Tutorial MagIC Net 2.X
Tutorial MagIC Net 2.X
Tutorial MagIC Net 2.X
8.102.8001EN
Metrohm AG
CH-9101 Herisau
Switzerland
Phone +41 71 353 85 85
Fax +41 71 353 89 01
[email protected]
www.metrohm.com
Tutorial
8.102.8001EN
07.2009 ek
Teachware
Metrohm AG
CH-9101 Herisau
[email protected]
Table of contents
Table of contents
1
Tutorial
Introduction
1.1
1.2
1.3
Configuration
2.1
2.2
2.3
2.4
2.5
2.6
Creating method
21
3.1
3.1.1
3.1.2
3.1.3
3.1.4
3.1.5
3.2
3.2.1
3.2.2
3.2.3
3.2.4
3.2.5
III
Table of contents
IV
69
4.1
Equilibration ............................................................. 70
4.2
4.3
4.4
Editing determinations
81
5.1
5.2
5.3
5.4
5.5
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1
1.1
1 Introduction
Introduction
Structure of the tutorial
The present tutorial guides you through your first steps with the
software MagIC Net. You will be introduced to the most important operating features by recording a chromatogram. The introduction will involve determining the concentration of the anions
F-, Cl-, NO2-, Br-, NO3-, PO43- and SO42- in tap water. An 850 Professional IC Anion MCS and a Metrosep A Supp 5 column with
integrated chip are used in the determinations.
The tutorial is arranged in four parts:
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1.2
Program description
MagIC Net comprises the following program parts:
Workplace
Opening/Closing Workplaces
Entering sample data
Starting individual determinations and series of samples
Live visualization of chromatograms and system parameters (Watch Window)
Database
Opening/Closing databases
Managing determinations
Reprocessing determinations
Creating reports
Method
Configuration
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1 Introduction
Manual Control
1.3
Visualization conventions
The following symbols and formats will be used in this documentation:
Instruction step
Carry out these steps in the
sequence shown.
Method
File New
[Continue]
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Configuration
The Metrohm devices connected to the PC via a USB connector
are automatically recognized when the program is started, as are
the devices (dosinos, stirrers, pumps, remote box) connected to
MSB connectors of USB devices. Metrohm devices and external
devices connected to the PC via an RS232 connector must be
added manually to the device table.
All hardware components used in a method must be saved in the
program part Configuration. This can include:
2.1
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2 Configuration
Devices
Columns
Eluent
Accessories
Solutions
Rack Data
Common variables
2.2
Configuring devices
Proceed as follows to start the 850 Professional IC Anion
MCS for the first time:
Connecting 850 Professional IC
1 Connecting instrument
Connect device to the PC using a USB cable.
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2 Switching on device
The device parameters of the 850 Professional IC Anion
MCS are automatically recognized.
4 Checking properties
Check the data in the Properties dialog window and close
with [OK].
The 850 Professional IC Anion MCS is entered in the
device list in the Devices subwindow.
5 Changing device name (optional)
Proceed as follows to give your device another name:
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2 Configuration
In the device table, double click on the line with the entry
850 Professional IC Anion MCS.
Select the General tab.
Enter the new name in the Device name field.
Close the dialog window with [OK].
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2.3
2 Configuration
Configuring column
Columns with chip
An installed column is automatically recognized when the IC device
is connected and entered in the column table in the Columns
subwindow. The parameters of Metrohm columns with integrated
chips are entered in the corresponding tabs.
1 Inserting column in holder
The column is recognized by MagIC Net.
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This tab is only available for automatically recognized columns with a chip.
10
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2 Configuration
2 Selecting column
Highlight the column Metrosep A Supp 5 in the list and
click on [OK].
The Column - Metrosep A Supp 5 dialog window is
opened.
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11
3 Editing column
Note
12
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2 Configuration
2.4
Defining eluent
Eluents are defined in the Eluent subwindow.
1 Use the Edit New... menu to open the Eluent dialog
window.
2 Eluent properties
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Input
Eluent name
Std-ASUPP5
Order number
optional
Manufacturer
optional
Batch number
optional
13
Composition
Comment
optional
14
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2 Configuration
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15
2.5
Adding solutions
Solutions for the suppressor are defined in the Solutions subwindow.
1 Use the Edit New menu to open the Solution dialog
window.
2 Edit the Solution tab
16
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2 Configuration
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17
2.6
Adding accessories
Accessories must always be added and configured manually. The
individual steps are executed in the Accessories subwindow.
Two pump tubings and one pump tubing connection with security
device and filter are added. The pump tubing connection with
inline filter is used to protect the separation column and suppressor
from potential contamination from the eluents or rinsing solution.
18
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2 Configuration
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19
button.
20
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3 Creating method
Creating method
A method is a procedural specification for processing a sample. It
comprises all elements which are needed to record a chromatogram. These include:
3.1
3.1.1
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21
22
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3 Creating method
Time Program
Evaluation
Chromatograms
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23
3.1.2
24
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3 Creating method
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25
26
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3 Creating method
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27
28
Select the Pump tab (or click on the symbol of the pump).
The values of the fields Flow, Pmin and Pmax are read in
automatically.
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3 Creating method
Use the Eluent list box to select the Std-ASUPP5 previously defined.
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29
Select the MSM tab (or click on the symbol of the MSM).
Accept the default setting.
30
Select the MCS tab (or click on the symbol of the MCS).
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3 Creating method
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Select the Column thermostat tab (or click on the symbol of the column thermostat).
31
3.1.3
Time program
The time program is a component of each method. It provides a
step by step description of the sequence for processing a sample.
The time program is compiled in the Time program subwindow
of the program part Method.
Defining time program
1 Switching injection valve to fill
32
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3 Creating method
Select 850 Professional IC Anion MCS Injector Fill in the left of the window under commands.
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33
3 Interrupting program
The program is stopped in order to fill the injection valve
manually.
34
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3 Creating method
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35
Select 850 Professional IC Anion MCS Injector Inject in the left of the window under commands.
36
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3 Creating method
The complete time program for manual filling of the injection valve
appears as follows:
3.1.4
Evaluation
The parameters for evaluating the chromatograms are defined in
the Evaluation subwindow. Each analysis has its own set of evaluation parameters.
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37
Integration
The integration parameters are defined in the method template.
1 Click on the Integration button.
Components
The components and parameters for the identification are defined
in the method template.
1 Click on the Components button.
38
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3 Creating method
2 The entries in the tabs Component table and Identification are accepted.
Standards
In the Standards area, the concentrations of the components are
indicated in the standard solutions.
1 Click on the Standards button.
The Standard Table lists all the components defined in the
method template.
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39
40
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3 Creating method
Calibration
The calibration is performed after the method of the external
standards. The peak areas in the chromatogram of an unknown
sample are compared with the peak values of the components of
a standard solution with known concentrations. The calibration
method is specified in the method template.
1 Click on the Calibration button.
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41
can be edited line by line. Either via the Edit Edit menu or
by double clicking on a line, which opens the Calibration
curve dialog window of the corresponding component.
Results
The results of the determinations are saved in the standard database MagIC (further databases can be defined). You can also
indicate that a report is to be generated once the evaluation is
complete.
1 Saving results in database
42
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3 Creating method
You also have the option of creating your own report template
(see Chapter 5.4, page 90).
3.1.5
Saving method
Saving method
After having entered all the relevant parameters for the method,
save the method as follows:
1 Use the File Save as... menu to open the Save
method dialog window.
2 In the Method name field, enter Tap water as the name
for the method.
3 Click on [Save].
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43
3.2
3.2.1
3.2.2
44
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3 Creating method
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45
46
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3 Creating method
3 In the Analysis name field, enter the new name Tap water
(auto) and confirm with [OK].
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47
48
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3 Creating method
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49
security device and filter are added to the table in the same
way.
Select the Pump tab (or click on the symbol of the pump).
The values of the fields Flow, Pmin and Pmax are read in
automatically.
Use the Eluent list box to select the Std-ASUPP5 previously defined.
50
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3 Creating method
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Select the MSM tab (or click on the symbol of the MSM).
51
Select the MCS tab (or click on the symbol of the MCS).
Accept the default settings.
52
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3 Creating method
Select the Column thermostat tab (or click on the symbol of the column thermostat).
Accept the default settings.
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53
54
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3 Creating method
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55
3.2.3
Time program
The time program is a component of each method. It provides a
step by step description of the sequence for processing a sample.
The time program is compiled in the Time program subwindow
of the program part Method. The time program for an automated
sequence of determinations contains additional commands for the
sample processor, in contrast to a manual method.
Defining time program
1 Switching injection valve to fill
56
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3 Creating method
Select 850 Professional IC Anion MCS Injector Fill in the left of the window under commands.
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57
58
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3 Creating method
Select 858 Professional Sample Processor Tower Move (Rack) in the left of the menu
under commands.
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59
60
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3 Creating method
Select 858 Professional Sample Processor Peristaltic On/Off in the left of the menu under commands.
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61
Select 858 Professional Sample Processor Peristaltic On/Off in the left of the menu under commands.
62
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3 Creating method
Select 850 Professional IC Anion MCS Injector Inject in the left of the menu under commands.
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63
64
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3 Creating method
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65
11 Switching on rinsing
66
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3 Creating method
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67
3.2.4
Evaluation
(see Chapter 3.1.4, page 37)
3.2.5
Saving method
Saving method
After having entered all the relevant parameters for the method,
save the method as follows:
1 Use the File Save as... menu to open the Save
method dialog window.
2 In the Method name enter Tap water (auto) as a name
for the method.
3 Click on [Save].
68
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Run
Live display 1
Report
Watch window
Time Program
Live display 2
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69
4.1 Equilibration
4.1
Equilibration
Starting equilibration
Before the analysis is carried out, the IC device must be balanced
for around 30 minutes until the baseline is stable.
1 Change to the program part Workplace.
button.
70
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2 Select Workplace list box and highlight the 850 Professional IC Anions MCS in the left part of the window.
3 Select the MSM tab.
4 Click on the [Next] button.
5 Click on the [Next] button again after 10 min.
6 Repeat step 5 twice again.
This ensures that all three chambers of the suppressor are
regenerated.
4.2
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71
72
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73
4.3
3 Use the Edit Edit line menu to open the dialog window
Edit line - Working sample table - Workplace.
4 In the Method field, click on the
button.
74
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The values are written in the first line of the sample table.
6 Entering values for Standard 2
button.
The next higher value is automatically entered in the Position field. The values of standard 1 are automatically accepted in the Injection, Volume, Dilution and Sample
amount fields.
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75
9 Stopping hardware
76
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77
4.4
78
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80
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5
5.1
5 Editing determinations
Editing determinations
Viewing determinations
You have several options for selecting and viewing your determinations:
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81
Quick filter
1 Click on the menu Determinations Filter Quick filter.
The cursor turns into a special filter symbol. When navigating
within the table, the cells in which the cursor is located will
have a yellow background.
2 Place the cursor in a cell serving as a filter criterion and click
with the left mouse button.
The datasets are filtered according to the content of the
required table field. The quick filter can be applied again
within the filtered table.
Special filter
The special filter allows you to specify the filter conditions in detail.
1 Open the corresponding dialog window via the Determinations Filter Special filter menu.
2 Use the Edit Edit line menu to open the dialog window
Edit filter criterion New filter.
82
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5 Editing determinations
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83
Search
1 Use the Determinations Search menu to open the
Search - Database 'MagIC Net' dialog window.
2 In the Search in list box, highlight the entry User (short
name).
3 Enter your short name in the Search word field.
4 Click on [Search next].
The first line corresponding to the search term is highlighted.
84
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5 Editing determinations
In the Batch name list box, select the name Batch tap
water.
Higlight the option Selected determinations.
Click on [OK].
In the Batch name list box, select the name Batch tap
water.
Click on [OK].
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85
5.2
Viewing results
Zoom with mouse
The zoom function can be used to magnify individual areas of a
chromatogram.
1 Highlight a dataset in the overview table.
The associated chromatogram is shown in the Curves 1 subwindow.
2 Zoom in on the area to be magnified while keeping the left
mouse button pressed.
86
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5 Editing determinations
4 In the X axis area in the from field, enter the value 4.5 and
in the field to the value 5.5.
5 Click on [OK].
The peak of nitrite is zoomed in.
Unzoom
1 Click in the chromatogram with the right mouse button.
2 Click on the context menu Unzoom.
The chromatogram is shown in its original size.
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87
5.3
Reprocessing determinations
When reprocessing determinations, sample data, evaluation
parameters and curve spread can be changed and the results recalculated.
As an example, the evaluation over the peak height is described
instead of over the peak area, which is defined in the method
template.
1 Reprocessing calibration curve
88
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5 Editing determinations
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89
3 Click on [OK].
5.4
90
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5 Editing determinations
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91
5.5
Printing report
Printing calibration curve
1 In the Determination overview subwindow, highlight the
line of standard 3.
2 Use the File Print Report... menu to open the Report
output dialog window.
3 In the Selection area, highlight the Selected determinations option.
4 In the Report type area, highlight the Report template
option and select the Result and Calibration report template.
5 In the Output line area, deactivate the Printer check box
activate the PDF file check box.
6 The symbol and in the Save as dialog window, use the
File name field to enter the name Calibration curve.
7 Click on [Save].
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5 Editing determinations
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