User profiles for François Bucchini

François Bucchini

PhD student, Ghent University
Verified email at psb.vib-ugent.be
Cited by 403

TRAPID 2.0: a web application for taxonomic and functional analysis of de novo transcriptomes

F Bucchini, A Del Cortona, Ł Kreft, A Botzki… - Nucleic Acids …, 2021 - academic.oup.com
Advances in high-throughput sequencing have resulted in a massive increase of RNA-Seq
transcriptome data. However, the promise of rapid gene expression profiling in a specific …

Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds

…, CJ Jackson, F Bucchini… - Proceedings of the …, 2020 - National Acad Sciences
The Neoproterozoic Era records the transition from a largely bacterial to a predominantly
eukaryotic phototrophic world, creating the foundation for the complex benthic ecosystems that …

Evolutionary genomics of sex-related chromosomes at the base of the green lineage

LF Benites, F Bucchini… - Genome Biology and …, 2021 - academic.oup.com
Although sex is now accepted as a ubiquitous and ancestral feature of eukaryotes, direct
observation of sex is still lacking in most unicellular eukaryotic lineages. Evidence of sex is …

Gene expression during bacterivorous growth of a widespread marine heterotrophic flagellate

…, D López-Escardó, A Obiol, F Bucchini… - The ISME …, 2021 - academic.oup.com
Phagocytosis is a fundamental process in marine ecosystems by which prey organisms are
consumed and their biomass incorporated in food webs or remineralized. However, studies …

Comparative genomics reveals new functional insights in uncultured MAST species

…, F Latorre, G Leonard, F Bucchini… - The ISME …, 2021 - academic.oup.com
Heterotrophic lineages of stramenopiles exhibit enormous diversity in morphology, lifestyle,
and habitat. Among them, the marine stramenopiles (MASTs) represent numerous …

EBI metagenomics in 2016-an expanding and evolving resource for the analysis and archiving of metagenomic data

A Mitchell, F Bucchini, G Cochrane… - Nucleic acids …, 2016 - academic.oup.com
EBI metagenomics ( https://www.ebi.ac.uk/metagenomics/ ) is a freely available hub for the
analysis and archiving of metagenomic and metatranscriptomic data. Over the last 2 years, …

Genome Analyses of the Microalga Picochlorum Provide Insights into the Evolution of Thermotolerance in the Green Lineage

…, E Vancaester, S Rombauts, F Bucchini… - Genome biology and …, 2018 - academic.oup.com
While the molecular events involved in cell responses to heat stress have been extensively
studied, our understanding of the genetic basis of basal thermotolerance, and particularly its …

Gene space completeness in complex plant genomes

M Van Bel, F Bucchini, K Vandepoele - Current opinion in plant biology, 2019 - Elsevier
… Author links open overlay panel Michiel Van Bel 1 2 , François Bucchini 1 2 , Klaas …
François Bucchini is funded by the European Union’s Horizon 2020 research and innovation …

The medium-size noncoding RNA transcriptome of Ostreococcus tauri, the smallest living eukaryote, reveals a large family of small nucleolar RNAs displaying …

…, C Hemon, P Malburet, F Bucchini… - NAR Genomics and …, 2020 - academic.oup.com
The small nucleolar RNAs (snoRNAs), essential for ribosome biogenesis, constitute a major
family of medium-size noncoding RNAs (mncRNAs) in all eukaryotes. We present here, for …

GREAT: a web portal for Genome Regulatory Architecture Tools

C Bouyioukos, F Bucchini, M Elati… - Nucleic Acids …, 2016 - academic.oup.com
GREAT (Genome REgulatory Architecture Tools) is a novel web portal for tools designed to
generate user-friendly and biologically useful analysis of genome architecture and regulation…