User profiles for Yassine Ghouzam
 | Yassine GhouzamUniversité paris diderot paris 7 Verified email at etu.univ-paris-diderot.fr Cited by 217 |
Recent advances on polyproline II
About half of the globular proteins are composed of regular secondary structures, α-helices,
and β-sheets, while the rest are constituted of irregular secondary structures, such as turns …
and β-sheets, while the rest are constituted of irregular secondary structures, such as turns …
ORION: a web server for protein fold recognition and structure prediction using evolutionary hybrid profiles
Protein structure prediction based on comparative modeling is the most efficient way to produce
structural models when it can be performed. ORION is a dedicated webserver based on …
structural models when it can be performed. ORION is a dedicated webserver based on …
Improving protein fold recognition with hybrid profiles combining sequence and structure evolution
Motivation: Template-based modeling, the most successful approach for predicting protein
3D structure, often requires detecting distant evolutionary relationships between the target …
3D structure, often requires detecting distant evolutionary relationships between the target …
An ambiguity principle for assigning protein structural domains
Ambiguity is the quality of being open to several interpretations. For an image, it arises when
the contained elements can be delimited in two or more distinct ways, which may cause …
the contained elements can be delimited in two or more distinct ways, which may cause …
An empirical energy function for structural assessment of protein transmembrane domains
Knowing the structure of a protein is essential to characterize its function and mechanism at
the molecular level. Despite major advances in solving structures experimentally, most …
the molecular level. Despite major advances in solving structures experimentally, most …
OREMPRO web server: orientation and assessment of atomistic and coarse-grained structures of membrane proteins
The experimental determination of membrane protein orientation within the lipid bilayer is
extremely challenging, such that computational methods are most often the only solution. …
extremely challenging, such that computational methods are most often the only solution. …
Membrane positioning for high-and low-resolution protein structures through a binary classification approach
The critical importance of algorithms for orienting proteins in the lipid bilayer stems from the
extreme difficulty in obtaining experimental data about the membrane boundaries. Here, we …
extreme difficulty in obtaining experimental data about the membrane boundaries. Here, we …
TMPL: a database of experimental and theoretical transmembrane protein models positioned in the lipid bilayer
Knowing the position of protein structures within the membrane is crucial for fundamental
and applied research in the field of molecular biology. Only few web resources propose …
and applied research in the field of molecular biology. Only few web resources propose …
An Ambiguous View of Protein Architecture
Qualifying something as ambiguous means that several interpretations are possible to describe
it. We have proposed that such view might be used to analyze protein architecture into …
it. We have proposed that such view might be used to analyze protein architecture into …
Tarun Jairaj Narwani, Hubert Santuz, Nicolas Shinada, Akhila Melarkode Vattekatte, Yassine Ghouzam, et al.. Recent advances on polyproline II.. Amino Acids, 2017 …
About half of the globular proteins are composed of regular secondary structures, α-helices,
and β-sheets, while the rest are constituted of irregular secondary structures, such as turns …
and β-sheets, while the rest are constituted of irregular secondary structures, such as turns …