Abe. 2007. Enzymatic Synthesis of Cyclic Triterpenes PDF
Abe. 2007. Enzymatic Synthesis of Cyclic Triterpenes PDF
Abe. 2007. Enzymatic Synthesis of Cyclic Triterpenes PDF
DOI: 10.1039/b616857b
This review covers recent advances in the chemistry and enzymology of squalene cyclase and
oxidosqualene cyclase. The enzymatic cyclizations of squalene and oxidosqualene are the most
remarkable steps in the biosynthesis of sterols and triterpenes. The polyenes are converted to various
polycyclic triterpenes by different enzyme systems employing only small modification of the active-site.
Recent crystallographic and structure-based mutagenesis studies as well as utilization of chemically
synthesized active-site probes have begun to reveal intimate structural details of the enzyme-templated
cyclization reactions. 126 References are cited.
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Scheme 1 Proposed mechanism for formation of (A) hopene by SHC and (B) lanosterol by OSLC.
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2 Structural biology
2.1 Squalene : hopene cyclase
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Fig. 1 Stereoview of the active-site of A. acidocaldarius SHC. (A) Squalene model (green) indicating the first four carbocation additions to double bonds
(green dots). The observed 2-azasqualene structure (thin dark lines) is given for reference. (B) Models of the 6.6.6.5 tetracycle (green) and the hopanyl
cation (blue). Reprinted from ref 36;Chem. Biol., 2004, 11, 121. Copyright Elsevier 2004.
Moreover, it should also be noted that most of the partially cyclized additional isoprene unit, which involves regiospecific final proton
products obtained from SHC enzyme reactions with substrate elimination from the terminal cationic intermediate (Scheme 6),
analogues are derived from final proton elimination rather than suggesting enough space is left for the putative deprotonating
cation hydration.14 Interestingly, as described later, this is also the water.43
case for the enzymatic formation of an unnatural 6.6.6.6.6.5-fused After the enzyme reaction, the cyclized products eventually have
hexacyclic polyprenoid from a C35 substrate analogue with an to pass through the nonpolar channel connecting the active-site
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cavity to the membrane interior. In the crystal structures, however, 2.2 Oxidosqualene : lanosterol cyclase
this channel appears to be too narrow for the bulky products.35 On
the basis of the observation that the wall between the channel The long-awaited X-ray crystal structure of human OSLC was
and dimer surface is rather mobile, the channel cross-section is finally solved by Ruf and co-workers at Hoffmann-La Roche in
proposed to be appreciably enlarged by melting and displacing 2004 (Fig. 2).44,45 The crystal structure revealed two (a/a) barrel
the mobile peptide. This seems likely since the thermoacidophilic domains connected by loops and smaller b-sheet structures with
enzyme reaction is optimal at 60 ◦ C, and the cyclization reaction identical topology to that observed in A. acidocaldarius SHC.34
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is highly exergonic (about 200 kJ mol−1 ).36 The active-site of the 83 kDa membrane-bound enzyme, sharing
Fig. 2 Stereoview of the active-site of human OSLC. (a) The omit electron density map showing the binding of product lanosterol in the active-site.
(b) A- and B-rings region with the active-site residues. (c) C- and D-rings region with the active-site residues. Reprinted from ref. 45; Nature, 2004, 432,
118. Copyright 2004, with permission from Nature Publishing Group.
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25% amino acid sequence identity with A. acidocaldarius SHC, aromatic residues.45 This knowledge of the inhibitor binding mode
is located in a large central cavity lined with aromatic residues, in the enzymes may help develop more potent and efficient enzyme
and a hydrophobic plateau serves as the monotopic membrane inhibitors of both OSLC and SHC.
insertion motif.45 As in the case of SHC, the QW-sequence motif37
appears to stabilize the enzyme structure by connecting surface
a-helices during the cyclization reaction. The structure of human
OSLC co-crystallized with lanosterol at 2.1 Å resolution indicated
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D-ring formation site, is deleted as in the case of eukaryotic amino acid sequence identity with the yeast OSLC) are essential
OSLC.52 Interestingly, the deletion mutant converted (3S)-2,3- for the catalytic activity.65 Recently, Wu and co-workers repeated
oxidosqualene into a mixture of monocyclic achilleol A (50) the mutagenesis experiments on the His234 residue of yeast
and 6.6.5-fused tricyclic products (36, 38, 39, and 40), but OSLC, and thoroughly analyzed the enzyme reaction products,
did not accept both squalene and (3R)-2,3-oxidosqualene. Since leading to identification of novel products; a 6.6.5-fused trans–
other site-directed mutagenesis studies on A. acidocaldarius SHC syn–trans tricyclic (13aH)-isomalabarica-14(26),17E,21-trien-3b-
were extensively reviewed by Hoshino and Sato in 2002,15 this ol (47), 6.6.6.5-fused tetracyclic protosta-12,24-dien-3b-ol (48)
review just briefly summarizes the structures of the cyclization and protosta-20,24-dien-3b-ol (49), in addition to the monocyclic
products (18–46) obtained by site-directed mutagenesis of A. achilleol A (50) and parkeol (53) (Scheme 4).66,67 Interestingly,
acidocaldarius SHC, which includes point mutants of Trp169,53 almost all of the mutants exhibited altered product specificities,
Ile261,54 Gln262,55 Pro263,55 Trp312,53 Phe365,56,57 Asp377,57 and most remarkably, by H234S and H234T substitution, OSLC
Tyr420,58–60 Trp489,53 Gly600,52 Phe601,58,61 Phe605,50,62 Leu607,60 was completely functionally converted to protosta-12,24-dien-3b-
Tyr609,57,63,64 and Tyr61257 (Fig. 3). ol synthase and parkeol synthase, respectively.66 Notably, this is the
long-sought mechanistic evidence for the formation of the 6.6.5-
3.2 Oxidosqualene : lanosterol cyclase fused tricyclic Markovnikov cation and the 6.6.6.5-fused tetra-
cyclic protosteryl cation during the cyclization of oxidosqualene
In 1997, Corey and co-workers first demonstrated that the folded in the chair–boat–chair conformation. Moreover, the results
conserved active-site residues His146, His234, and Asp456 in Sac- also demonstrate the catalytic plasticity of OSLC; how subtle
charomyces cerevisiae OSLC (ERG7) (corresponding to His144, changes in the catalytic environment may have stereoelectronic
His232, and Asp455, respectively, in human OSLC that shares 36% effects on the intrinsic His234 : Tyr510 hydrogen-bonding network
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(corresponding to His232 : Tyr503 in human OSLC), leading to a crucial role in guiding the course of the final rearrangement
formation of the structurally diverse product profiles.66 and proton elimination, but does not influence the construction
On the other hand, site-directed mutagenesis of the active-site of the tetracyclic ring system itself.70 On the other hand, the
Tyr510 of S. cerevisiae OSLC causes perturbation in the substrate Phe445 mutants (replaced with Cys, Met, Asn, Thr, or Asp)
folding, which results in formation of monocyclic, tricyclic, and produced the tricyclic (13aH)-isomalabarica-14(26),17E,21-trien-
tetracyclic by-products.68,69 Thus, the Y510F mutant produces the 3b-ol (47), in addition to 9b-lanosta-7,24-dien-3b-ol (52), parkeol,
tricyclic (13aH)-isomalabarica-14(26),17E,21-trien-3b-ol (47) in and lanosterol, suggesting that cation–p interactions between
addition to lanosterol, while Y510H and Y510A mutants afford a carbocationic intermediate and an enzyme can be replaced
a mixture of the monocyclic achilleol A (50) and the tetracyclic by an electrostatic or polar side chain to stabilize the cationic
parkeol (53) (Scheme 4). Considering the proposed catalytic role intermediates, but with product differentiation.71
of the Tyr510 hydroxyl group in the final H-9 proton abstraction
during lanosterol formation,45 it is interesting that the Y510F 3.3 Oxidosqualene : cycloartenol cyclase
mutant still predominantly retains the lanosterol-forming activity
despite the loss of the deprotonating hydroxyl group.69 Matsuda The proposed mechanism of cyclization of (3S)-2,3-oxidosqualene
and co-workers explained that the point mutant may have a similar into cycloartenol (55), the sterol precursor in plants, is essentially
active-site geometry; the native phenolic OH is replaced by an the same as that for lanosterol; only the difference is the final 9b,19-
ordered water that could abstract the H-9 proton and transfer a cyclopropane ring formation and elimination of H-19 instead of
proton to its hydrogen-bonding partner His234.69 Alternatively, it H-9 proton (Scheme 5).13 Here, the cyclopropane ring closure pro-
would also be possible that the new hydrogen-bond network may ceeds with retention of configuration, which was earlier confirmed
locate His234 close enough to H-9 for direct deprotonation.69 by incubation of 2,3-oxidosqualene bearing a chiral methyl group
The functional role of the conserved aromatic residues Trp232 (H, D, T) at C-6 with the phytoflagelate Ochromonas malhamensis
and Phe445 in S. cerevisiae OSLC have been also investigated.70,71 cell-free system.72 Cycloartenol synthase (CAS), sharing 30–46%
First, almost all of the Trp232 mutants produced protosta-12,24- amino acid sequence identity with OSLCs, was first cloned from
dien-3b-ol (48), parkeol (53), and lanosterol, indicating that the model plant Arabidopsis thaliana (CAS1, At2g07050),73 and
Trp232, located in proximity of the lanosterol C/D-ring, also plays have been extensively investigated by the Matsuda group. Since
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the previous Nat. Prod. Rep. article in 2003 comprehensively base. In contrast, when Tyr410 is mutated to Thr, H477N cannot
summarizes structure-function analysis of the CAS enzyme,38 this interact with the smaller and more distant Thr side chain and,
review just briefly complements recent research progresses. therefore, cannot influence catalysis.79
Previous studies have demonstrated that the strictly conserved
active-site residues Tyr410, His477, and Ile481 in A. thaliana CAS1
synergize to promote cycloartenol formation.74–77 Thus, Ile481, 4 Substrate specificity and catalytic potential
replaced with Val in OSLC, is at the top of the active-site cavity, 4.1 Squalene : hopene cyclase
and, by interacting with the A-ring, it orients the substrate in the
binding site to avoid early reaction termination.74 On the other The bacterial SHC, which catalyzes a stereochemically and
hand, Tyr410, replaced with Thr in OSLC, is hydrogen-bonded mechanistically simpler process than eukaryotic OSCs, shows
to His257, forming part of the ceiling of the active-site cavity broad substrate tolerance and remarkable catalytic potential; the
and positioned close to the C-19 angular methyl group. Finally, enzyme accepts a wide variety of squalene analogues (C25 –C31 ) and
His477, replaced with Gln or Cyc in OSLC, is not in the active-site, efficiently performs sequential ring-forming reactions to produce
but affects the product profile through interactions with Tyr410.78 a series of unnatural cyclic polyprenoids.11,13,15 On the basis of
Most interestingly, point mutations at these positions lead to the crystal structure of the enzyme,34 the hydrophobic active-site
production of lanosterol; I481V mutant produces 25% lanosterol cavity (ca. 1200 Å3 ) lined with aromatic residues appears to have
in addition to cycloartenol and parkeol (53),74 Y410T mutant enough space to accept bulky substrate analogues. By utilizing
forms 65% lanosterol along with 9b-lanosta-7,24-dien-3b-ol (52) such properties of the enzyme, it becomes possible to generate
and parkeol,75 while H477N mutant yields 88% lanosterol and unnatural novel polycyclic polyprenoids by enzymatic conversion
12% parkeol (Scheme 5).76 On the basis of homology modeling, of chemically synthesized substrate analogues.
H477N is thought to produce lanosterol by positioning the base One of the most impressive examples is the cyclization of a
near C-9/C-8, but close enough to C-11 to form some parkeol, C35 analogue (58) into a “supra-natural” hexacyclic polyprenoid
while I481V allows some lanosterol synthesis by introducing a (59); A. acidocaldarius SHC efficiently accepts a C35 analogue in
smaller side chain, which enlarges the active-site cavity, permitting which a farnesyl C15 unit is connected in a head-to-head fashion
rotation of the intermediate cation.78 to a geranylgeranyl C20 unit, and efficiently catalyzes sequential
Recently, Matsuda and co-workers further succeeded in engi- ring-forming reactions to produce a novel hexacyclic polyprenoid
neering CAS to more accurately produce lanosterol by combi- with a 6.6.6.6.6.5-fused ring system in 10% yield (Scheme 6A).43
nation of the above mentioned point mutations.79 Thus, CAS1 Interestingly, the cyclization of the C35 analogue (C15 unit + C20
H477N/I481V double mutant was found to be the most accurate unit) is directional; it is initiated from the C15 end, and not by
example of an enzyme mutated to produce lanosterol with 99% a proton attack on the terminal double bond of the C20 unit
accuracy, while Y410T/H477N/I481V triple mutant still yielded (Scheme 6B). This suggests that a-orientation of the pro-C14
22% 9b-lanosta-7,24-dien-3b-ol. The synergetic effects of the methyl group is crucial for the substrate binding by the bacterial
H477N and I481V mutations have been explained as follows; SHC, just as in the case of the cyclization of squalene (C15 unit × 2)
the H477N/I481V double mutant relocates polarity to a position into hopene. Moreover, the analogue should be folded in
more favorable for lanosterol formation, and the decreased sterics chair–chair–chair–chair–boat–boat conformation to achieve the
allow the intermediate to rotate, moving C-9/C-8 toward the stereochemistry of the cyclization product. The cyclization
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compounds (98 and 99) were later identified as by-products.96 the exact mechanism and the stereochemistry of the cyclization
This unexpected result requires the formation of a 6.6.6.5 reaction still remains to be elucidated.
tetracyclic intermediate cation having either a 17a- or 17-b
side chain (cyclization reaction folded in all-chair conformation
4.3 Oxidosqualene : b-amyrin cyclase
produces a dammaranyl cation (100a) with a 17a-side chain,
while in chair–chair–chair–boat conformation yields a 17-epi- Since the historical proposal of the biogenetic isoprene rule
dammaranyl cation (100b) with a 17-b side chain; as described by Eschenmoser, Ruzicka, Arigoni, and Jeger in 1955,2,3 the
later, similar mechanisms are discussed for the biosynthesis of remarkable cyclization of (3S)-2,3-oxidosqualene into b-amyrin
tirucalla-7,24-dien-3b-ol, see Scheme 17), which in the original (105) has fascinated organic chemists for over a half century. The
work was considered to subsequently undergo transformation formation of b-amyrin is initiated in the chair–chair–chair–boat
into the final product via a sequence of two 1,2-hydride shifts conformation of (3S)-2,3-oxidosqualene, and the proton-initiated
and two 1,2-methyl migrations (H-17→20, H-13b→17b, CH3 - cyclization first produces the 6.6.6.5-fused tetracyclic dammarenyl
14a→13a, CH3 -8b→14b), followed by removal of the axial C-20 cation (101) (Scheme 11A). After D-ring expansion, an
H-7a to generate the D7 double bond of 97.94,95 Arigoni and electrophilic addition of the tetracyclic baccharenyl secondary
co-workers recently repeated the experiments using [7-2 H]- cation (102) on to the terminal double bond generates the lupanyl
and [11-2 H]-labeled isotopomers of 96, and confirmed that the tertiary cation (103) with a five-membered E-ring, which is
formation of 97 involves two consecutive 1,2-hydride shifts, followed by ring expansion to yield the oleanyl secondary cation
instead of a putative 1,3-hydride shift from C-13 to C-20, to (104). Finally, the oleanyl C-19 cation undergoes sequential 1,2-
achieve the 20R configuration of 97, just as in the case of the hydride shifts (H-18a→19, H-13b→18b) followed by elimination
formation of lanosterol from the protosteryl cation.96 However, of H-12a to yield the 6.6.6.6.6-fused pentacyclic ring system with
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functionally converted into b-amyrin synthase by replacement and lupan-3b,20-diol (116) (Scheme 15).106–108 The Ebizuka group
of a single amino acid residue L256W.101 On the other hand, has established that, during the biosynthesis of lupan-3b,20-diol,
recombinant lupeol synthase from Arabidopsis thaliana (LUP1, the water addition to the lupanyl C-20 cation by LUP1 takes place
At1g78970) has been shown to produce a mixture of lupeol, stereospecifically,108 while nonstereospecific deprotonation from
b-amyrin, germanicole, taraxasterol (139), w-taraxasterol (140), the terminal methyl groups produces lupeol (Scheme 12).100
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cloned and sequenced from seedlings of Cucurbita pepo.122 When example, in lanosterol formation, it will be of interest to know
expressed in a OSLC-deficient yeast strain, the transformant cell why the back-bone rearrangement takes place after the initial
accumulated 10a-cucurbita-5,24-diene-3b-ol (57). The postulated cyclization to the protosteryl cation. The relationship between
mechanism of cyclization of (3S)2,3-oxidosqualene proceeds cyclization mechanism and active-site structure of the various SC
through initial formation of protosteryl C-17 cation followed by and OSC enzymes, including the newly discovered seco-tritepene
a series of hydride and methyl shifts to generate the C-9 cation synthases, presents a formidable challenge. Finally, further analy-
as in the case of cyclization into lanosterol and cycloartenol. The ses of the catalytic potential and plasticity of functionally divergent
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cationic intermediate then undergoes transformation into the final cyclase enzymes promise to reveal intimate structural details of
product via a further methyl and hydride 1,2-shift (CH3 -10b→9b, the enzyme catalyzed processes, and suggest strategies for the
H-5a→10a) followed by elimination of H-6b to form the D5(6) dou- structure-based rational engineering of the enzyme proteins and
ble bond (Scheme 5). Cucurbitadienol synthase is closely related manipulating substrate and product specificities of the polyene
(65–70% identity at the amino acid level) to both cycloaretnol and cyclization reactions.
lanosterol synthases. Site-directed mutagenesis L488P and I489V
did not change the product specificity, suggesting that the role
of the active-site residue Ile489 in CAS is different from that of
7 Acknowledgements
cucurbitadienol synthase.122 The author expresses his appreciation to an excellent group of
Panax ginseng is one of the most famous oriental medicinal co-workers at Shizuoka whose contributions are cited in the
plants used as crude drugs in Asian countries. Dammarenediol- text, in particular Dr Hideya Tanaka, Dr Yuichi Sakano, and
II synthase, the first committed enzyme for the biosynthesis of Professor Hiroshi Noguchi. Financial support at Shizuoka has
sapogenin of dammarane type ginsenosides, has been successfully been provided by the PRESTO program from the Japan Science
cloned from hairy root cultures of P. ginseng by homology and Technology Agency, and Grant-in-Aid for Scientific Research
based PCR method.123 When expressed in the yeast system, the from the Ministry of Education, Culture, Sports, Science and
transformant cell accumulated (20S)-dammar-24-ene-3b,20-diol Technology, Japan. This contribution is dedicated to the memory
(133) as the sole cyclization product of (3S)-2,3-oxidosqualene, of Professor Guy Ourisson, a mentor who introduced the author
demonstrating that water addition to dammrenyl C-20 cation is to the mystique of the molecular evolution of the cyclase enzymes.
stereospecific (Scheme 15).
Finally, recently disclosed genomic information on the fungus
Aspergillus fumigatus led to identification of a gene cluster involved 8 References
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