Pag Activity Biology Testing For Biological Molecules Suggestion 1
Pag Activity Biology Testing For Biological Molecules Suggestion 1
Pag Activity Biology Testing For Biological Molecules Suggestion 1
When distributing the activity section to the learners either as a printed copy or as a Word
file you will need to remove the teacher instructions section.
This is a suggested practical activity that can be used as part of teaching the GCSE (9-1)
Gateway Science (A) and Twenty First Century Science (B) specifications.
Further details are available in the specifications (Practical Skills Topics), and in these videos.
OCR recommendations:
Before carrying out any experiment or demonstration based on this guidance, it is the
responsibility of teachers to ensure that they have undertaken a risk assessment in
accordance with their employer’s requirements, making use of up-to-date information and
taking account of their own particular circumstances. Any local rules or restrictions issued
by the employer must always be followed.
Centres should trial experiments in advance of giving them to learners. Centres may choose
to make adaptations to this practical activity, but should be aware that this may affect the
Apparatus and Techniques covered by the learner.
The Jan Ingenhousz experiment - collecting and testing oxygen from submerged plants
Testing leaves of plants for starch
Food testing
Blowing through a straw into lime water
Testing Scenedesmus immobilized in alginate for O2 production
Testing Yeast immobilized in alginate for CO2 production.
Learners will need to be fully prepared for the practical component of the exam. The best way to do
this is to do as many experiments as is practically possible.
This teacher sheet describes methods used to test for the presence of biological molecules in a
range of foods. This has been chosen as the experiments are technically easy, requiring very few
items of specialist equipment and most biology teachers have done them at some time in their
career.
Learners will need to be introduced to the food tests, how they are done and what a positive result
looks like. The example foods listed below provide excellent results and they can be shown as a
demonstration or discovered by the learners’ practical experience.
How to safely use the two methods to heat the reducing sugar test can also be demonstrated
(kettle/thermostatic water bath and Bunsen burner).
Learners should then be allowed to use these tests on more complex foods e.g. a whole meal.
These can be obtained from a school kitchen or from a fast food restaurant. A single meal typically
provides enough material for a class to test. This allows learners to test for foods where the results
are not already obvious before the experiment e.g. fat in oil; but may introduce some interesting
results for example testing a burger bun for fat. Another advantage of using a meal is that the food
is often more ‘colourful’ than the standard examples. Learners can therefore evaluate the results
and use their problem-solving skills to try and find appropriate solutions to testing coloured food.
1 [1]: Use of appropriate apparatus to make and record a range of measurements accurately,
including: v [v]) temperature; vi [vi]) volume of liquids
2 [2]: Safe use of appropriate heating devices and techniques including use of: i) a Bunsen burner;
ii) a water bath OR an electric heater
3 [3]: Use of appropriate apparatus and techniques for the: i) observation of biological changes
and/or processes; ii) measurement of biological changes and/or processes
5 [5]: Measurement of rates of reaction by a variety of methods including: iii) colour change of
indicator
8: Use of appropriate techniques and qualitative reagents to identify biological molecules and
processes in more complex and problem-solving contexts including: i) continuous sampling in an
investigation
Aims
To introduce learners to the food tests by practical experience on simple foods [tests for starch
(using iodine solution), for fat/lipid (using the emulsion test and paper test/grease spot test), for
reducing sugar (using Benedict’s reagent) and for protein (using biuret reagent)].
To allow the learners to investigate the components of a meal using the above tests.
To investigate and monitor changes in biological molecues during the enzymatic digestion of starch
by amylase.
Supplementary practicals
DNA is a biological molecule. Extraction/isolation of a biological molecule can indicate its presence
or absence. Extraction of DNA from a suitable food (e.g. leek) is a suitable example for this PAG
and as such this is included as a supplementary practical.
Links to Specifications:
Twenty First Century
Describe the use of qualitative tests for biological molecules.
Gateway
Explain the importance of sugars in the synthesis and breakdown of carbohydrates to include use of
the terms monomer and polymer.
Describe that DNA is made from four different nucleotides; each nucleotide consisting of a common
sugar and phosphate group with one of four different bases attached to the sugar to include the
pairs of complementary bases (A-T and G-C).
Explain the mechanism of enzyme action to include the role of enzymes in metabolism, the role of
the active site, enzyme specificity (lock and key hypothesis) and factors affecting the rate of enzyme
controlled reactions (pH, temperature, substrate and enzyme concentration).
Compare the processes of aerobic respiration and anaerobic respiration to include in plants/fungi
and animals the different conditions, substrates, products and relative yields of ATP.
Identify factors that need to be controlled, and the ways in which they could be controlled.
Plan experiments or devise procedures by constructing clear and logically sequenced strategies to:
- make observations
- produce or characterise a substance
- test hypotheses
- collect and check data
- explore phenomena.
In a given context evaluate data in terms of accuracy, precision, repeatability and reproducibility,
identify potential sources of random and systematic error, and discuss the decision to discard or
retain an outlier.
Evaluate an experimental strategy, suggest improvements and explain why they would increase the
quality (accuracy, precision, repeatability and reproducibility) of the data collected, and suggest
further investigations.
In a given context interpret observations and other data (presented in diagrammatic, graphical,
symbolic or numerical form) to make inferences and to draw reasoned conclusions, using
appropriate scientific vocabulary and terminology to communicate the scientific rationale for findings
and conclusions.
Apply a knowledge of a range of techniques, instruments, apparatus, and materials to select those
appropriate to the experiment.
Carry out experiments to include due regard to the correct manipulation of apparatus, the accuracy
of measurements and health and safety considerations, and following written instructions.
Make and record observations and measurements using a range of apparatus and methods to
include keeping appropriate records.
For this experiment a range of foods to test will be needed. Care must be taken to avoid foods
containing allergens associated with severe allergies e.g. nuts.
Starch test
Fat/lipid test
Protein test
baby rice 10 g
boiling tubes x2
bungs to fit boiling tubes x2
glass rods x2
washer bottle
plastic cup
Version 1.1 – January 2017 6 © OCR 2017
iodine solution [Lugol’s iodine reagent (I2KI)] in dropping bottle
Benedict’s reagent in dropping bottle
heating device (e.g. kettle/thermostatic water bath or Bunsen burner)
test tubes x5.
Supplementary practical
DNA Extraction
one leek
1 teaspoon salt
tea spoons
washing-up liquid
pre-chilled alcohol (pre-chilled overnight to -20ºC then kept on ice)
pestle
mortar
boiling tube
pineapple juice
inoculation loop
heating device (e.g. kettle/thermostatic water bath or Bunsen burner).
Iodine solution CLEAPSS card 54B – Solutions stronger than 1 mol dm-3 should be labelled harmful.
See also CLEAPSS card 39
Benedict’s reagent contain copper sulphate see CLEAPSS card 27C. See also CLEAPSS card 9.
Biuret reagent contain copper sulphate see CLEAPSS card 27C. See also CLEAPSS card 13.
Biuret solution contains NaOH. Solutions above 0.5 mol dm-3 should be labelled as corrosive, below
0.5 moldm-3 it should be labelled an irritant. 0.5 mol dm-3 equates to a 2% (w/v) solution, therefore
the 1.5% (w/v) recipe stated above should be labelled as an IRRITANT.
Enzyme powders are harmful and some solutions are irritant or allergenic. See CLEAPSS card 23.
Method
Food tests
Add a few drops of iodine solution onto the food. If the iodine turns blue-black then there is
starch present.
NOTE The reason for the reaction is that the iodine fits into the α(1,4) helix in starch causing
the change in colour.
Test 1. Rub the food onto sugar paper (beige works well). Allow the paper to dry. Hold it up
to a suitable source of natural light (e.g. a window). The presence of a fat or lipid means that
the paper remains translucent.
Test 2. Add approx. 1 cm3 of the food to be tested into a boiling tube. Add 5 cm3 of water and
shake. Add approximately 1 cm3 of alcohol (ethanol) to the mix. A white precipitate indicates
the presence of fat/lipid.
The food to be tested is placed into a boiling tube. Add approximately 3cm3 of Benedict’s
reagent to the boiling tube. If using a solid food this may need to be homogenised prior to
testing. Heat the tube – this can be done by placing the tube into a suitable beaker (e.g.250
cm3) and pouring boiling water into the beaker (e.g. from a kettle). A colour change from blue
to green to orange to orange-red through to brick red indicates the presence of reducing
sugars. This is a semi-quantitative test as the further along the colour change the more
reducing sugar is present.
NOTE The colour change is caused by the Cu2+ being reduced to Cu+ (precipitated Cu2O) by
the reducing sugar.
Add to one sample volume add five volumes of biuret reagent to the tube and mix. Leave to
stand. Presence of protein results in a purple colour.
NOTE The purple colour is formed by polypeptides with four or more peptide bonds reacting
with the Copper. The Cu2+ reacting with the lone pair of electrons on the nitrogen.
Always consider combining tests. For example one learner can track the action of amylase on baby
rice paste by looking at the disappearance of starch and the appearance of reducing sugars.
1) Prepare two samples of baby rice paste. These can be made in separate boiling tubes. Mix
with water to a thick consistency using a glass rod.
2) Add a 2 cm3 of amylase either using a prepared solution – but salivary amylase works very,
very well.
3) Add a similar volume of water to the other test tube as a control.
4) Stopper the tubes.
5) Shake/mixing the sample, taking care that the tubes are not hit against anything during this
process.
6) Regularly remove an aliquot to test for starch can be done on a spotting tile and reducing
sugars from both the test and control tubes. Every 2 minutes should be okay.
7) Pour out each tube after 10 minutes shaking – the experiment will be completed when the
paste is liquefied by the enzyme.
This process is very much ‘bucket chemistry’ – exact amounts are not required. The times stated
are a minimum; if these are exceeded this will actually improve the extraction.
1) Using a teaspoon of salt and the pestle and mortar grind a leek leaf to a fine pulp. Do this
until there is no discernible structure of leek leaf.
2) DNA is water soluble so add a small volume of water for the DNA to be extracted to solution
(10 cm3 would be a good start but you want the mix to clearly contain some liquid when the
pestle is tilted. If this has not been achieved then add more water).
3) Mix again with the mortar briefly for approximately 10 seconds.
4) Add a small volume of pineapple juice (10 cm3 would be sufficient), this contains bromelain a
protease and will digest the protein. It is true that the addition of pineapple juice will add
trace pineapple DNA to the sample – but as we are not doing any further analysis of the
DNA this is not problematic here.
5) Mix the solution for approximately 10 seconds.
6) Add a good squirt of washing-up liquid.
7) Pour the liquid into a test tube (filter if required).
8) At this stage heat the solution to 60ºC for ten minutes. During this process you can explain
the role of each step.
9) Cool the tube on ice for a few minutes.
Notes
Please note that the sample obtained from leek is superior to that obtained from kiwi or other
sources. Leek provides DNA of high quality and has the appearance of nucleic obtained from CsCl
ultracentrifigation. It also has the advantage that a single leek can provide all the material required
for an entire class.
NOTE many of these reagents are adapted from CLEAPSS. Please use the CLEAPSS cards for
more detailed descriptions on how to make. The Biuret solution described here has been adapted
from Gornall et al. (1949).
Food tests
A selection of foods (bag of pasta, bag of potatos, bread, small bottle of cooking oil)
A meal (school dinner/takeaway meal)
Benedict’s reagent in dropping bottles (x15) [7.5% (w/v) anhydrous or 16% (w/v) hydrated
sodium carbonate, 20% (w/v) trisodium citrate dihydrate, 12.5% potassium thiocyanate 1.8%
(w/v) copper (II) sulphate (VI), 0.025% potassium hexacyanoferrate (II). Method:
- Dissolve the sodium carbonate, sodium citrate, and potassium thiocyanate in 700 cm3 of
boiled distilled water.
- Dissolve the copper sulphate in 100 cm3 of boiled distilled water.
- Mix the two solutions together
- Pour over the potassium thiocyanate
- Make up to 1 litre with the boiled distilled water
Biuret reagent in dropping bottles (x15) [1.5% (w/v) sodium hydroxide NaOH, 0.2% (w/v)
copper sulphate CuSO4·5H2O, 0.6% (w/v) potassium sodium tartrate KNaC4H4O6·4H2O].This
is an adapted solution from Gornall, A.G., Bardawill, C. J. and David, M. M. (1949)
Determination of Serum Proteins by means of the Biuret Reaction. J. Biol. Chem. 177; 751.
Note if preparing a stock addition of 0.1% (w/v) potassium iodine and keeping in the dark
improves the storage time significantly.
Iodine solution/[Lugol’s iodine reagent (I2KI)] in dropping bottles (x15) [potassium iodide 10%
(w/v), iodine 5% (w/v)]
Ethanol 150 cm3
Sugar paper cut into 10cm squares
Beakers (x15)
Spotting tiles (x15)
Test tubes x2 per food sample
Kettle or thermostatic water bath
Bunsen burner (x15)
Heat proof mats (x15)
Bunsen burner lighter
Tripod (x15)
Gauze (x15)
One leek
Salt 1 cup
Tea spoons (x15)
Washing-up liquid 1 bottle
Pre-chilled alcohol 250 cm3 (pre-chilled overnight to -20ºC then kept on ice)
Pestle (x15)
Mortar (x15)
Boiling tubes (x15)
Pineapple juice 200 cm3 carton
Inoculation loop (x15)
Kettle or thermostatic water bath
Bunsen burner (x15)
Heat proof mats (x15)
Bunsen burner lighter
Tripod (x15)
Gauze (x15)
A Emulsion test
B Benedict’s test
2. Using the biuret test what colour would indicate a positive test for protein?
[1 mark]
A Blue-black
B Purple
C White
D Brick red
Your answer B
3. An experiment is done to test the fat content of a variety of milks. The scientists use the
sudan red test rather than the emulsion test. Can you suggest why the scientists decided to
use this test? [2 marks]
Milk is white the result for a positive emulsion test is white accept sudan red is red
and can be detected in a white food/owtte
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Introduction
Any molecule produced in a cell, tissue or organism is classed as a biological molecule. This can
include simple molecules like water and carbon dioxide, more complex molecules like glucose
through to large complex polymers like DNA, proteins and carbohydrates.
In this activity you will have the chance to identify what biological molecules are found in a variety
of foods.
Aims
To use the diagnostic test for starch
DNA extraction
one leek
1 teaspoon salt
tea spoon
washing-up liquid
pre-chilled alcohol (pre-chilled overnight to -20ºC then kept on ice)
pestle
mortar
boiling tube
pineapple juice
inoculation loop
heating device (e.g. kettle/thermostatic water bath or Bunsen burner).
Biuret solution contains NaOH. Low concentrations NaOH it is an irritant but at higher
concentrations it is corrosive – look at any labelling on the dropper bottle.
Ethanol is highly flammable. Do not use this near a naked flame (e.g. Bunsen burner).
Test 1. Rub the food onto sugar paper (beige works well). Allow the paper to dry. Hold it up
to a suitable source of natural light (e.g. a window).
The presence of a fat or lipid means that the paper remains translucent.
Test 2. Add approx. 1 cm3 of the food to be tested into a boiling tube. Add 5 cm3 of water
and shake. Add approximately 1 cm3 of alcohol (ethanol) to the mix.
A colour change from blue to green to orange to orange-red through to brick red indicates
the presence of reducing sugars. Note this is a semi-quantitative test as the further along
the colour change the more reducing sugar is present.
Add to one sample volume add five volumes of biuret reagent to the tube.
Add a clean bung to the tube.
Mix vigorously.
Leave to stand for a minute.
This activity will enable you to monitor a reaction during the experiment. Baby rice is essentially
powdered rice (starch). Action of amylase will digest the starch into simple sugars. Design an
experiment to monitor this process. During this experiment you will need to work out the ideal
volumes and masses of materials required. You will also need to work out how to control the
variables in the experiment.
This process is very much ‘bucket chemistry’ – exact amounts are not required. The times stated
are a minimum; if these are exceeded this will actually improve the extraction
1) Using a teaspoon of salt and the pestle and mortar grind a leek leaf to a fine pulp. Do this
until there is no discernible structure of leek leaf.
2) DNA is water soluble so add a small volume of water for the DNA to be extracted to
solution (10 cm3 would be a good start but you want the mix to clearly contain some liquid
when the pestle is tilted. If this has not been achieved then add more water).
3) Mix again with the mortar briefly for approximately 10 seconds.
4) Add a small volume of pineapple juice (10 cm3 would be sufficient), this contains bromelain
an enzyme that digests protein. Is this a good idea?
5) Mix the solution for approximately 10 seconds.
6) Add a good squirt of washing-up liquid.
7) Pour the liquid into a test tube.
8) At this stage heat the solution to 60 ºC for ten minutes. During this process you can explain
the role of each step.
9) Cool the tube on ice for a few minutes.
10) Add pre-chilled alcohol you can use any here as long as it is of sufficient strength. I have
used methylated spirits, IMS, 96% ethanol. It even works well with Gin.
11) Over the next minute the DNA will be precipitating out of solution. Please note that the DNA
cannot be seen as fluffy white precipitate here, but rather a collection of immobilized
bubbles in solution.
Results
Record your results in a suitable table. Indicate what biological molecule the food contains and
devise a method to indicate the relative amounts of each biological molecule.
A Emulsion test
B Benedict’s test
Your answer
2. Using the biuret test what colour would indicate a positive test for protein?
[1 mark]
A Blue-black
B Purple
C White
D Brick red
Your answer
3. An experiment is done to test the fat content of a variety of milks. The scientists use the
sudan red test rather than the emulsion test. Can you suggest why the scientists decided to
use this test? [2 marks]