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Open Access Publications from the University of California

Scholarly Works (60 results)

  • Article
Research Reports (2015)

Policymakers typically favor renewable fuel mandates over taxes and cap and trade programs to reduce greenhouse gas emissions from the transportation sector. Because of delays in the development of commercially viable renewable fuels and important constraints on their use and distribution, fuel mandates are susceptible to sudden increases in compliance costs as policies become more stringent. The authors study the effects and efficiency of two fuel mandates, a renewable share mandate and a carbon intensity standard, as well as the effects of two cost containment provisions, a credit window price and a renewable fuel multiplier. The authors show using a numerical model of the US fuel market that when the mandates are set optimally, they can lead to modest efficiency gains over business as usual; however, when combined optimally with a credit window price, the efficiency of both mandates increases substantially. In contrast, optimally combining a mandate with a renewable fuel multiplier that indirectly relaxes the standard results in only modest efficiency gains over the optimal mandates alone.

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    Cover page: Mandating green: On the Design of Renewable Fuel Policies and Cost Containment Mechanisms
    • Article
    • Peer Reviewed
    LBL Publications (2015)
    We propose a new method for the determination of reactivity ratios based on a nonterminal model of copolymerization kinetics. Within the context of this model, we derive simple, reactivity-ratio-dependent expressions whose solution relies solely on monomer consumption information spanning the full range of conversion. Utilizing this method, reactivity ratios are obtained for the aluminum chelate-catalyzed copolymerization of phenyl glycidyl ether and allyl glycidyl ether (rPGE = 1.56 ± 0.01 and rAGE = 0.66 ± 0.03) with monomer consumption monitored by in situ 1H NMR spectroscopy. Additionally, this approach is applied to experimental data extracted from the literature for other copolymerization systems encompassing a range of monomer types (styrenics, isoprene, lactones, lactide, and other cyclic ethers) and polymerization type (anionic, coordination, and zwitterionic) to obtain reactivity ratios under the mechanistic assumption of nonterminal model copolymerization kinetics. We present the nonterminal model of copolymerization as the first method that should be utilized before more complex frameworks (e.g., terminal or penultimate model of chain copolymerization) are used to understand copolymerization kinetics.
      Cover page: Simple and Accurate Determination of Reactivity Ratios Using a Nonterminal Model of Chain Copolymerization
      • Article
      • Peer Reviewed
      UC Davis Previously Published Works (2019)
      Infectious abortions of goats in Argentina are mainly associated with brucellosis and toxoplasmosis. In this paper, we describe an abortion outbreak in goats caused by Chlamydia abortus. Seventy out of 400 goats aborted. Placental smears stained with modified Ziehl-Neelsen stain showed many chlamydia-like bodies within trophoblasts. One stillborn fetus was necropsied and the placenta was examined. No gross lesions were seen in the fetus, but the inter-cotyledonary areas of the placenta were thickened and covered by fibrino-suppurative exudate. The most consistent microscopic finding was found in the placenta and consisted of fibrinoid necrotic vasculitis, with mixed inflammatory infiltration in the tunica media. Immunohistochemistry of the placenta was positive for Chlamydia spp. The results of polymerase chain reaction targeting 23S rRNA gene performed on placenta were positive for Chlamydia spp. An analysis of 417 amplified nucleotide sequences revealed 99% identity to those of C. abortus pm225 (GenBank AJ005617) and pm112 (GenBank AJ005613) isolates. To the best of our knowledge, this is the first report of abortion associated with C. abortus in Argentina.
        Cover page: First report of caprine abortions due to Chlamydia abortus in Argentina
        • Article
        • Peer Reviewed
        UCLA Previously Published Works (2017)

        Key points

        Following substantial bleaching of the visual pigment, the desensitization of the rod photovoltage is not as substantial as the desensitization of the rod outer segment photocurrent. The block of cation conductances during the internal dialysis of Cs+ further desensitizes the photovoltage thereby eliminating its difference in desensitization with the rod outer segment photocurrent. Bleached visual pigment produced an acceleration of the rod photovoltage with respect to the outer segment photocurrent, which is eliminated upon internal dialysis of Cs+ .

        Abstract

        A majority of our visual experience occurs during the day when a substantial fraction of the visual pigment in our photoreceptor cells is bleached. Under these conditions it is widely believed that rods are saturated and do not contribute substantially to downstream signalling. However, behavioural experiments on subjects with only rod function reveals that these individuals unexpectedly retain substantial vision in daylight. We sought to understand this discrepancy by characterizing the sensitivity of rod photoresponses following exposure to bright bleaching light. Measurements of the rod outer segment photocurrent in transgenic mice, which have only rod function, revealed the well-studied reduction in the sensitivity of rod photoresponses following pigment bleaching. However, membrane voltage measurements showed that the desensitization of the photovoltage was considerably less than that of the outer segment photocurrent following equivalent pigment bleaching. This discrepancy was largely eliminated during the blockade of cation channels due to the internal dialysis of Cs+ , which increased the bleach-induced desensitization of the photovoltage and slowed its temporal characteristics. Thus, sensitization of the photovoltage by rod inner segment conductances appears to extend the operating range of rod phototransduction following pigment bleaching.
          Cover page: Voltage‐sensitive conductances increase the sensitivity of rod photoresponses following pigment bleaching
          • Article
          • Peer Reviewed
          Dermatology Online Journal, Volume 23, Issue 7 (2017)

          Soil and freshwater-dwelling amoebae may opportunistically infect the skin and evoke a granulomatous dermatitis that camouflages their underlying morphology. Amoebic infestations are incredibly rare in the U.S., predominantly occurring in the young, elderly, and immunocompromised. Sadly, because diagnosis is difficult and unsuspected, most cases are diagnosed at autopsy. The following case is of a healthy 84-year-old man with a non-healing nodulo-ulcerative cutaneous lesion on his left forearm that appeared following a gardening injury. Lesional punch biopsies repeatedly showed non-specific granulomatous inflammation with no pathogens evident histologically or by culture. Histopathologic diagnosis was made five months after initial presentation via identification of amoebic trophozoite forms in tissue from a large excisional specimen. Anti-amoebic therapy was initiated immediately. The patient experienced mental status changes three days following lesion excision, with evidence of a cystic mass in the left medial parieto-occipital lobe by CT. Both intraoperative brain biopsies and cutaneous tissue samples tested positive for Balamuthia mandrillaris by indirect immunofluorescent antibody assay performed at the Centers for Disease Control. The patient achieved a full recovery on a triple antibiotic regimen. Clinical suspicion and thorough histopathologic analysis may determine the difference between survival and death for a patient presenting with a treatment-refractory localized granulomatous lesion.

            Cover page: Cutaneous Balamuthia mandrillaris infection as a precursor to Balamuthia amoebic encephalitis (BAE) in a healthy 84-year-old CalifornianCreative Commons 'BY-NC-ND' version 4.0 license
            • Article
            • Peer Reviewed
            UC San Diego Previously Published Works (2019)
            Gastrointestinal (GI) problems give rise to 10 percent of initial patient visits to their physician. Although blockages and infections are easy to diagnose, more than half of GI disorders involve abnormal functioning of the GI tract, where diagnosis entails subjective symptom-based questionnaires or objective but invasive, intermittent procedures in specialized centers. Although common procedures capture motor aspects of gastric function, which do not correlate with symptoms or treatment response, recent findings with invasive electrical recordings show that spatiotemporal patterns of the gastric slow wave are associated with diagnosis, symptoms, and treatment response. We here consider developing non-invasive approaches to extract this information. Using CT scans from human subjects, we simulate normative and disordered gastric surface electrical activity along with associated abdominal activity. We employ Bayesian inference to solve the ill-posed inverse problem of estimating gastric surface activity from cutaneous recordings. We utilize a prior distribution on the spatiotemporal activity pertaining to sparsity in the number of wavefronts on the stomach surface, and smooth evolution of these wavefronts across time. We implement an efficient procedure to construct the Bayes optimal estimate and demonstrate its superiority compared to other commonly used inverse methods, for both normal and disordered gastric activity. Region-specific wave direction information is calculated and consistent with the simulated normative and disordered cases. We apply these methods to cutaneous multi-electrode recordings of two human subjects with the same clinical description of motor function, but different diagnosis of underlying cause. Our method finds statistically significant wave propagation in all stomach regions for both subjects, anterograde activity throughout for the subject with diabetic gastroparesis, and retrograde activity in some regions for the subject with idiopathic gastroparesis. These findings provide a further step towards towards non-invasive phenotyping of gastric function and indicate the long-term potential for enabling population health opportunities with objective GI assessment.
              Cover page: Bayesian inverse methods for spatiotemporal characterization of gastric electrical activity from cutaneous multi-electrode recordings
              • Article
              • Peer Reviewed
              UC San Francisco Previously Published Works (2016)
              A 3-year-old girl presented for routine closure of her tracheostomy site. She was intubated easily for the procedure, and the wound was closed with a drain in place. In recovery, the mother noticed fullness in the patient's submandibular region, and on examination, the girl had subcutaneous emphysema in the neck bilaterally. She returned to the operating room for exploration, and air was released from the surgical site. The wound was again closed with a drain in place, and the patient was extubated uneventfully. After arriving to the pediatric intensive care unit for monitoring, the patient acutely developed respiratory distress and was found to have pneumomediastinum and pneumothorax and was emergently intubated. She was observed closely, and the following day, the pneumothorax improved, and she successfully extubated without further complication.
                Creative Commons 'BY-NC-ND' version 4.0 license
                • Article
                • Peer Reviewed
                UC Santa Barbara Previously Published Works (2018)
                  Cover page: Ion Transport in Dynamic Polymer Networks Based on Metal-Ligand Coordination: Effect of Cross-Linker Concentration
                  • Article
                  • Peer Reviewed
                  UC Davis Previously Published Works (2021)

                  Background

                  Mycosis fungoides (MF) is a cutaneous lymphoma; most patients present with early, skin-limited disease and are managed by dermatologists.

                  Objective

                  The purpose of this study was to systematically review and assess the evidence on topical treatments for early-stage (IA, IB, IIA) MF.

                  Methods

                  We performed a literature search via MEDLINE, Embase, Web of Science, and Cochrane databases. Grading Recommendations Assessment, Development and Evaluation (GRADE) criteria were used to assess the certainty of the data.

                  Results

                  Two searches yielded 1252 references; 26 met the inclusion criteria and included literature on nitrogen mustard, retinoids, corticosteroids, carmustine, fluorouracil, methotrexate-laurocapram, hexadecylphosphocholine, peldesine, ingenol mebutate, topical methotrexate with oxygen flow-assisted LP3 carrier, and resiquimod. Most studies were single intervention, observational series. Nitrogen mustard, with the most published reports, was effective with 12%-82% early-stage MF patients (total n > 1000) achieving complete remission (CR) (low certainty evidence). Clinical CR was achieved among 10%-60% treated with topical retinoids (low certainty evidence). Two moderate-sized retrospective case series on topical steroids had 18%-63% CR (low certainty evidence). Only single studies were available for the other therapies.

                  Conclusions

                  For most outcomes of interest, the GRADE certainty for topical therapies for early-stage MF was low. Further randomized controlled trials and inclusion of quality of life indicators are needed.
                    Cover page: Topical treatments for early-stage mycosis fungoides using Grading Recommendations Assessment, Development and Evaluation (GRADE) criteria: A systematic review
                    • Article
                    • Peer Reviewed
                    UC Santa Barbara Previously Published Works (2018)
                      Cover page: Decoupling Bulk Mechanics and Mono- and Multivalent Ion Transport in Polymers Based on Metal�Ligand Coordination
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