Our method does not insist on conserved gene structure between the two sequences, thus making it applicable for the pairwise comparison of more distantly ...
May 1, 2007 · We present an HMM based gene-finding program, which allows for coding in unidirectional nested and overlapping reading frames, to annotate two homologous ...
To the best of the knowledge, this work is the first to provide a full selection annotation of the Hepatitis B genome by explicitly modelling the evolution ...
Due to the biological necessity of them being constrained in length, RNA viruses in particular tend to code in overlapping reading frames. Since one amino acid ...
Our method does not insist on conserved gene structure between the two sequences, thus making it applicable for the pairwise comparison of more distantly ...
Sequence analysis Comparative annotation of viral genomes with non-conserved gene structure · Saskia de Groot, T. Mailund, Jotun Hein · Published 2006 · Biology, ...
Comparative annotation of viral genomes with non-conserved gene structure. Saskia de Groot and others. Bioinformatics, Volume 23, Issue 9, May 2007, Pages ...
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Comparative annotation of viral genomes with non-conserved gene structure. Motivation: Detecting genes in viral genomes is a complex task. Due to the ...
Jun 25, 2020 · Most viral genomes showed good correspondence between identified domains whether looking at the whole genome or looking in genes. Some genomes ...
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We here review methods for comparative structural genome annotation. The reviewed methods include classical approaches such as the alignment of protein ...