Zwittermicin A: Difference between revisions
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{{Orphan|date=February 2009}} |
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|ImageFile= Zwastereo.png |
|ImageFile= Zwastereo.png |
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|ImageSize= 300px |
|ImageSize= 300px |
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|SystematicName = (2''S'',3''R'',4''R'',5''R'',7''R'',8''S'')-4,8-Diamino-''N''-[(2''S'')-1-amino-3-(carbamoylamino)-1-oxopropan-2-yl]-2,3,5,7,9-pentahydroxynonanamide |
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2,3,5,7,9-pentahydroxynonanamide |
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| Section1 = {{Chembox Identifiers |
| Section1 = {{Chembox Identifiers |
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| CASNo_Ref = {{cascite|correct|??}} |
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| CASNo= 155547-95-8 |
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| UNII_Ref = {{fdacite|correct|FDA}} |
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| UNII = J5KML2XGC6 |
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| ChEMBL_Ref = {{ebicite|changed|EBI}} |
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| ChEMBL = 1093072 |
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| PubChem = 44474866 |
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| ChEBI=80056 |
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| KEGG = C15726 |
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| ChemSpiderID_Ref = {{chemspidercite|changed|chemspider}} |
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| ChemSpiderID = 24669086 |
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| SMILES = C([C@H]([C@H](CO)N)O)[C@H]([C@H]([C@H]([C@@H](C(=O)N[C@@H](CNC(=O)N)C(=O)N)O)O)N)O |
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| InChI = 1/C13H28N6O8/c14-4(3-20)6(21)1-7(22)8(15)9(23)10(24)12(26)19-5(11(16)25)2-18-13(17)27/h4-10,20-24H,1-3,14-15H2,(H2,16,25)(H,19,26)(H3,17,18,27)/t4-,5-,6+,7+,8+,9+,10-/m0/s1 |
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| InChIKey = FYIPKJHNWFVEIR-VTAUKWRXBI |
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| StdInChI_Ref = {{stdinchicite|changed|chemspider}} |
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| StdInChI = 1S/C13H28N6O8/c14-4(3-20)6(21)1-7(22)8(15)9(23)10(24)12(26)19-5(11(16)25)2-18-13(17)27/h4-10,20-24H,1-3,14-15H2,(H2,16,25)(H,19,26)(H3,17,18,27)/t4-,5-,6+,7+,8+,9+,10-/m0/s1 |
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| StdInChIKey_Ref = {{stdinchicite|changed|chemspider}} |
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| StdInChIKey = FYIPKJHNWFVEIR-VTAUKWRXSA-N |
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| Section2 = {{Chembox Properties |
| Section2 = {{Chembox Properties |
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'''Zwittermicin A''' is an antibiotic that has been identified from the bacterium [[Bacillus cereus]] UW85.<ref name="Zwittermicin">Haiyin, He (April, 1994) "Zwittermicin A, an Antifungal and Plant Protection Agent from Bacillus cereus", Tetrahedron Letters 35 (16) 2499-2502 doi=10.1016/S0040-4039(00)77154-1</ref> |
'''Zwittermicin A''' is an antibiotic that has been identified from the bacterium [[Bacillus cereus]] UW85.<ref name="Zwittermicin">Haiyin, He (April, 1994) "Zwittermicin A, an Antifungal and Plant Protection Agent from Bacillus cereus", Tetrahedron Letters 35 (16) 2499-2502 doi=10.1016/S0040-4039(00)77154-1</ref> It is a molecule of interest to agricultural industry because it has the potential to suppress plant disease due to its broad spectrum activity against certain gram positive and gram negative [[prokaryotic]] micro-organisms. The molecule is also of interest from a metabolic perspective because it represents a new structural class of antibiotic and suggests a crossover between [[polyketide]] and non-ribosomal peptide biosynthetic pathways. Zwittermicin A is linear aminopolyol.<ref name="Synthesis">{{cite journal |vauthors=Rogers EW, Molinski TF |title=Asymmetric synthesis of diastereomeric diaminoheptanetetraols. A proposal for the configuration of (+)-zwittermicin a |journal=Org. Lett. |volume=9 |issue=3 |pages=437–40 |date=February 2007 |pmid=17249781 |doi=10.1021/ol062804a |pmc=2729442}}</ref> |
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==Biosynthesis== |
==Biosynthesis== |
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Zwittermycin A [[biosynthesis]] is a hybrid of polyketide and non-ribosomal peptide synthetic pathways. Most likely, all of the synthases are located on one megasynthase much like a type I |
Zwittermycin A [[biosynthesis]] is a hybrid of polyketide and non-ribosomal peptide synthetic pathways. Most likely, all of the synthases are located on one megasynthase much like a type I fatty acid synthase. Based on mutant studies, the biosynthetic cluster involved in zwittermicin production has been identified and the pathway has been proposed. The [[gene]]s responsible for the production of zwittermicin A are located on a 16 kb cluster containing nine orfs and a self resistant gene zmaR, a [[gene]] that encodes an [[acylation]] [[enzyme]] that deactivate zwittermicin A.<ref name="Cluster">{{cite journal |vauthors=Stohl EA, Milner JL, Handelsman J |title=Zwittermicin A biosynthetic cluster |journal=Gene |volume=237 |issue=2 |pages=403–11 |date=September 1999 |pmid=10521664 |doi= 10.1016/S0378-1119(99)00315-7}}</ref> The hybrid [[synthase]] used in zwittermicin A production utilizes modified extender units such as hydroxymalonyl-ACP, aminomalonyl-ACP and [[2,3-diaminopropionate]]. Therefore, many of the genes in the biosynthetic cluster encode for [[enzyme]]s responsible for the synthesis of these extender units used in the hybrid synthase. For example, orf5 encodes ZWA5A, an enzyme that is responsible for the PLP mediated amination that converts L-serine to 2,3-diaminopropionate. It has also been shown that orf5, orf7, orf4 and orf6 participate in the biosynthesis of aminomalonyl-ACP and orf3, orf2 and orf1 synthesize hydroxymalonyl-ACP.<ref name="Related Genes">{{cite journal |vauthors=Zhao C, Luo Y, Song C, etal |title=Identification of three Zwittermicin A biosynthesis-related genes from Bacillus thuringiensis subsp. kurstaki strain YBT-1520 |journal=Arch. Microbiol. |volume=187 |issue=4 |pages=313–9 |date=April 2007 |pmid=17225146 |doi=10.1007/s00203-006-0196-3 |s2cid=24773281 }}</ref> |
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[[Image:Zwabreakdown.png|400px|left|thumb|Units used in Zwittermicin A Production]] |
[[Image:Zwabreakdown.png|400px|left|thumb|Units used in Zwittermicin A Production]] |
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[[Image:Diaminosynthesis.png|400px|right|thumb|Biosynthesis of L-2,3 Diaminopropionate]]<br /> |
[[Image:Diaminosynthesis.png|400px|right|thumb|Biosynthesis of L-2,3 Diaminopropionate]]<br /> |
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[[Image:Zwagenes.png|800px|center|Gene organization of the Zwittermicin A biosynthetic cluster.]]<br />Gene organization of the Zwittermicin A biosynthetic cluster.<br /> |
[[Image:Zwagenes.png|800px|center|Gene organization of the Zwittermicin A biosynthetic cluster.]]<br />Gene organization of the Zwittermicin A biosynthetic cluster.<br /> |
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<br />Genes encoding for the seven component hybrid synthase responsible for the assembly of the backbone is likely located on the largest gene, orf8. Assembly begins by the activation of a serine residue. This is done by tethering the amino acid to a peptidal carrier protein via a non-ribosomal peptide |
<br />Genes encoding for the seven component hybrid synthase responsible for the assembly of the backbone is likely located on the largest gene, orf8. Assembly begins by the activation of a serine residue. This is done by tethering the amino acid to a peptidal carrier protein via a non-ribosomal peptide synthetase. Subsequently elongation of an activated malonyl unit covalently attached to an acyl carrier protein by a ketosynthase occurs giving the five carbon unit. The next two elongation steps proceed in a similar manner using aminomalonyl and hydroxymalonyl units from a second and third ketosynthase. Finally, condensation of 2,3-diaminopropionate with the carried molecule by a second nonribosomalpeptide synthase produces the zwittermicin A backbone. Attack of ammonia via an amidotransferase enzyme releases the carrier protein. The last step involves a carbomyltransferase enzyme that carbamolates the released molecule giving the final product.<ref name="Genetics">{{cite journal |vauthors=Emmert EA, Klimowicz AK, Thomas MG, Handelsman J |title=Genetics of zwittermicin a production by Bacillus cereus |journal=Appl. Environ. Microbiol. |volume=70 |issue=1 |pages=104–13 |date=January 2004 |pmid=14711631 |pmc=321298 |doi= 10.1128/AEM.70.1.104-113.2004}}</ref><br /> |
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[[Image:Zwittermicinsynthesis.gif|1000px|center|thumb|Zwittermicin A Biosynthesis]] |
[[Image:Zwittermicinsynthesis.gif|1000px|center|thumb|Zwittermicin A Biosynthesis]] |
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