In this paper, we develop a new SNP caller named abSNP, which offers three innovations. (a) abSNP calls SNPs from RNA-Seq data. Since RNA-Seq data is primarily ...
In this paper, we develop a new SNP caller named abSNP, which offers three innovations. (a) abSNP calls SNPs from RNA-Seq data. Since RNA-Seq data is primarily ...
A new SNP caller named abSNP is developed, which is able to achieve near-perfect sensitivity on high-coverage SNPs, even when multiply mapped, ...
Dive into the research topics of 'AbSNP: RNA-Seq SNP calling in repetitive regions via abundance estimation'. Together they form a unique fingerprint.
abSNP is an RNA-Seq SNP calling software. It takes raw reads or read alignment as input, and output SNP candidates. Unlike existing SNP callers, it explores ...
Aug 23, 2018 · Bibliographic details on abSNP: RNA-Seq SNP Calling in Repetitive Regions via Abundance Estimation.
In this paper, we develop a new SNP caller named abSNP, which offers three innovations. (a) abSNP calls SNPs from RNA-Seq data. Since RNA-Seq data is primarily ...
abSNP: RNA-seq SNP calling in repetitive regions via abundance estimation. S Mao, S Mohajer, K Ramachandran, D Tse, S Kannan. 17th International Workshop on ...
SNP calling from RNA-seq data without a reference genome: identification, quantification, differential analysis and impact on the protein sequence
Missing: abSNP: Repetitive via
abSNP: RNA-seq SNP calling in repetitive regions via abundance estimation. S Mao, S Mohajer, K Ramachandran, D Tse, S Kannan. 17th International Workshop on ...
People also ask
When counting rna-seq reads mapping to genes what assignment rate are we expecting to exceed if there are no major issues?
What is SNP RNA?
Which DNA sequencing platform is most current research using Rnaseq to investigate differential gene expression?
What does RNA-Seq quantify?