SAASP - Pocket Guide To Antibiotic Prescribing For Adults in SA 2015
SAASP - Pocket Guide To Antibiotic Prescribing For Adults in SA 2015
SAASP - Pocket Guide To Antibiotic Prescribing For Adults in SA 2015
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Contents
Why
do
we
need
this
guide?
5
Principles
for
rational
antibiotic
prescribing
6
Interpreting
test
results
11
Correct
techniques
of
microbiological
sampling
13
Changing
antibiotics
15
Infection
prevention
16
Acute
upper
respiratory
tract
infection
20
Lower
respiratory
tract
infection
24
Intra-‐abdominal
infection
29
Acute
diarrhoea
31
Urinary
tract
infections
35
Sexually
transmitted
infections
40
Acute
meningitis
45
Peripheral
line
infection
48
Staphylococcus
aureus
bacteraemia
49
Skin
and
soft
tissue
infections
51
Bone
and
joint
infections
56
Prophylaxis
59
A
pocket
guide
to
antibiotic
prescribing
for
adults
in
South
Africa
2015
First
published
2014
©
Sean
Wasserman,
Tom
Boyles,
Marc
Mendelson
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GLOSSARY
Term
Definition
Antibiogram
A
list
of
antibiotics
to
which
a
cultured
bacterium
is
susceptible,
intermediate
or
resistant
BC
Blood
culture
BD
Twice
daily
Beta-‐lactam
antibiotic
Antibiotic
class
containing
a
beta-‐lactam
ring
that
inhibits
bacterial
cell
wall
synthesis.
Includes
penicillins,
cephalosporins
and
carbapenems
CA
Community-‐acquired
CAP
Community
acquired
pneumonia
Cleaning
solution
Antiseptic
for
hand
hygiene,
including
0.5%
chlorhexidine
in
70%
alcohol
and
iodine-‐based
solutions
Community-‐acquired
(CA)
infection
Illness
starts
prior
to,
or
within
48
hours
of
admission
CRB-‐65
score
A
clinical
prediction
rule
for
mortality
in
community-‐
acquired
pneumonia.
The
score
is
an
acronym
for
individual
risk
factors
as
follows:
Confusion
of
new
onset
Respiratory
rate
≥
30
breaths
per
minute
Blood
pressure
<
90
mmHg
systolic
or
<
60
diastolic
65
years
or
older
A
single
point
is
assigned
to
each
risk
factor.
CRE
Carbapenem
resistant
Enterobacteriaceae
CXR
Chest
X-‐ray
eGFR
Estimated
glomerular
filtration
rate
ESBL
Extended
spectrum
beta
lactamase
producing
organism
Health
care
associated
infection
(HCAI)
Any
patient
with
a
new
infection
starting
≥
48
hours
after
admission
and
was
not
apparent
at
the
time
of
admission,
or
any
catheter
or
line-‐associated
infection
irrespective
of
time
of
insertion.
The
following
factors
increase
risk:
• Admission
to
an
acute
care
hospital
within
90
days
of
the
current
presentation
• Resident
of
a
nursing
home
or
long-‐term
care
facility
• Recent
intravenous
antibiotic
therapy,
chemotherapy
or
wound
care
within
the
past
30
days
of
the
current
presentation
• Patients
attending
a
haemodialysis
clinic
HCAP
Health
care
associated
pneumonia
IPC
Infection
prevention
and
control
im
Intramuscular
injection
iv
Intravenous
MRSA
Methicillin
resistant
Staphylococcus
aureus
MSSA
Methicillin
sensitive
Staphylococcus
aureus
po
Per
os
(oral)
Rx
Treatment/therapy
TOE
Trans-‐oesophageal
echocardiogram
TTE
Trans-‐thoracic
echocardiogram
VRE
Vancomycin
resistant
enterococci
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Disclaimer
This
document
is
provided
as
an
information
resource
for
all
health
care
workers
to
assist
in
the
appropriate
prescribing
of
antibiotics.
It
attempts
to
summarise
relevant
information
for
clinicians
from
South
African
and
International
guidelines
as
well
as
reference
to
textbooks,
key
publications
and
expert
opinion.
Recommendations
change
rapidly
and
opinion
can
be
controversial.
The
authors
do
not
warrant
that
the
information
contained
in
this
booklet
is
complete
and
shall
not
be
liable
for
any
damages
incurred
as
a
result
of
its
use.
Acknowledgements
We
would
like
to
acknowledge
the
following
colleagues
who
provided
input
during
the
editing
phase
of
this
book:
Dr
Adrian
Brink,
Prof
Alan
Karstaedt,
Prof
Andrew
Whitelaw,
Prof
Andries
Gous,
Ms
Andriette
van
Jaarsveld,
Prof
Andy
Parish,
Dr
Cloete
van
Vuuren,
Dr
Colleen
Bamford,
Dr
Dena
van
den
Bergh,
Prof
Guy
Richards,
Prof
Gary
Maartens,
Dr
Ivan
Joubert,
Dr
James
Nuttall,
Sr
Lesley
Devenish,
Prof
Olga
Perovic.
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Chapter
1
Why
do
we
need
this
guide?
The
international
community
sits
at
the
tipping
point
of
a
post-‐antibiotic
era,
where
common
bacterial
infections
are
no
longer
treatable
with
the
antibiotic
armamentarium
that
exists.
In
South
Africa,
the
identification
of
the
first
case
of
pan-‐
resistant
Klebsiella
pneumoniae
(Brink
et
al,
J
Clin
Microbiol.
2013;51(1):369-‐72)
marks
a
watershed
moment
and
highlights
our
tip
of
the
antibiotic
resistance
‘iceberg’
in
this
country.
Multi-‐drug
resistant
(MDR)-‐bacterial
infections,
predominantly
in
Gram-‐negative
bacteria
such
as
Klebsiella
pneumoniae,
Escherichia
coli,
Pseudomonas
aeruginosa
and
Acinetobacter
baumannii
are
now
commonplace
in
South
African
hospitals.
Whilst
a
number
of
expensive
new
antibiotics
for
Gram-‐
positive
bacterial
infections
have
been
manufactured
recently
(some
of
which
are
licenced
for
use
in
South
Africa),
no
new
antibiotics
active
against
Gram-‐negative
infections
are
expected
in
the
next
10-‐15
years.
Hence
what
we
have
now,
needs
conserving.
The
development
of
antibiotic
resistance
is
a
natural
phenomenon.
Drug-‐resistance
mutations
have
been
found
in
30,000-‐year
old
ice
blocks.
In
addition,
bacteria
may
acquire
antibiotic
resistance
mechanisms
by
horizontal
gene
transfer.
There
are
over
1000
different
naturally
occurring
enzymes
that
are
produced
by
different
bacteria,
which
inactivate
antibiotics.
The
overuse
of
antibiotics
is
driving
the
selection
of
antibiotic
resistance.
Given
the
right
circumstances,
the
resistant
bacteria
that
are
selected
out
can
either
colonize
a
patient
(be
present,
potentially
transmissible,
but
not
cause
clinical
disease
i.e.
infection)
or
cause
infection.
It
follows
that
the
more
antibiotics
are
used,
the
greater
the
likelihood
of
selecting
out
antibiotic
resistance,
and
the
broader
the
spectrum
of
antibiotic
that
is
used,
the
greater
the
number
of
different
types
of
resistant
bacteria
will
be
selected
out.
The
fact
that
it
is
estimated
that
half
of
all
antibiotics
prescribed
in
human
health
are
unnecessary
e.g.
for
viral
upper
respiratory
tract
infections,
demands
our
renewed
efforts
to
make
antibiotic
prescribing
appropriate.
When
it
is
indicated,
an
antibiotic
must
be
the
right
choice
at
the
right
dose,
dosing
interval
and
route,
and
for
the
right
duration,
and
when
it
is
not
indicated,
that
antibiotic
must
not
prescribed.
Rather
than
be
an
exhaustive
text
on
infectious
diseases,
microbiology
or
clinical
pharmacology,
the
aim
of
this
guide
is
to
give
you
the
practical
information
you
need
to
perform
antibiotic
stewardship
in
an
algorithmic
manner,
which
mimics
the
day-‐
to-‐day
experience
of
the
prescriber.
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Chapter
2
Principles
for
rational
antibiotic
prescribing
1. Decide
if
an
antibiotic
is
indicated:
does
the
patient
have
a
bacterial
infection?
Targeted
refers
to
specimen
from
site
of
infection
e.g.
urine
for
cystitis
2. Perform
cultures
before
administering
antibiotics
in
hospitalised
patients
or
in
outpatients
with
recurrent
infections
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5. Start
the
appropriate
antibiotic
rapidly
in
severe
infections
Mortality
increases
by
8%
for
every
hour
antibiotic
administration
is
delayed
in
septic
shock1
6. Practice
early
and
effective
source
control
Search
for
and
remove
any
persistent
foci
of
infection
7. Evaluate
antibiotic
appropriateness
every
day
1
Kumar
et
al.
Crit
Care
Med.
2006
Jun;34(6):1589-‐96.
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Chapter
3
Interpreting
test
results
Non
culture-‐based
tests
Non
culture-‐based
tests
such
as
urinary
dipstick,
peripheral
white
cell
count
(WCC),
and
C-‐reactive
protein
(CRP)
confirm
the
presence
of
inflammation
when
positive
but
do
not
differentiate
bacterial
from
non-‐bacterial
causes.
However,
presence
of
nitrites
on
urine
dipstick,
high
neutrophil
count
with
left-‐shift
and
CRP
>100
mg/ml
all
suggest
bacterial
infection.
Negative
results
are
generally
good
at
excluding
inflammation
and
therefore
bacterial
infection.
Procalcitonin
(PCT)
is
more
specific
for
bacterial
infection
than
CRP
or
WCC
but
10
times
more
expensive.
There
is
high
quality
evidence
for
its
use
in
a
limited
number
of
infections
and
its
use
should
be
limited
to
these
indications.
Specifically,
low
PCT
safely
excludes
bacterial
infection
such
that
antibiotics
can
be
withheld
in
meningitis,
and
acute
exacerbations
of
chronic
obstructive
pulmonary
disease
(see
later
sections
for
details).
PCT
has
no
value
in
differentiating
bacterial
infection
from
tuberculosis
and
has
very
limited
value
in
sepsis.
Its
price
generally
excludes
its
use
in
serial
measurement
to
determine
when
to
stop,
although
some
evidence
in
ICU
settings
alone,
exist.
Cultures
Does
this
positive
culture
represent
infection,
colonisation
or
contamination?
Infection
=
the
presence
of
one
or
more
microorganisms
with
an
inflammatory
response
Colonisation
=
the
presence
of
microorganisms
without
significant
inflammation.
Contamination
=
A
culture
that
contains
a
microorganism(s)
that
did
not
originate
from
the
intended
anatomical
site
Sterile
sites
Normally
sterile
sites
are
CSF,
lungs
(below
the
glottis),
urinary
tract,
biliary
tract,
and
blood.
Bacteria
cultured
from
these
sites
are
likely
to
be
causing
infection
but
still
sometimes
represent
colonisation
or
contamination.
Finding
bacteria
in
a
sterile
site
is
abnormal
but
may
represent
infection,
or
contamination.
Organisms
colonizing
skin
such
as
coagulase-‐negative
staphylococci
may
cause
contamination
of
sterile
sites.
Colonisation
of
urinary
tract
can
occur
without
causing
infection.
If
the
organism
corresponds
with
the
clinical
scenario
then
this
should
be
considered
to
be
causing
infection
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Non-‐sterile
sites
Non-‐sterile
specimens
include
sputum
(as
it
must
pass
through
the
mouth),
pus
swabs
from
skin,
GI
tract
and
vagina.
Specimens
from
these
sites
are
expected
to
culture
bacteria
(unless
growth
is
inhibited
by
laboratory
techniques).
Interpretation
therefore
depends
on
the
organism(s)
being
compatible
with
the
clinical
scenario.
Cultures
from
non-‐sterile
sites
are
often
much
harder
to
interpret
and
usually
of
less
value.
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Chapter
4
Correct
techniques
of
microbiological
sampling
Optimal
sampling
is
very
important
to
increase
yields
and
decrease
contamination
rates
(see
boxes
below).
Surgical
specimens
from
abnormal
structures
such
as
abscesses
should
usually
be
collected
at
the
time
of
operation.
Once
surgical
drains
are
placed
they
quickly
become
colonised
with
skin
and
environmental
bacteria
and
culture
results
are
not
interpretable.
Pus
swabs
collected
outside
of
theatre
are
discouraged,
as
it
is
extremely
rare
for
them
to
yield
information
that
will
change
patient
management.
Box
1.
Correct
technique
for
collecting
mid-‐stream
urine
specimens
Instructions
for
collection
of
urine
specimens
Females
• Wash
your
hands
• Clean
the
vulva
front
to
back
with
sterile
gauze
and
sterile
water
• Spread
labia
with
fingers
• Void
and
collect
urine
mid-‐flow
Males
• Wash
your
hands
• Retract
foreskin
and
wash
glans
with
sterile
gauze
and
sterile
water
• Void
and
collect
urine
mid-‐flow
Box
2.
Correct
technique
for
collecting
urine
specimens
from
a
catheter
• Use
aseptic
technique
with
sterile
gloves
and
apron
• Clamp
tubing
just
distal
to
sampling
port
• Wait
for
urine
to
collect
above
clamp
• Wipe
sampling
port
with
cleaning
solution
• Remove
urine
with
a
small
gauge
sterile
needle
and
syringe
Transfer
ufrine
Box
3•
–
Technique
to
sterile
or
taking
container
a
pus
swab
• Clean
p ort
a gain
• Unclamp
tubing
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Chapter
5
Changing
Antibiotics
Once
antibiotics
have
been
initiated
the
decision
to
change
or
stop
therapy
depends
on
the
patient’s
clinical
response
and
culture
results
(see
algorithm).
Abx
=
Antibiotics,
BSA
=
Broad
spectrum
antibiotics
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Chapter
6
Infection
prevention
The
most
important
tools
to
prevent
spread
of
infection
are
hand
hygiene
and
contact
precautions.
Correct
management
of
IV
lines
and
urinary
catheters
are
essential
for
reducing
hospital-‐acquired
infections.
Hand
hygiene
WHEN:
HOW:
Use
alcohol-‐based
solutions
for
routine
hand
decontamination.
Indications
for
soap
and
water:
• Hands
visibly
dirty
• Hands
contaminated
with
body
fluids
• After
using
the
restroom
or
eating
• Exposure
Clostridium
difficile
Indications
for
gloves:
• Patient
interactions
that
involve
exposure
to
blood,
mucous
membranes
or
non-‐intact
skin
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• Suspected
or
proven
C.
difficile
Always
wash
hands
after
glove
use
Contact
precautions
These
should
be
implemented
for
any
patient
infected
by
or
colonised
with
a
drug-‐
resistant
bacterial
pathogen
other
than
tuberculosis
(which
requires
airborne
precautions
to
prevent
small
droplet
spread).
Contact
precautions
involve
the
following:
1. Clear
signage
indicating
that
contact
precautions
are
in
place
2. Patient
preferably
placed
in
isolation
3. Hand
disinfection
prior
to
patient
contact
4. Mandatory
use
of
apron
and
gloves
when
entering
the
patient’s
room,
before
any
contact
with
the
patient
or
their
surroundings
and
during
examination
5. Remove
apron
first,
followed
by
gloves
6. Hand
disinfection
after
disposal
of
apron
and
gloves
(use
soap
and
water
for
C.
difficile
exposure)
7. Contact
precautions
remain
in
place
even
after
treatment
with
antibiotics
and
for
every
hospital
or
nursing
care
re-‐admission
for
a
period
of
6
months.
For
patients
with
C.
difficile
associated
diarrhoea
contact
precautions
can
be
withdrawn
after
completion
of
treatment
and
resolution
of
diarrhoea.
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Every
time
you
see
a
patient
you
should
be
asking
the
questions:
1. Can
I
stop
or
de-‐escalate
antibiotics?
2. Can
I
remove
this
urinary
catheter?
3. Can
I
remove
this
IV
line?
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Chapter
7
Acute
Upper
Respiratory
Tract
Infection
Over-‐prescribing
of
antibiotics
for
upper
respiratory
tract
infection
(URTI)
is
a
major
driver
of
bacterial
resistance
in
the
community.
URTI
comprises
three
clinical
syndromes
depending
on
the
site
of
infection;
pharyngotonsillitis
(sore
throat),
acute
otitis
media,
and
acute
bacterial
sinusitis.
Acute
pharyngotonsillitis
(sore
throat)
Typical
appearance
of
viral
pharyngitis
Typical
appearance
of
bacterial
pharyngitis
Definition
• Acute
inflammation
of
the
pharyngeal
wall
and
tonsils.
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Likely
pathogens
• Commonly
respiratory
viruses
and
Epstein-‐Barr
virus.
Around
5-‐30%
caused
by
group
A
β-‐haemolytic
streptococci
(GABHS)
(S.
pyogenes).
• Viral
and
bacterial
acute
pharyngitis
are
self-‐limiting,
including
those
caused
by
GABHS,
hence,
the
primary
reason
for
considering
antibiotic
therapy
is
to
prevent
Acute
Rheumatic
Fever
(ARF)
Clinical
features
• Sore
throat
• It
is
possible
to
differentiate
bacterial
from
viral
causes
on
clinical
grounds.
Penicillin
allergy
Azithromycin
500
mg
po
daily
for
3
days
Acute
otitis
media
Definition
Acute
inflammation
of
the
middle
ear
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Typical
appearance
of
acute
otitis
media
Likely
pathogens
• Haemophilus
influenza,
Streptococcus
pneumoniae,
Moraxella
catarrhalis
Clinical
features
• Ear
pain
and
decreased
hearing
• Reddened
and
bulging
tympanic
membrane,
which
may
be
draining
pus.
Tests
• None
required
Treatments
• Initially
analgesics
and
decongestants
only
• Antibiotics
if
febrile
or
symptoms
do
not
settle
within
48
hrs
First
line
Amoxicillin
1g
po
8-‐hourly
for
5
days
Alternative
in
beta-‐lactam
allergic
patients
Azithromycin
500
mg
po
daily
for
3
days
Acute
bacterial
sinusitis
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Definition-‐
Acute
bacterial
infection
of
para-‐nasal
sinuses
Likely
pathogens-‐
Haemophilus
influenzae,
Streptococcus
pneumoniae,
Moraxella
catarrhalis
Clinical
features
• Often
preceded
by
a
viral
URTI
• Fever,
facial
tenderness,
dental
tenderness,
nasal
discharge,
nasal
congestion
and
anosmia.
Tests
• Usually
none
• If
failure
of
initial
therapy
a
CT
scan,
fibre-‐optic
endoscopy
with
aspiration
and
culture
of
pus
may
be
necessary
Treatments
• Symptomatic
treatment:
paracetamol,
decongestant,
nasal
steroids
perform
better
than
antibiotics
• Antibiotics
should
be
prescribed
if
any
of
the
following
are
present-‐
o Symptoms
lasting
>
10
days
o Fever
>39oC
o Purulent
discharge
o Facial
pain
o Biphasic
illness
with
sinusitis
following
typical
viral
URTI
First
line
Amoxicillin
1g
8
hourly
for
5
days
po
Alternative
for
beta-‐lactam
allergy
Azithromycin
500
mg
po
daily
for
3
days
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Chapter
8
Lower
Respiratory
Tract
Infection
Acute
bronchitis
Definition
Self-‐limited
inflammatory
process
involving
large
and
mid-‐sized
airways
Common
aetiologies
• Respiratory
viruses
(>
90%)
– Influenza
– Parainfluenza
3
– Respiratory
syncytial
virus
– Human
metapneumovirus
• Non-‐viral
(<10%)
– Suspect
if
prolonged
cough,
longer
incubation
period,
local
outbreaks
§ Mycoplasma
pneumoniae
§ Chlamydia
pneumoniae
§ Bordetella
pertussis
– No
association
with
S.
pneumoniae
or
H.
influenzae
in
patients
without
evidence
of
underlying
lung
disease
Tests
No
investigations
are
required
in
the
vast
majority
of
cases:
• Gram
stain
not
recommended
• Nasopharyngeal
swab
for
influenza
PCR
not
recommended
for
uncomplicated
influenza-‐like
illness
Diagnosis
and
management
*Chest
X-‐rays
are
not
necessarily
indicated
for
all
patients
with
acute
bronchitis
and
should
be
performed
only
if
likely
to
influence
management
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25
|
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Prevention
• Annual
influenza
vaccine
recommended
for
all
patients
with
COPD
• Pneumococcal
polysaccharide
(PPSV23)
vaccine
is
recommended
for
all
individuals
over
65
years
of
age
and
anyone
with
COPD
• Antiviral
chemoprophylaxis
is
not
recommended
Pneumonia
26
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Definition
Pneumonia
is
acute
infection
of
lung
parenchyma
distal
to
the
terminal
bronchiole
and
causes
consolidation.
Common
aetiologies
of
community
acquired
or
health
care
associated
pneumonia
CAP
HCAP
Agent
Comments
Increased
risk
for
infection
with
S.
pneumoniae
Most
common
cause
MDR
pathogens
H.
influenzae
More
common
in
COPD
Tuberculosis
More
common
in
HIV
– Similar
organisms
to
CAP
‘Atypical
organisms’
Not
cultured
o Uncommonly
– M.
pneumoniae
No
specific
clinical/
legionella
or
viruses
– Chlamydophilia
radiological
features
– Gram
negative
bacilli
– Legionella
spp.
Suspect
if
risk
factors
or
o P.
aeruginosa
non-‐response
to
beta-‐ o A.
baumanii
lactams
o Enterobacteriaciae
Oral
anaerobes
Risk
factors:
alcoholism,
– S.
a ureus
(including
MRSA)
aspiration,
lung
abscess
P.
jirovecii
HIV,
bilateral
infiltrates,
desaturation
on
minimal
exertion,
poor
response
to
beta-‐lactams
Respiratory
viruses
Seasonal
Risk
factors:
pregnancy,
elderly,
co-‐morbidities
Tests
CAP
HCAP
Only
perform
if
likely
to
influence
empiric
Always
send
specimens
prior
to
management
decisions
initiation
of
empiric
antibiotics
Mild
(CRB-‐65
score
≤
2)
In
all
cases
• Sputum
culture
and
Xpert
MTB/Rif
if
• Blood
culture
failed
outpatient
Abx
therapy
• Sputum
Gram
stain
and
culture
Severe
(CRB-‐65
≥
3)
or
co-‐morbidities*
• Sputum
Gram
stain
and
culture
• Blood
culture
• Sputum
for
P.
jirovecii
DFAT
if
HIV
+ve
• Urine
Legionella
antigen
testing
• NP
swab
for
influenza
PCR
if
flu
season
NP
=
Nasopharyngeal,
DFAT
=
direct
fluorescent
antibody
test
*
Chronic
cardio-‐pulmonary
disease,
alcoholics,
immune
suppression
(excluding
HIV),
CKD,
cirrhosis
Diagnosis
and
management
27
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Special
circumstances
2. Health
care
associated
pneumonia
– Send
blood
and
sputum
cultures
prior
to
initiating
broad
spectrum
antibiotics
– Consult
microbiologist
or
infectious
diseases
specialist
about
choice
of
appropriate
empiric
antibiotic
3. Penicillin
allergy
– Moxifloxacin
400
mg
po/iv
daily
or
levofloxacin
500mg
po
12-‐hourly
(750mg
iv
12-‐hourly
in
severe
pneumonia)
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Chapter
9
Intra-‐abdominal
infection
Definitions
and
causes
Infections
in
the
abdomen
can
be
divided
into
the
following
main
groups:
1. Infections
of
the
biliary
system,
including
cholecystitis
and
cholangitis
2. Infections
of
the
bowel,
including
appendicitis
and
diverticulitis
3. Intra-‐abdominal
collections
or
abscesses
4. Peritonitis,
including
bowel
perforations
and
spontaneous
bacterial
peritonitis
(SBP)
related
to
liver
disease
Common
aetiologies
Empiric
antibiotic
therapy
for
community-‐acquired
intra-‐abdominal
infections
should
cover
all
of
the
following
organisms:
• Enteric
gram-‐negative
bacilli:
E.
coli,
K.
pneumoniae
• Anaerobic
organisms
• Enteric
streptococci
Other
possible
causes
in
health
care-‐associated
infections
or
severely
ill
patients
include:
• Enterococci
• Candida
• MRSA
Tests
Most
cases
will
require
abdominal
imaging
(either
ultrasound
or
CT),
unless
there
is
a
clear
indication
for
urgent
laparotomy.
• Blood
culture
is
recommended
for
patients
with
sepsis
syndrome
and
suspected
intra-‐abdominal
infection.
• Culture
of
infected
material
is
generally
not
helpful
but
is
recommended
in
the
following
situations:
o HCAI
o SBP
o Infections
with
incomplete
source
control
(e.g.
inability
to
clear
liver
abscess)
o Re-‐do
laparotomies
Diagnosis
and
management
1. Spontaneous
bacterial
peritonitis
Diagnosis:
• Ascitic
fluid
aspirate
with
WCC
>
250
cells/mm3
• Positive
ascitic
fluid
culture
(low
sensitivity;
high
specificity
if
sample
taken
properly)
Management:
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Alternative
antibiotic
regimens
• Co-‐amoxiclav
unavailable:
o Ampicillin
1
g
iv
6
hourly
PLUS
gentamicin
6
mg/kg/day
PLUS
metronidazole
500
mg
iv
8-‐HOURLY
OR
o Ceftriaxone
1
g
daily
PLUS
metronidazole
500
mg
8-‐hourly
• Severe
Penicillin
allergy:
o Ciprofloxacin
400
mg
iv
8-‐hourly
PLUS
metronidazole
500
mg
iv
8-‐hourly
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Chapter
10
Acute
diarrhoea
Definition
Diarrhoea
for
<
2
weeks
duration
Likely
pathogens-‐
• Viruses
(norovirus,
rotavirus,
adenoviruses,
astrovirus),
• Bacteria
(Salmonella,
Campylobacter,
Shigella,
Enterotoxigenic
E.
coli,
C.
difficile)
and
bacterial
toxins
• Protozoa
(Cryptosporidium,
Giardia,
Cyclospora,
Entamoeba)
Clinical
features
• Stool
taking
the
shape
of
its
container
>
3
times
per
day
• Blood
in
stool
• Fever
History
• Food
exposure
• Illness
among
close
contacts
• Recent
travel
• HIV
status
• Recent
antibiotics
Tests
(see
algorithm)
The
vast
majority
of
episodes
of
diarrhoea
DO
NOT
require
antibiotics.
Mild
cases
are
usually
self-‐limiting
and
require
symptomatic
treatment
only.
Moderate
to
severe
cases
require
investigation
+/-‐
hospitalisation.
Diagnosis
and
management
31
|
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Treatments
• Empiric:
o Ciprofloxacin
500
mg
po
12-‐hourly
for
3
days
pending
results
of
culture
and
sensitivity
o If
bloody
diarrhoea
add
empiric
metronidazole
500
mg
iv
8-‐hourly
(or
400
mg
po
8-‐hourly)
for
5
days
• Definitive:
o Based
on
culture
results
• Clostridium
difficile
toxin
or
molecular
test
positive:
o See
algorithm
o Resolution
of
symptoms
generally
occurs
within
5-‐7
days,
but
it
is
not
unusual
for
symptoms
to
persist
for
the
first
3-‐5
days
o 25%
of
patients
with
C.
difficile
will
relapse
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|
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Chapter
11
Urinary
tract
infections
Uncomplicated
UTI
Definition
‘Uncomplicated’
refers
to
either
a
lower
urinary
tract
infection
or
upper
urinary
tract
infection
(pyelonephritis)
in
non-‐pregnant
women
with
structurally
and
neurologically
normal
genitourinary
tracts.
Acute
uncomplicated
cystitis
is
defined
as:
• Symptomatic
bladder
infection
characterised
by
a
clinical
syndrome
of
frequency,
urgency,
dysuria
or
suprapubic
pain
Common
aetiologies
Pathogens
Common
contaminants
of
urine
cultures
• Enterobacteriaceae
• Candida
species
– E.
coli
(most
common)
• Enterococcus
spp.
– K.
pneumoniae
• Gardnerella
vaginalis
– Enterobacter
spp.
• Mycoplasma
hominus
– Proteus
spp.
• Ureaplasma
urealyticum
• Coagulase
negative
staphylococci
– S.
saprophyticus
• Group
B
streptococcus
• Enterococcus
spp.
Tests
– Urine
culture
only
for:
o Reinfection,
persistent
or
recurrent
cystitis
o Symptoms
with
negative
dipstick
– Do
not
perform
follow-‐up
cultures
if
symptoms
have
resolved
– Do
not
perform
screening
cultures
in
asymptomatic
diabetics,
elderly
or
patients
with
indwelling
urinary
catheters
Diagnosis
and
management
The
diagnosis
of
urinary
tract
infection
requires
the
presence
of
compatible
symptoms
plus
bacteriuria
(bacteria
in
the
urine)
or
indirect
evidence
of
infection,
such
as:
• Urine
dipstick
leucocyte
esterase
or
nitrite
positive
• Urine
microscopy
showing
>
1+
leucocytes
Asymptomatic
bacteriuria
(a
positive
urine
culture
from
patients
without
symptoms
referable
to
the
urinary
tract)
should
not
be
treated,
except
in
pregnant
women
and
prior
to
invasive
urological
procedures.
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|
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Pyelonephritis
35
|
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Complicated
UTI
Definitions
A
symptomatic
urinary
tract
infection
in:
• Individuals
with
functional
or
structural
abnormalities
of
the
genitourinary
tract
• Men
• Pregnant
women
• Patients
with
indwelling
urinary
catheters
Common
infectious
aetiologies
Caused
by
the
same
pathogens
as
uncomplicated
UTIs.
Infections
in
patients
with
indwelling
urinary
catheters
more
likely
to
be
caused
by
drug
resistant
organisms.
Tests
Perform
urine
cultures
in
all
of
the
above
patient
groups
presenting
with
symptoms
of
UTI.
In
catheterised
patients
urine
specimens
should
be
obtained
after
catheter
removal
from
a
freshly
placed
catheter
or
voided
midstream
sample.
If
fever/symptoms
persist
>
48
hours:
– Perform
blood
culture
(in
case
of
resistant
bacteria)
– Image
the
urinary
tract
and
abdomen
to
exclude
collections
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Catheter-‐associated UTI
NB:
non-‐specific
signs
of
CA-‐UTI
include
fever
or
rigors,
altered
mental
state
and
unexplained
lethargy
37
|
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UTI
in
pregnancy
i.
Asymptomatic
bacteriuria
Pregnant
women
with
asymptomatic
bacteriuria
are
at
increased
risk
of
developing
pyelonephritis.
Therefore
all
pregnant
women
should
be
screened
for
bacteriuria.
Diagnosis:
• Any
culture
showing
≥
103
cfu/ml
of
a
single
organism
(or
any
E.
coli)
in
an
asymptomatic
pregnant
woman
Management:
• Appropriate
oral
antibiotic
for
5
days
(see
below)
• Perform
follow-‐up
urine
culture
to
confirm
sterility
ii.
Cystitis
and
pyelonephritis
Diagnosis:
• As
per
uncomplicated
UTI
guidelines
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|
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Chapter
12
Sexually
transmitted
infections
Vaginal
discharge
Definitions
Vaginal
and
occasionally
cervical
infection
characterised
by
discharge,
itching
or
odour.
Common
aetiologies
• Bacterial
vaginosis
(BV):
replacement
of
normal
flora
by
polymicrobial
overgrowth
• Trichomoniasis:
T.
vaginalis
• Candidiasis:
Candida
albicans
• Cervicitis:
C.
trachomatis
and
N.
gonorrhoeae
Tests
No
tests
are
necessary
to
confirm
specific
causes
at
the
initial
presentation.
For
recurrent
or
persistent
symptoms,
attempt
to
confirm
diagnosis
by
office
tests:
• Bacterial
vaginosis
– Clue
cells
on
microscopy
– pH
of
vaginal
fluid
>
4.5
– Whiff
test:
fishy
odour
after
addition
of
KOH
to
vaginal
fluid
• Trichomoniasis
– Wet
prep
slide
to
visualise
motile
organisms
(sensitivity
70%)
• Candidiasis
– Wet
prep
slide
with
KOH
demonstrating
yeasts
and
pseudohyphae
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|
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Penicillin
allergy
(severe)
Omit
ceftriaxone
and
increase
azithromycin:
2
g
po
single
dose
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|
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Urethritis
Definition
Urethral
inflammation
from
infectious
and
non-‐infectious
causes
Common
aetiologies
• Gonococcal
urethritis
(N.
gonorrhoeae)
• Non-‐gonococcal
urethritis
(NGU)
– Chlamydia
(C.
trachomatis)
• Non-‐chlamydial
NGU:
usually
no
pathogen
found
Tests
Usually
requires
no
special
investigations.
Diagnosis
and
management
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|
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Genital
ulcer
syndrome
(GUS)
Definition
New
genital,
anal
or
perianal
lesion
after
recent
sexual
activity.
Common
aetiologies
Sexually
transmitted
• HSV
and
syphilis
most
common
• H.
ducreyi
(chancroid)
• C.
trachomatis
(LGV)
Non-‐sexually
transmitted
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|
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|
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Chapter
13
Acute
meningitis
Definition
• Acute
inflammation
of
the
meninges
of
<7
days
duration.
Likely
pathogens
• Common
–
Various
bacteria,
viruses.
TB
meningitis
can
present
acutely.
Rare
-‐
fungi,
protozoa
and
helminths
• Common
bacterial
pathogens
are
Streptococcus
pneumoniae,
Neisseria
meningitidis,
Haemophilus
influenzae
and
Listeria
monocytogenes
(in
immunocompromised
and
elderly
patients).
Clinical
features
• Any
2
of
the
4
cardinal
features;
headache,
fever
>
37.5oC,
neck
stiffness
and
altered
mental
status
• Supporting
features
are
photophobia,
blanching
or
purpuric
rash
and
vomiting
Tests
• See
algorithm
for
lumbar
puncture
and
CT
brain
45
|
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Management
General
principles:
• Patients
with
suspected
bacterial
meningitis
should
receive
ceftriaxone
2
g
iv
immediately.
The
dose
for
continued
treatment
is
2
g
iv
12-‐hourly
• Penicillin
allergy
is
not
a
contra-‐indication
to
use
of
ceftriaxone,
unless
the
allergy
was
life
threatening
• Blood
culture
and
lumbar
puncture
should
be
performed
before
administration
of
antibiotics
ONLY
if
this
does
not
cause
significant
delay
• If
bacterial
meningitis
is
strongly
suspected
on
the
basis
of
clinical
and
CSF
findings
and
all
cultures
are
negative
give
ceftriaxone
for
10
days
• Steroids
are
not
recommended
Specific
therapy:
• S
pneumoniae:
duration
10
days
– If
MIC
unknown
or
>
0.1
microg/ml:
ceftriaxone
2
g
iv
12-‐hourly
– If
MIC
<
0.1
microg/ml:
penicilin
G
4
mU
ivi
4-‐hourly
or
ampicillin
2
g
iv
4-‐hourly
• N
meningitidis:
duration
7
days
– Ceftriaxone
2
g
iv
12-‐hourly
• L
monocytogenes:
duration
21
days
– Ampicillin
2
g
iv
4-‐hourly
• Gram-‐negative
infection:
duration
21
days
– Community-‐acquired:
cefepime
2
g
iv
8-‐hourly
or
ceftazidime
2
g
iv
8-‐
hourly
– Health
care
associated:
meropenem
2
g
iv
8-‐hourly
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|
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47
|
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Chapter
14
Peripheral
line
sepsis
Peripheral
line-‐related
infections
increase
morbidity,
mortality,
antibiotic
usage
and
length
of
stay.
PREVENTION
BY
EARLY
REMOVAL
OF
LINES
IS
THE
KEY
INTERVENTION.
By
definition
these
are
healthcare
associated
infections
(HCAI)
with
a
high
risk
of
resistant
pathogens.
Likely
pathogens
Staphylococcus
aureus
(MSSA/MRSA),
Coagulase
negative
staphylococci,
Streptococcus
spp.
Diagnosis
and
management
48
|
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Chapter
15
Staphylococcus
aureus
bacteraemia
Staphylococcus
aureus
(S.
aureus)
bloodstream
infection
carries
a
high
mortality
rate.
It
is
commonly
introduced
by
vascular
line
infections
or
other
health-‐care
associated
interventions,
but
can
result
from
invasive
S.
aureus
at
any
site.
S.
aureus
bacteraemia
can
disseminate
to
any
organ
including
heart
valves,
bone
and
lungs,
and
therefore
requires
prolonged
intravenous
therapy
with
higher
doses
of
appropriate
antibiotics.
– Measure
trough
levels
before
the
4th
dose
and
aim
for
a
target
of
15
–
20
mg/L
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|
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Management
Clinical
features
of
complicated
S.
aureus
bacteraemia
include
persistent
fever,
bone
pain,
new
murmur
or
peripheral
manifestations
of
endocarditis
or
focal
neurological
signs.
Patients
with
these
problems
require
directed
investigations
for
source
control
and
should
be
discussed
with
an
infectious
diseases
specialist.
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|
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Chapter
16
Skin
and
soft
tissue
infections
Cellulitis
Definition
Acute
infection
involving
skin
and
subcutaneous
tissue
• Commonly
precipitated
by
minor
trauma
or
underlying
skin
lesion
Diagnosis
(Image:
http://treatmentofcellulitis.net)
Clinical
only:
• Redness,
tenderness,
local
heat,
non-‐raised
edges
Differentiate
from:
Infections
Non-‐infectious
Erysipelas
DVT
Necrotising
fasciitis
Insect
bites
Gas
gangrene
Fixed
drug
reaction
Common
aetiologies
• Streptococci
(usually
S.
pyogenes)
• S.
aureus
Tests
None
recommended
• Blood
cultures
are
rarely
positive
and
not
generally
helpful
unless
extensive
or
severe
infection.
• Superficial
pus
swabs
are
not
helpful
and
should
NOT
be
performed
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Management
Cutaneous
abscess
Definition
Deep
inflammatory
nodule
extending
into
subcutaneous
tissue
that
develops
from
preceding
folliculitis
Common
aetiologies
S.
aureus
Tests
None
Management
All
cases
require
surgical
drainage.
Uncomplicated
cases
• No
antibiotics
required
Complicated
cases
(surrounding
cellulitis,
located
on
face,
systemic
symptoms)
• Flucloxacillin
500
mg
po
6-‐hourly
for
5
days
or
co-‐amoxiclav
1g
po
12-‐hourly
• In
penicillin
allergy
use
clindamycin
450
mg
po
8
hourly
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Diabetic
foot
Definition
Chronic
foot
infections
in
diabetics
• Mild:
limited
to
skin/superficial
subcutaneous
tissue
<
2
cm
beyond
ulcer
margin
• Moderate:
cellulitis
>
2
cm,
deep
fascial
involvement,
gangrene,
abscess,
osteomyelitis
• Severe:
systemic
complications
Common
aetiologies
• Mild
infections
or
previously
untreated
– S.
aureus
– Streptococci
• Chronic
lesions
or
previously
treated
– Above
plus
– Enterobacteriaceae
• Chronic,
refractory
or
prolonged
broad
spectrum
antibiotics
– Above
plus
– Pseudomonas
– Anaerobes
– Enterococci
Tests
None
required
in
mild
or
previously
untreated
infections.
Tissue
cultures
are
recommended
in
all
other
scenarios.
It
is
essential
to
clean
and
debride
the
lesion
before
obtaining
specimens
for
culture.
Blood
cultures
should
be
performed
in
severe
infections.
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Penicillin
allergy:
• Mild/moderate
infections:
Clindamycin
450
mg
po
8-‐hourly
(add
ciprofloxacin
500mg
po
12-‐hourly
if
requires
admission)
• Severe
infections:
Clindamycin
600
mg
iv
8-‐hourly
PLUS
ciprofloxacin
400
mg
iv
8-‐hourly
Wound
management
Optimal
wound
care
is
essential.
Surgical
consultation
is
recommended
for
the
following
problems:
• Deep
abscess
• Bone
or
joint
involvement
• Crepitus
• Gangrene
• Necrotising
fasciitis
• Severe
vascular
insufficiency
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Necrotising
fasciitis
Definition
(image:
http://medicatoz.com/news/view?id=57)
Acute
severe
infection
involving
subcutaneous
soft
tissues
including
the
fascial
layers.
Usually
precipitated
by
trauma,
surgery,
peri-‐rectal
abscess,
bedsores
or
bowel
perforation.
Common
aetiologies
Usually
polymicrobial
infections:
• Streptococci
• Enterobacteriaceae
• Anaerobes
Tests
Blood
cultures
and
surgical
tissue
specimens.
Diagnosis
and
management
Necrotising
fasciitis
is
commonly
associated
with
systemic
toxicity
manifested
by
fever,
leukocytosis
and
possibly
organ
dysfunction.
It
rapidly
progresses
to
cutaneous
gangrene.
Management
involves
the
following:
1. Early
and
aggressive
surgical
debridement
2. Co-‐amoxiclav
1.2
g
IV
continued
until
clinical
resolution
Alternative
antibiotic
regimens
• If
co-‐amoxiclav
unavailable:
ampicillin
1
g
6-‐hourly
PLUS
metronidazole
500
mg
8-‐hourly
PLUS
gentamicin
6
mg/kg/day,
all
iv
• For
refractory
infections
and
in
penicillin
allergy:
clindamycin
600
mg
8-‐hourly
PLUS
ciprofloxacin
400
mg
8-‐hourly,
both
iv
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Chapter
17
Bone
and
joint
infections
SEPTIC
ARTHRITIS
Definition
Bacterial
joint
infection,
usually
due
to
haematogenous
spread.
Common
aetiologies
• Non-‐gonococcal
o S
aureus
most
common
o Streptococcus
spp.
(S
pyogenes,
S
pneumoniae,
S
agalactiae)
o Gram-‐negative
organisms
(elderly,
immunocompromised,
comorbidities)
• N
gonorrhoeae
Tests
In
all
cases:
• Joint
aspirate
BEFORE
ANTIBIOTICS
o Cell
count
plus
differential:
high
neutrophil
count
in
most
cases
o Gram
stain
and
culture
o Microscopy
for
crystals
• Plain
X-‐ray
Diagnosis
and
management
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OSTEOMYELITIS
Definition
Bacterial
infection
of
bone
due
to
contiguous
spread
from
soft
tissues,
haematogenous
seeding,
or
direct
inoculation.
Common
aetiologies
• Common
– S
aureus
– Coagulase-‐negative
staphylococci
• Occasional
– Streptococci
– Enterococci
– Gram-‐negative
bacilli
• Other
– M
tuberculosis
– Fungal
infections
Tests
• Always
send
specimens
for
culture
– Deep
tissue
specimen:
open
surgical
procedure
or
guided
needle
aspiration
– Blood
culture
• Imaging
– Plain
X-‐ray
in
all
cases
– May
require
other
modalities
such
as
bone
scan,
CT
or
MRI
• CRP
may
be
useful
to
monitor
response
to
therapy
Diagnosis
and
management
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Notes:
• May
need
to
continue
IV
therapy
for
6
weeks
or
longer
• Do
not
add
rifampicin
in
cases
without
foreign
material
• Consider
tuberculosis
if
culture-‐negative
or
no
clinical
improvement
• Vancomycin
is
used
for
health
care-‐associated
osteomyelitis
or
confirmed
MRSA
(loading
dose
23
–
30
mg/kg
followed
by
15
–
20
mg/kg
12-‐hourly;
maintain
trough
levels
15
–
20
mg/mL)
• See
Chapter
18
for
management
of
open
fractures
• Infections
associated
with
prosthetic
material
should
be
discussed
with
an
expert
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Chapter
18
Prophylaxis
Surgery
Surgical
prophylaxis
aims
to
prevent
infection
following
a
predictable
exposure
to
bacteria.
Antibiotics
are
only
required
during
exposure
and
a
single
dose
taken
pre-‐
operatively
is
usually
sufficient.
A
repeat
dose
should
only
be
given
if
surgery
is
prolonged
or
there
is
massive
blood
loss.
Choice
of
antibiotic
depends
on
which
bacteria
are
likely
to
be
introduced
by
the
operation,
usually
normal
colonisers
of
skin
or
bowel.
Examples
are
given
below
but
refer
to
local
policies
for
guidance.
Type
of
surgery
Prophylaxis
Cardiothoracic
Cefazolin
2g
iv
Upper
GI
Neurosurgery
Orthopaedic
(elective
non-‐trauma)
Lower
limb
amputation
Cefazolin
2g
iv
Colorectal
Plus
Biliary
Metronidazole
500mg
iv
Pelvic
ENT
Ophthalmic
Chloramphenicol
0.5%
drops
ERCP
with
obstruction
Ciprofloxacin
500mg
po
2h
prior
to
the
procedure
or
cefuroxime
1.5g
iv
or
PIP/TZ
4.5g
iv,
both
1h
prior
to
the
procedure
Surgery
for
the
implantation
of
any
Cefazolin
2g
iv
or
cefuroxime
1.5g
iv
or
permanent
prosthetic
material
vancomycin
1g
iv
as
single
dose
Penetrating
abdominal
trauma
or
open
Cefazolin
2g
iv
+
metronidazole
500mg
IV
fracture
and
second
dose
if
procedure
>
3h
Head
injuries
Closed
head
injuries
with
non-‐penetrating
wounds
do
not
require
antibiotic
prophylaxis
even
if
there
is
a
CSF
leak.
Compound
depressed
skull
fractures
and
penetrating
spinal
cord
injuries
do
require
prophylaxis/pre-‐emptive
treatment
e.g.
ceftriaxone
plus
metronidazole
for
5
days.
Open
long
bone
fractures
If
early
(<
5
hours)
washout
and
debridement,
provide
prophylaxis
with
cefazolin
1g
iv
12-‐hourly
for
48
hours
only.
If
long
delay
to
washout
or
significant
contamination,
treat
with
coamoxiclav
1.2
g
ivi
12-‐hourly
for
5
days.
Infective
endocarditis
The
evidence
base
is
weak
and
guidelines
are
largely
based
on
expert
opinion,
which
differs
between
countries
and
region.
In
general
only
those
at
the
highest
risk
of
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infective
endocarditis
should
be
offered
prophylaxis
and
then
only
when
the
risk
of
bacteraemia
from
the
procedure
is
high.
Conditions
requiring
prophylaxis
• Significant
congenital
or
acquired
cardiac
abnormalities
• Prosthetic
valves
or
valvular
repair
utilising
prosthetic
material
• Previous
infective
endocarditis
Procedures
requiring
prophylaxis
• Dental
procedures
involving
manipulations
if
the
gingival
or
perapical
region
of
the
teeth
or
perforating
the
oral
mucosa.
Examples
of
regimens
are
given
in
the
table.
Procedure
Regimen
Alternative
Dental,
oral
or
upper
Amoxicillin
3g
po
Clindamycin
600mg
iv
respiratory
tract
Genitourinary,
Ampicillin
2g
iv
Vancomycin
1g
iv
gastrointestinal
or
Plus
gentamicin
1.5mg/kg
Plus
gentamicin
1.5mg/kg
biliary
Rheumatic
fever
• Secondary
prophylaxis
should
be
prescribed
for
all
patients
following
rheumatic
fever
to
prevent
recurrences
Duration
• Without
carditis
5
years
after
last
attack
or
21
years
(whichever
is
longer)
• With
mild
carditis
10
years
after
last
attack
or
21
years
(whichever
is
longer)
• With
carditis
and
residual
heart
disease
10
years
or
until
age
40
(whichever
is
longer).
Sometimes
life-‐long
prophylaxis.
Regimen
• Benzathine
penicillin
1.2MU
IM
every
3-‐4
weeks
or
penicillin
V
250mg
po
12-‐
hourly.
If
penicillin
allergic
azithromycin
250mg
daily.
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