunexpected NF-ΚBdiversity andin MAPKthe signalinghuman pathways.lipidome Food|journal=Nature andCommunications Chemical|language=en Toxicology,|volume=14 50(10),|issue=1 3687–3695.|pages=3940 https://|doi.org/=10.10161038/js41467-023-39617-9 |pmid=37402773 |issn=2041-1723|pmc=10319862 |bibcode=2023NatCo.fct.201214.07.0573940M }}</ref> Due to structural similarity, Sciadonic acid has shown potential as a substitute for [[arachidonic acid]] in cellular [[phospholipid]] pools in signaling pathways.<ref name="auto"/> In keratinocytes, sciadonic acids release from the cellular membrane phospholipid pool reduces levels of pro-inflammatory arachidonic acid and the corresponding pro-inflammatory down-stream mediator [[Prostaglandin E2|prostaglandin E2E<sub>2</sub>]].<ref name="auto2">Chen,{{cite S.-J.,journal Huang,| W.-C.,doi Yang,= T10.-T1016/j., Lu, Jfct.-H2012.07.,057 &| Chuang,title L.-T. (2012).= Incorporation of sciadonic acid into cellular phospholipids reduces pro-inflammatory mediators in murine macrophages through NF-ΚBκB and MAPK signaling pathways. | year = 2012 | last1 = Chen | first1 = Szu-Jung | last2 = Huang | first2 = Wen-Cheng | last3 = Yang | first3 = Tzu-Ting | last4 = Lu | first4 = Jui-Hua | last5 = Chuang | first5 = Lu-Te | journal = Food and Chemical Toxicology, | volume = 50( | issue = 10), | pages = 3687–3695. https://doi.org/10.1016/j.fct.2012.07.057| pmid = 22889893 }}</ref> Reduction of pro-inflammatory mediator molecules is also occurs in murine macrophages, regulating the activation of NF-κΒ and MAPK pathways.<ref name="auto2"/>
 
[[Eicosanoids]] and metabolites found to be biologically active have correlated to tumor progression by several mechanisms such as interruption of [[cell signaling]]. In humans, [[fatty acid desaturases]], FADS 1,2 and 3 are [[enzyme]] coding genes found in [[chromosome 11q13]], in which alterations can be attributed to several types of [[cancers]] such as breast, ovarian and cervical cancer. In particular, the FADS2 enzyme, responsible for Δ<sup>6</sup> desaturation is no longer functional.<ref name="auto">Park, H. G., Zhang, J. Y., Foster, C., Sudilovsky, D., Schwed, D. A., Mecenas, J., Devapatla, S., Lawrence, P., Kothapalli, K. S. D., & Brenna, J. T. (2018). A rare eicosanoid precursor analogue, sciadonic acid (5Z,11z,14Z–20:3), detected in vivo in hormone positive breast cancer tissue. Prostaglandins, Leukotrienes and Essential Fatty Acids, 134, 1–6. https://doi.org/10.1016/j.plefa.2018.05.002 </ref> In healthy tissues sciadonic acid is not within detectable concentrations however in human breast cancer tissues detectable concentrations have been found. Sciadonic acids structural similarity has shown potential as a substitute for [[arachidonic acid]] in cellular [[phospholipid]] pools in the signaling pathways.<ref name="auto"/><ref>Chen, S.-J., Huang, W.-C., Yang, T.-T., Lu, J.-H., & Chuang, L.-T. (2012). Incorporation of sciadonic acid into cellular phospholipids reduces pro-inflammatory mediators in murine [[macrophages through NF-ΚB and MAPK signaling pathways. Food and Chemical Toxicology, 50(10), 3687–3695. https://doi.org/10.1016/j.fct.2012.07.057 </ref>In keratinocytes, sciadonic acids release from the cellular membrane phospholipid pool reduces levels of pro-inflammatory arachidonic acid and the corresponding pro-inflammatory down-stream mediator [[prostaglandin E2]].<ref name="auto2">Chen, S.-J., Huang, W.-C., Yang, T.-T., Lu, J.-H., & Chuang, L.-T. (2012). Incorporation of sciadonic acid into cellular phospholipids reduces pro-inflammatory mediators in murine macrophages through NF-ΚB and MAPK signaling pathways. Food and Chemical Toxicology, 50(10), 3687–3695. https://doi.org/10.1016/j.fct.2012.07.057 </ref> Reduction of pro-inflammatory mediator molecules is also occurs in murine macrophages, regulating the activation of NF-κΒ and MAPK pathways.<ref name="auto2"/>
 
== References ==
{{reflist}}
 
{{Fatty acids}}
 
[[Category:Fatty acids]]
[[Category:Polyunsaturated compounds]]