To put our results into perspective, we present a systematic analysis of five different state-of-the-art annotation compression schemes, evaluate key metrics on ...
We show an up to 29% improvement in compression performance over the basic BRWT method, and up to a 68% improvement over the current state-of-the-art for de ...
This repository implements the following schemes for representing graph annotation. This repository is no longer maintained. Check out the MetaGraph project.
An efficient, scalable and exact representation of high-dimensional color information enabled via de bruijn graph search. In International Conference on ...
This work presents a systematic analysis of five different state-of-the-art annotation compression schemes that evaluates key metrics on both artificial and ...
(PDF) Sparse Binary Relation Representations for Genome Graph ...
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Nov 12, 2018 · In this work, we present a systematic analysis of five different state-of-the-art annotation compression schemes that evaluates key metrics on ...
In recent research, several graph data structures have been proposed to represent large sets of sequencing data and to allow for efficient querying of sequences ...
To put our results into perspective, we present a systematic analysis of five different state-of-the-art annotation compression schemes, evaluate key metrics on ...
Aug 27, 2020 · genomegraphannotation website. Sparse Binary Relation Representations for Genome Graph Annotation. Environment Modules. Run module spider ...
High-throughput DNA sequencing data is accumulating in public repositories, and efficient approaches for storing and indexing such data are in high demand.