In this paper, we propose Genetic Algorithm (GA) for Spaced Motifs Elicitation on Nucleotides (GASMEN), which searches from a wide range of possible widths (4- ...
A new method, which is GA for Dimer-led and Error-restricted Spaced Motifs (GADESM), which achieves better fitness than GASMEN with statistical significance.
Generic spaced DNA motif discovery using Genetic Algorithm
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In this paper, we propose Genetic Algorithm (GA) for Spaced Motifs Elicitation on Nucleotides (GASMEN), which searches from a wide range of possible widths (4- ...
Bibliographic details on Generic spaced DNA motif discovery using Genetic Algorithm.
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This paper presented a comprehensive survey of the research literature in how GA have been used for DNA motif discovery. Within the scope of this research ...
We propose an efficient method, gadem, which combines spaced dyads and an expectation-maximization (EM) algorithm. Candidate words (four to six nucleotides) for ...
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Sep 12, 2013 · To discover generic spaced motifs which have multiple conserved patterns separated by wild-cards called spacers, the genetic algorithm (GA) ...
Here we present a generic motif discovery algorithm (Gemoda) for sequential data. Gemoda can be applied to any dataset with a sequential character.
Missing: Genetic | Show results with:Genetic
Motivated by better optimization in real applications, we have developed a new method, which is GA for Dimer-led and Error-restricted Spaced Motifs (GADESM).
[PDF] Motif Discovery in Biological Sequences - SJSU ScholarWorks
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... genetic algorithm. The genetic algorithm used for motif discovery starts with the initialization phase. This phase is then followed by an iterative process ...