May 29, 2021 · Stochastic Petri Nets (SPNs) have become a widespread and reference formalism to model metabolic networks thanks to their natural expressiveness ...

This work first presents a framework to implement SPN models into SystemC code. Then, it shows how the framework allows for automatic parameterization of the ...

Model development and simulation of biological networks is recognized as a key task in Systems Biology. Integrated with in vitro and in vivo experimental ...

Model development and simulation of biological networks is recognized as a key task in Systems Biology. Integrated with in vitro and in vivo experimental data, ...

Model development and simulation of biological networks is recognized as a key task in Systems Biology. Integrated with in vitro and in vivo experimental ...

May 29, 2021 · Stochastic Petri Nets (SPNs) have become a widespread and reference formalism to model metabolic networks thanks to their natural expressiveness ...

Abstract: Stochastic Petri nets (SPN) are a form of Petri net where the transitions fire after a probabilistic and randomly determined delay.

SystemC Implementation of Stochastic Petri Nets for Simulation and Parameterization of Biological Networks · ISSN: 15399087 · DOI: 10.1145/3427091 · Publisher:.

This paper presents a framework that synthesizes the SPN models into SystemC code and applies it to implement and simulate a complex biological network, ...

Starting from the SPN model of a metabolic net- work, the framework generates SystemC code that implements the network dynamics. The user defines network ...