An Experimentally Validated Genome-Scale Metabolic Reconstruction of Klebsiella pneumoniae MGH 78578, iYL1228
YC Liao, TW Huang, FC Chen, P Charusanti… - Journal of …, 2011 - Am Soc Microbiol
… Although the difference was reduced to 20.1% (65 out of 323) after validation of the consensus
Biolog result obtained from the two data sets with our experimental result for MGH 78578, …
Biolog result obtained from the two data sets with our experimental result for MGH 78578, …
Network-Based Metabolism-Centered Screening of Potential Drug Targets in Klebsiella pneumoniae at Genome Scale
… the network topology of the reconstructed GMN to prioritize drug targets in combination with
genomic… In this regard, we investigated metabolic pathways in KEGG and BioCyc databases …
genomic… In this regard, we investigated metabolic pathways in KEGG and BioCyc databases …
Comparative genomic reconstruction of transcriptional regulatory networks in bacteria
DA Rodionov - Chemical reviews, 2007 - ACS Publications
… in two Erwinia species and Klebsiella pneumoniae also include the rhiT-… reconstruction of
metabolic pathways from genomic data have led to the development of metabolic databases …
metabolic pathways from genomic data have led to the development of metabolic databases …
The Capsule Regulatory Network of Klebsiella pneumoniae Defined by density-TraDISort
… of capsule regulatory genes are located in the core genome. … pneumoniae were identified,
and we use these data to … Complementation caused a complete restoration of wild-type …
and we use these data to … Complementation caused a complete restoration of wild-type …
Genomic reconstruction of transcriptional regulatory networks in lactic acid bacteria
… reconstructed in the studied genomes (Additional file5). Initially we collected the published
experimental data on transcriptional regulation … availability of experimental data, we applied …
experimental data on transcriptional regulation … availability of experimental data, we applied …
Exploring the metabolic network of the epidemic pathogen Burkholderia cenocepacia J2315 via genome-scale reconstruction
… We reconstructed the genome-scale metabolic network of B. cenocepacia J2315. An iterative
reconstruction … cenocepacia J2315 from the public biological databases. Careful effort was …
reconstruction … cenocepacia J2315 from the public biological databases. Careful effort was …
Metabolic diversity of the emerging pathogenic lineages of Klebsiella pneumoniae
C Blin, V Passet, M Touchon… - Environmental …, 2017 - Wiley Online Library
… genomic and phenotypic analysis of a diverse set of K. … the regulatory networks of the
strains, or to some redundancy in … We used IQ-TREE version 1.2.3 to reconstruct the maximum …
strains, or to some redundancy in … We used IQ-TREE version 1.2.3 to reconstruct the maximum …
An integrative, multi-omics approach towards the prioritization of Klebsiella pneumoniae drug targets
PIP Ramos, D Fernandez Do Porto, E Lanzarotti… - Scientific reports, 2018 - nature.com
… of a multidimensional data integration strategy in order to prioritize drug targets in K. … validated
in silico genome-scale metabolic reconstruction available for K. pneumoniae MGH 78578 …
in silico genome-scale metabolic reconstruction available for K. pneumoniae MGH 78578 …
[PDF][PDF] The capsule regulatory network of Klebsiella pneumoniae defined by density-TraDISort. mBio 9: e01863-18
MJ Dorman, T Feltwell, DA Goulding, J Parkhill… - 2018 - research-management.mq.edu.au
… tory genes are located in the core genome. Overall, our findings … pneumoniae were identified,
and we use these data to … Complementation caused a complete restoration of wild-type …
and we use these data to … Complementation caused a complete restoration of wild-type …
Novel antimicrobial development using genome-scale metabolic model of Gram-negative pathogens: a review
WY Chung, Y Zhu, MH Mahamad Maifiah… - The Journal of …, 2021 - nature.com
… of Genes and Genomes [32] and Biocyc [33] databases. The … process of metabolic network
reconstruction from months to a … of Klebsiella pneumoniae drug targets. Sci Rep. 2018;8. …
reconstruction from months to a … of Klebsiella pneumoniae drug targets. Sci Rep. 2018;8. …