| PHISTO: Pathogen–Host Interaction Search Tool S Durmuş Tekir, T Çakır, E Ardıç, AS Sayılırbaş, G Konuk, M Konuk, ... Bioinformatics 29 (10), 1357-1358, 2013 | 166 | 2013 |
| A Review on Computational Systems Biology of Pathogen-Host Interactions S Durmuş, T Çakır, A Özgür, R Guthke Frontiers in Microbiology 6, 235, 2015 | 128 | 2015 |
| Computational Approaches for Prediction of Pathogen-Host Protein-Protein Interactions E Nourani, F Khunjush, S Durmuş Frontiers in Microbiology 6, 94, 2015 | 124 | 2015 |
| Infection strategies of bacterial and viral pathogens through pathogen–human protein–protein interactions S Durmuş Tekir, T Çakır, KÖ Ülgen Frontiers in Microbiology 3, 2012 | 90 | 2012 |
| Comparative interactomics for virus–human protein–protein interactions: DNA viruses versus RNA viruses S Durmuş, KÖ Ülgen FEBS open bio 7 (1), 96-107, 2017 | 61 | 2017 |
| Systems biology of pathogen‐host interaction: Networks of protein‐protein interaction within pathogens and pathogen‐human interactions in the post‐genomic era S Durmuş Tekir, KÖ Ülgen Biotechnology Journal 8 (1), 85-96, 2013 | 42 | 2013 |
| Network-Based Metabolism-Centered Screening of Potential Drug Targets in Klebsiella pneumoniae at Genome Scale MF Cesur, B Siraj, R Uddin, S Durmuş, T Çakır Frontiers in cellular and infection microbiology 9, 447, 2020 | 40 | 2020 |
| Drug targets for tumorigenesis: insights from structural analysis of EGFR signaling network S Durmuş Tekir, KY Arga, KÖ Ülgen Journal of Biomedical Informatics 42 (2), 228-236, 2009 | 29 | 2009 |
| Novel approaches for systems biology of metabolism-oriented pathogen-human interactions: a mini-review T Çakır, G Panagiotou, R Uddin, S Durmuş Frontiers in Cellular and Infection Microbiology 10, 52, 2020 | 19 | 2020 |
| Analysis of enzymopathies in the human red blood cells by constraint-based stoichiometric modeling approaches S Durmuş Tekir, T Çakır, KÖ Ülgen Computational Biology and Chemistry 30 (5), 327-338, 2006 | 19 | 2006 |
| Computational prediction of virus–human protein–protein interactions using embedding kernelized heterogeneous data E Nourani, F Khunjush, S Durmuş Molecular bioSystems 12 (6), 1976-1986, 2016 | 16 | 2016 |
| Reconstruction and crosstalk of protein–protein interaction networks of Wnt and Hedgehog signaling in Drosophila melanogaster A Eren Toku, S Durmuş Tekir, FB Kavun Özbayraktar, KÖ Ülgen Computational Biology and Chemistry 35 (5), 282-292, 2011 | 15 | 2011 |
| Reconstruction of Protein‐Protein Interaction Network of Insulin Signaling in Homo Sapiens S Durmuş Tekir, P Ümit, A Eren Toku, KÖ Ülgen BioMed Research International 2010 (1), 690925, 2010 | 14 | 2010 |
| Systems biology modeling to study pathogen–host interactions MF Cesur, S Durmuş Host-Pathogen Interactions: Methods and Protocols, 97-112, 2018 | 10 | 2018 |
| Wnt Signaling Network in Homo Sapiens B Nalbantoglu, S Durmuş Tekir, KÖ Ülgen Cell Metabolism - Cell Homeostasis and Stress Response, 163, 2012 | 9 | 2012 |
| Computational systems biology of metabolism in infection MF Cesur, E Abdik, Ü Güven-Gülhan, S Durmuş, T Çakır Metabolic interaction in infection, 235-282, 2018 | 8 | 2018 |
| Data-based reconstruction of gene regulatory networks of fungal pathogens R Guthke, S Gerber, T Conrad, S Vlaic, S Durmuş, T Çakır, FE Sevilgen, ... Frontiers in Microbiology 7, 570, 2016 | 8 | 2016 |
| Editorial: Computational Systems Biology of Pathogen-Host Interactions S Durmuş, T Çakır, R Guthke Frontiers in Microbiology 7, 21, 2016 | 5 | 2016 |
| Computational approaches for prediction of pathogen-host proteinprotein interactions. Front Microbiol. 2015; 6: 94 E Nourani, F Khunjush, S Durmus | 5 | 2015 |
| Investigation of infection mechanisms through pathogen-human protein-protein interactions by bioinformatics approaches S Durmuş-Tekir Unpublished doctoral dissertation). Boğaziçi University, İstanbul, 2013 | 4 | 2013 |
Kutlu O. UlgenProfessor of Chemical Engineering, Bogazici UniversityVerified email at boun.edu.tr
