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The RNA alignment problem is to align two RNA sequences A and B with given secondary structure for each RNA such that a score based on sequence and structure ...
Here, we present a constraint approach for alignment of structures in the even more general class of structures with unlimited complexity. Our central ...
Here, we present a constraint approach for alignment of structures in the even more general class of structures with unlimited complexity. Our central ...
Here, we present a constraint approach for alignment of structures in the even more general class of unlimited structures. Our central contribution is a new RNA ...
Alignment of RNA with. Structures of Unlimited Complexity. Alessandro Dal Pal`u, Mathias Möhl, Sebastian Will. WCB 2010, Edinburgh. Page 2. S.Will. Alignment of ...
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Alignments of RNA sequences allow us to identify functionally important regions and to trace the evolutionary history of related molecules by placing equivalent ...
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Abstract—We describe a theoretical unifying framework to express comparison of RNA structures, which we call alignment hierarchy. This framework relies on ...
Mar 16, 2016 · RNA secondary structure alignment estimates the similarities of two or more structures, from which their underlying functional similarities can ...
Traditional sequence alignment algorithms, however, fail at computing reliable alignments of low-homology RNA sequences. The spatial conformation of RNA ...
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An algorithm for computing the edit distance of two RNA structures with arbitrary kinds of pseudoknots that can be considered as a generalization of the ...